; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1739 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1739
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein S19
Genome locationMC04:24823213..24824597
RNA-Seq ExpressionMC04g1739
SyntenyMC04g1739
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001266 - Ribosomal protein S19e
IPR018277 - Ribosomal protein S19e, conserved site
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134553.1 40S ribosomal protein S19-3 [Momordica charantia]1.73e-99100Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022150295.1 40S ribosomal protein S19-3-like [Momordica charantia]8.23e-9898.6Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHIL QLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022923365.1 40S ribosomal protein S19-3-like [Cucurbita moschata]2.36e-9797.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022938991.1 40S ribosomal protein S19-3 [Cucurbita moschata]6.77e-9797.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGR+ITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022954406.1 40S ribosomal protein S19-3-like [Cucurbita moschata]6.77e-9797.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

TrEMBL top hitse value%identityAlignment
A0A6J1C2B0 40S ribosomal protein S19-38.36e-100100Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1D839 40S ribosomal protein S19-3-like3.98e-9898.6Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHIL QLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1EBL3 40S ribosomal protein S19-3-like1.14e-9797.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTL0 40S ribosomal protein S19-3-like1.14e-9797.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTW8 40S ribosomal protein S19-3-like3.28e-9797.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

SwissProt top hitse value%identityAlignment
P40978 40S ribosomal protein S192.0e-6381.43Show/hide
Query:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIA
        +TA+TVKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKTARFKEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG QRNGSRPPHFCKSSGAI+
Subjt:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIA

Query:  RHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVV
        R+ILQQLQ+M I+DVD KGGR ITS GRRDLDQVAGR+ V
Subjt:  RHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVV

Q94613 40S ribosomal protein S195.5e-4557.46Show/hide
Query:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHIL
        +VKDVS HEF +A+AA LK+SGK+++P WTD VKT  FKEL+PY+PDWY++RAAS+ R +Y+R   G+G+F++IYGG +R G+ P HFCK++G+I+R +L
Subjt:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHIL

Query:  QQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        Q L+ + IV+ D  GGRR+TS GRRDLD++A +I
Subjt:  QQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

Q9FNP8 40S ribosomal protein S19-34.9e-7087.32Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+DTKGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA

Q9LF30 40S ribosomal protein S19-22.7e-6887.77Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++DTKGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

Q9SGA6 40S ribosomal protein S19-16.4e-7086.01Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++DTKGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

Arabidopsis top hitse value%identityAlignment
AT3G02080.1 Ribosomal protein S19e family protein4.6e-7186.01Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++DTKGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

AT5G15520.1 Ribosomal protein S19e family protein1.9e-6987.77Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++DTKGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

AT5G61170.1 Ribosomal protein S19e family protein3.5e-7187.32Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+DTKGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACAT
AGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGG
GGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCACCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATACCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACAT
AGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGG
GGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCACCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATACCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCT
Protein sequenceShow/hide protein sequence
MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQE
MNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP