; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1825 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1825
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein S26
Genome locationMC04:25514001..25514744
RNA-Seq ExpressionMC04g1825
SyntenyMC04g1825
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016042.1 40S ribosomal protein S26-3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.34e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

KOM40682.1 hypothetical protein LR48_Vigan04g088000, partial [Vigna angularis]7.52e-7197.17Show/hide
Query:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
        +QTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY+QYTLPKLY KMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
Subjt:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ

Query:  RFIRRR
        RFIRRR
Subjt:  RFIRRR

KYP69479.1 40S ribosomal protein S26-1, partial [Cajanus cajan]8.29e-7197.17Show/hide
Query:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
        +QTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY+QYTLPKLY KMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
Subjt:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ

Query:  RFIRRR
        RFIRRR
Subjt:  RFIRRR

XP_022134511.1 40S ribosomal protein S26-1-like [Momordica charantia]4.95e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

XP_022939944.1 40S ribosomal protein S26-3-like [Cucurbita moschata]5.29e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

TrEMBL top hitse value%identityAlignment
A0A0L9UDQ7 40S ribosomal protein S26 (Fragment)3.64e-7197.17Show/hide
Query:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
        +QTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY+QYTLPKLY KMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
Subjt:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ

Query:  RFIRRR
        RFIRRR
Subjt:  RFIRRR

A0A151TR17 40S ribosomal protein S26 (Fragment)4.02e-7197.17Show/hide
Query:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
        +QTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY+QYTLPKLY KMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ
Subjt:  VQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQ

Query:  RFIRRR
        RFIRRR
Subjt:  RFIRRR

A0A6J1BXZ8 40S ribosomal protein S262.40e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

A0A6J1FIL8 40S ribosomal protein S262.56e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

A0A6J1K0V7 40S ribosomal protein S262.56e-71100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
        IRRR
Subjt:  IRRR

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S261.6e-3670.87Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR R+PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRR
         +R
Subjt:  IRR

P49206 40S ribosomal protein S26-18.4e-4685.58Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR

P49216 40S ribosomal protein S263.2e-4582.52Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR R PP+RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRR
         RR
Subjt:  IRR

Q8LPJ7 40S ribosomal protein S26-28.4e-4685.58Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR

Q9LYK9 40S ribosomal protein S26-32.2e-4686.54Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein6.0e-4785.58Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR

AT2G40590.1 Ribosomal protein S26e family protein6.0e-4785.58Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR

AT3G56340.1 Ribosomal protein S26e family protein1.6e-4786.54Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRR
         RR+
Subjt:  IRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCTTTTGGTTCAGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGA
CAAGGCCATCAAGAGGTTCCTTGTCAGGAACATCGTGGAGCAGGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTCTATGATCAGTACACTCTTCCTAAGCTGTATGCTA
AGATGCAGTACTGCGTTTCCTGTGCCATTCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAAGCGTGATCCTCCACAGCGCTTCATTAGACGCAGG
mRNA sequenceShow/hide mRNA sequence
TATCTTTTGGTTCAGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGA
CAAGGCCATCAAGAGGTTCCTTGTCAGGAACATCGTGGAGCAGGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTCTATGATCAGTACACTCTTCCTAAGCTGTATGCTA
AGATGCAGTACTGCGTTTCCTGTGCCATTCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAAGCGTGATCCTCCACAGCGCTTCATTAGACGCAGG
Protein sequenceShow/hide protein sequence
YLLVQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRR