CuGenDBv2

Gene ID	MC04g1833
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cell wall protein RBR3-like isoform X2
Genome location	MC04:25565175..25567754
RNA-Seq Expression	MC04g1833
Synteny	MC04g1833
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022134148.1 uncharacterized protein LOC111006488 isoform X1 [Momordica charantia]

1.44e-152

88.56

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKV-------PNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        PSKARTVPCKK        P  + RQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
Subjt:  PSKARTVPCKKV-------PNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

XP_022134149.1 uncharacterized protein LOC111006488 isoform X2 [Momordica charantia]

2.54e-120

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKK
        PSKARTVPCKK
Subjt:  PSKARTVPCKK

XP_022134150.1 uncharacterized protein LOC111006488 isoform X3 [Momordica charantia]

5.21e-152

90.53

Show/hide

Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        PSKARTVPCKK      RQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
Subjt:  PSKARTVPCKKVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

XP_022134151.1 uncharacterized protein LOC111006488 isoform X4 [Momordica charantia]

8.01e-121

90.57

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKV
        PSKARTVPCKK+
Subjt:  PSKARTVPCKKV

XP_038884347.1 uncharacterized protein LOC120075210 isoform X1 [Benincasa hispida]

1.14e-109

74.8

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        ME+ KR LRARKPL+DCTNT+LSSQSSASNFS+ IKPR+RVIKSAVKD VNNEKK +    S S S+NL+ASNPSSD LPTEP  +SD  P EPN S+D 
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNAKPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSSPSKARTVPCKKVPNFLQR
        LP+EP    SSS LP E STP RRADLPSSSGTDRVSEPQSFYSRR PTNKRKS EIA  PFIF+T+SKI T G KR+GY SPSKA+TVPCKK+  F QR
Subjt:  LPTEPNAKPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSSPSKARTVPCKKVPNFLQR

Query:  QRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        QR T+Y +DES IELPREFVE+QKAYFSEVDAF+L VEEAKSSDSE
Subjt:  QRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BX51 uncharacterized protein LOC111006488 isoform X4

3.88e-121

90.57

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKV
        PSKARTVPCKK+
Subjt:  PSKARTVPCKKV

A0A6J1BXA7 uncharacterized protein LOC111006488 isoform X3

2.52e-152

90.53

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        PSKARTVPCKK      RQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
Subjt:  PSKARTVPCKKVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

A0A6J1BXZ7 uncharacterized protein LOC111006488 isoform X2

1.23e-120

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKK
        PSKARTVPCKK
Subjt:  PSKARTVPCKK

A0A6J1C164 uncharacterized protein LOC111006488 isoform X1

6.97e-153

88.56

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
        LPTEPNA                  +PSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS
Subjt:  LPTEPNA------------------KPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSS

Query:  PSKARTVPCKKV-------PNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        PSKARTVPCKK        P  + RQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
Subjt:  PSKARTVPCKKV-------PNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

A0A6J1JRU8 uncharacterized protein LOC111487776 isoform X1

1.09e-108

74.39

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Query:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC
        ME+ KRNLR RKPL+DCTNTVLSSQSSASN S+ IKPR+RV+K AVKD VNNEK+G SSF SAS S+NLQASNPSSD LPT+P  SS+  P E   +SD 
Subjt:  MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDC

Query:  LPTEPNAKPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSSPSKARTVPCKKVPNFLQR
        LPTEP    SSSSLPAE STP+R  DLPSSSGTDRV EPQSFYSRRHP N+RKSTE A  PF+F+TASKI T GEKR   SSPS+ARTVP      + +R
Subjt:  LPTEPNAKPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSSPSKARTVPCKKVPNFLQR

Query:  QRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
        QRGTIYG+DESKIELPREFVEKQKAYFSEVDAF+L+VEEAKSSDSE
Subjt:  QRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G56250.1 unknown protein

1.2e-07

30.71

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Query:  MEAPKR--NLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSS
        MEAP+       RKPL+DCTNTV  S+SS  + SSV                   K    S TS+   L  Q +       P + N S+    T P  +S
Subjt:  MEAPKR--NLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSS

Query:  DCLPTE--PNAKPSSSSLPAEASTPTRRADLPSSSGTD--RVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASK--IHTMGEKRDGYSSPSKARTVPCK
          + T+  P  +  S+ L + AS P+R     S  G      +EP S Y+ R   + +K ++ A +    A   +  + +   K+   +S +K +T+  K
Subjt:  DCLPTE--PNAKPSSSSLPAEASTPTRRADLPSSSGTD--RVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASK--IHTMGEKRDGYSSPSKARTVPCK

Query:  KVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE
          P   +RQR     K++      ++++EKQKAYF+E+DAF+L VEE  +SDS+
Subjt:  KVPNFLQRQRGTIYGKDESKIELPREFVEKQKAYFSEVDAFDLVVEEAKSSDSE

Sequences

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CDS sequence

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ATGGAAGCCCCGAAGCGAAATCTCAGAGCTCGAAAACCCCTCTCAGATTGTACCAACACCGTCCTCTCCTCGCAATCGTCGGCATCGAATTTTTCCTCTGTAATCAAACC
CCGGAGACGTGTAATCAAGTCCGCGGTTAAAGATGCTGTCAACAATGAGAAGAAAGGCGAATCAAGTTTTACGTCTGCATCCGCATCCCTTAATTTGCAAGCTTCAAACC
CTAGTTCTGATTGTCTTCCTACAGAACCAAACCCTAGTTCTGATTGTCTTCCTACTGAACCAAACTCCAGTTCTGATTGTCTTCCTACTGAACCAAACGCTAAACCTAGT
TCTAGTTCTCTTCCTGCAGAAGCTTCTACTCCTACGCGGCGCGCAGATTTGCCGTCTAGTTCAGGAACAGATCGTGTTTCGGAGCCCCAGTCATTCTACAGTAGGAGGCA
CCCTACAAATAAAAGGAAGAGCACGGAGATAGCATTTACACCATTTATTTTCGCTACCGCATCAAAAATCCATACCATGGGTGAGAAAAGAGATGGATACAGCAGCCCAT
CCAAAGCGAGGACCGTTCCGTGTAAAAAGGTCCCTAATTTTTTGCAGAGGCAACGTGGAACAATATATGGAAAAGATGAGTCCAAGATTGAGCTTCCACGGGAATTTGTT
GAGAAGCAGAAAGCATATTTTTCAGAAGTAGATGCATTTGATCTAGTGGTAGAGGAGGCTAAATCATCCGACTCGGAG

mRNA sequence

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Protein sequence

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MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSFTSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNAKPS
SSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPFIFATASKIHTMGEKRDGYSSPSKARTVPCKKVPNFLQRQRGTIYGKDESKIELPREFV
EKQKAYFSEVDAFDLVVEEAKSSDSE

MC04g1833 (gene) of Bitter gourd (Dali-11) v1 genome