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MC04g1902 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1902
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCytoplasmic tRNA 2-thiolation protein 1
Genome locationMC04:26052445..26052645
RNA-Seq ExpressionMC04g1902
SyntenyMC04g1902
Gene Ontology termsGO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY18099.1 Cytoplasmic tRNA 2-thiolation protein 1 [Theobroma cacao]3.30e-3080.7Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH
        SFFQMPLHYPRY++KDY+DMPEWKLDRLLA+YGL   GDL +KR+FAMGAFLWP+FH
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH

KAF3433650.1 hypothetical protein FNV43_RR24753 [Rhamnella rubrinervis]1.68e-3076.19Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLN
        SFFQMPLHYPRY++KDY+DMPEWKLDRLLADYGL   GDL +KR FAMGAFLWP FH  + L+
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLN

KAG6578420.1 hypothetical protein SDJN03_22868, partial [Cucurbita argyrosperma subsp. sororia]2.78e-3272.22Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH-----HPSLLNKKLI
        +FFQMPLHYPRYSK DYE+MPEWKLDRLL +YGLPT G+LP+KR+FAMGAFLW ++H      PSLLN KL+
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH-----HPSLLNKKLI

OMO76642.1 hypothetical protein COLO4_25500 [Corchorus olitorius]5.48e-3080.7Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH
        SFFQMPLHYPRY+KKDY++M EWK+DRLLADYGL T GDL +KR+FAMGAFLWP+FH
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH

XP_040869322.1 uncharacterized protein LOC121174311, partial [Glycine max]8.17e-3375.76Show/hide
Query:  FFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLNKKLI
        FFQMPLHYPRY++KDY+DMPEWKLDRLL +YGLPT GDL +KR FAMGAFLWP   H  L NKK+I
Subjt:  FFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLNKKLI

TrEMBL top hitse value%identityAlignment
A0A061FTQ6 Cytoplasmic tRNA 2-thiolation protein 11.60e-3080.7Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH
        SFFQMPLHYPRY++KDY+DMPEWKLDRLLA+YGL   GDL +KR+FAMGAFLWP+FH
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH

A0A1R3I234 Uncharacterized protein2.65e-3080.7Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH
        SFFQMPLHYPRY+KKDY++M EWK+DRLLADYGL T GDL +KR+FAMGAFLWP+FH
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH

A0A2P5ALC9 Uncharacterized protein6.05e-3072.46Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPE---FHHPSLLNKKL
        S+FQMPLHYPRY+KKDY+DMPEWKLDRLLA+YGL T GDL +KR FA+GAFLWP+   F   SLL+KK+
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPE---FHHPSLLNKKL

A0A6A3BSS0 Mannose-1-phosphate guanylyltransferase 1-like5.51e-3082.14Show/hide
Query:  FFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH
        FFQMPLHYPRY+ KDY DMPEWKLDRLLA+YGL   GDL +KRRFAMGAFLWP+FH
Subjt:  FFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFH

W9SNS4 Uncharacterized protein3.38e-3076.67Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPS
        S+FQMPLHYPRY+K+DY+DMPEWKLD+LLA YGLPT GDL +KR FA+GAFLWP+FH  S
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein1.4e-1459.02Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGD--LPFKRRFAMGAFLWPEFHHP
        S F+MPLHYPRY+K+DYE+M EW+LD LL++YGL    D  L  KR FA+  F+WP  HHP
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGD--LPFKRRFAMGAFLWPEFHHP

AT3G11405.1 unknown protein3.8e-1261.11Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTS-GDLPFKRRFAMGAFLW
        S FQMPL YP Y+K+ Y+ M E +LDRLL  YGLPT  G+L  K+ FA+GAFLW
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTS-GDLPFKRRFAMGAFLW

AT3G55570.1 unknown protein1.1e-2268.66Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLNKKLI
        S F+MPLHYPRYSK+DY+DMPEWKLDR+LADYGL T GDL  KR FA+GAFLW    +P L  +K I
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLNKKLI

AT5G41761.1 unknown protein6.1e-1869.81Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLW
        S FQ+PLHYP+Y+K DYE MPEW+LDRLL +YGLP  GD   KR+FA+GAFLW
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLW

AT5G55620.1 unknown protein2.9e-1256.36Show/hide
Query:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPE
        S FQ+PLHYP+YSK DYE M + +LD LL  YG    G L  KR FA+ +FLWP+
Subjt:  SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTTCTTTCAAATGCCCCTTCACTATCCTAGATACTCGAAGAAGGACTACGAGGACATGCCTGAATGGAAGCTCGACCGCCTCCTCGCCGACTACGGCCTCCCGACCTC
GGGTGACTTGCCCTTCAAACGCCGCTTCGCCATGGGTGCATTCCTCTGGCCTGAGTTCCACCATCCCTCTCTTCTCAACAAAAAACTCATC
mRNA sequenceShow/hide mRNA sequence
AGCTTCTTTCAAATGCCCCTTCACTATCCTAGATACTCGAAGAAGGACTACGAGGACATGCCTGAATGGAAGCTCGACCGCCTCCTCGCCGACTACGGCCTCCCGACCTC
GGGTGACTTGCCCTTCAAACGCCGCTTCGCCATGGGTGCATTCCTCTGGCCTGAGTTCCACCATCCCTCTCTTCTCAACAAAAAACTCATC
Protein sequenceShow/hide protein sequence
SFFQMPLHYPRYSKKDYEDMPEWKLDRLLADYGLPTSGDLPFKRRFAMGAFLWPEFHHPSLLNKKLI