; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g1953 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1953
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein
Genome locationMC04:26333183..26333551
RNA-Seq ExpressionMC04g1953
SyntenyMC04g1953
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC33378.1 hypothetical protein L484_010788 [Morus notabilis]8.75e-1745.83Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS
        SR  ++LSSMI+ +L++PP PIP  I  SS +A +  S+       ++ASP  FASLF+ IS+AL+LFG++   IGF+L+PL++ ++LLFY   ++  LS
Subjt:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS

Query:  NFARSLLCPY--PKHVSAGE
           RS+L P   P+HVSAG+
Subjt:  NFARSLLCPY--PKHVSAGE

KAE8021313.1 hypothetical protein FH972_007215 [Carpinus fangiana]1.60e-1746.22Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF
        S   Y+L SMIV +LR PP P P          FP+  ++   + + SPA F SLF+ IS+AL+LFG++   IGF+L+PL+I ++LLFYF   VSILS F
Subjt:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF

Query:  ARSLLCPY--PKHVSAGEF
         RS+LCP   PK+  A  +
Subjt:  ARSLLCPY--PKHVSAGEF

XP_022134096.1 uncharacterized protein LOC111006451 [Momordica charantia]8.38e-66100Show/hide
Query:  RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS
        RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS
Subjt:  RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS

Query:  ILSNFARSLLCPYPKHVSA
        ILSNFARSLLCPYPKHVSA
Subjt:  ILSNFARSLLCPYPKHVSA

XP_024031813.1 uncharacterized protein LOC21394073 isoform X2 [Morus notabilis]2.17e-1645.83Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS
        SR  ++LSSMI+ +L++PP PIP  I  SS +A +  S+       ++ASP  FASLF+ IS+AL+LFG++   IGF+L+PL++ ++LLFY   ++  LS
Subjt:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS

Query:  NFARSLLCPY--PKHVSAGE
           RS+L P   P+HVSA E
Subjt:  NFARSLLCPY--PKHVSAGE

XP_024031814.1 uncharacterized protein LOC21394073 isoform X3 [Morus notabilis]8.47e-1645Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS
        SR  ++LSSMI+ +L++PP PIP  I  SS +A +  S+       ++ASP  FASLF+ IS+AL+LFG++   IGF+L+PL++ ++LLFY   ++  LS
Subjt:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS

Query:  NFARSLLCPY--PKHVSAGE
           RS+L P   P+HVSA +
Subjt:  NFARSLLCPY--PKHVSAGE

TrEMBL top hitse value%identityAlignment
A0A2P5CJR4 Transmembrane protein4.26e-1441.79Show/hide
Query:  RRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTA--GSFPS--KHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFN
        + + SR  Y+LSSMI+ +L+ PP  IP   +      G+ PS   H+L    S  SPA FASLF+ IS+AL+LFG++  +IGF+L+PL++ ++LLFY   
Subjt:  RRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTA--GSFPS--KHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFN

Query:  VVSILSNFARSLLCP--------YPKHVSAGEFL
        ++  LS   RS+LCP         P+HV+   FL
Subjt:  VVSILSNFARSLLCP--------YPKHVSAGEFL

A0A5N6QUQ1 Uncharacterized protein7.74e-1846.22Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF
        S   Y+L SMIV +LR PP P P          FP+  ++   + + SPA F SLF+ IS+AL+LFG++   IGF+L+PL+I ++LLFYF   VSILS F
Subjt:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF

Query:  ARSLLCPY--PKHVSAGEF
         RS+LCP   PK+  A  +
Subjt:  ARSLLCPY--PKHVSAGEF

A0A6I9UFL0 uncharacterized protein LOC1051774421.22e-1447.32Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF
        +R  Y+L SMI+ +LR PP PI   + SL + S PS  S  +  +  SPA F SLFI IS+AL+LFG++  +IG +L+PL+IT++LLFYF  +VS LS  
Subjt:  SRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNF

Query:  ARSLLCPYPKHV
         R +L P P  +
Subjt:  ARSLLCPYPKHV

A0A6J1BX03 uncharacterized protein LOC1110064514.06e-66100Show/hide
Query:  RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS
        RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS
Subjt:  RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVS

Query:  ILSNFARSLLCPYPKHVSA
        ILSNFARSLLCPYPKHVSA
Subjt:  ILSNFARSLLCPYPKHVSA

W9SAM7 Uncharacterized protein4.24e-1745.83Show/hide
Query:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS
        SR  ++LSSMI+ +L++PP PIP  I  SS +A +  S+       ++ASP  FASLF+ IS+AL+LFG++   IGF+L+PL++ ++LLFY   ++  LS
Subjt:  SRASYQLSSMIVDVLRIPPFPIP--ILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILS

Query:  NFARSLLCPY--PKHVSAGE
           RS+L P   P+HVSAG+
Subjt:  NFARSLLCPY--PKHVSAGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein1.5e-0938.21Show/hide
Query:  RRRDD--SRASYQLSSMIVDVLRIPPFPIPI----------LASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLIT
        R+RD+  SR  Y LSS+++++LR PP PI +          +    ++  F S    LA     SP+ FASL + IS+AL+L G++   IGFLL+P ++ 
Subjt:  RRRDD--SRASYQLSSMIVDVLRIPPFPIPI----------LASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLIT

Query:  VLLLFYFFNVVSILSNFARSLLC
        ++L+FY   +VS +S   RS+LC
Subjt:  VLLLFYFFNVVSILSNFARSLLC

AT1G27290.2 unknown protein1.5e-0938.21Show/hide
Query:  RRRDD--SRASYQLSSMIVDVLRIPPFPIPI----------LASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLIT
        R+RD+  SR  Y LSS+++++LR PP PI +          +    ++  F S    LA     SP+ FASL + IS+AL+L G++   IGFLL+P ++ 
Subjt:  RRRDD--SRASYQLSSMIVDVLRIPPFPIPI----------LASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLIT

Query:  VLLLFYFFNVVSILSNFARSLLC
        ++L+FY   +VS +S   RS+LC
Subjt:  VLLLFYFFNVVSILSNFARSLLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCGACGAGACGATTCTAGGGCTTCTTACCAGCTCTCCTCCATGATCGTCGACGTCCTCAGAATCCCTCCCTTCCCGATCCCCATCCTCGCCTCCTCCCTCACCGCCGG
ATCTTTCCCGTCCAAGCACAGCCTCCTCGCCCTCACCTCCAGTGCCTCTCCGGCGGTCTTCGCCTCGCTTTTCATCGCGATTTCCATGGCTTTGATTCTCTTCGGAACCA
TCGCCCTCATGATTGGATTCCTGTTGGTTCCTCTCCTCATTACCGTGCTCCTTCTCTTCTACTTCTTCAACGTGGTTTCCATTCTGTCCAATTTTGCTCGCTCGCTGCTC
TGCCCCTACCCTAAACATGTTTCCGCCGGTGAATTTCTC
mRNA sequenceShow/hide mRNA sequence
CGTCGACGAGACGATTCTAGGGCTTCTTACCAGCTCTCCTCCATGATCGTCGACGTCCTCAGAATCCCTCCCTTCCCGATCCCCATCCTCGCCTCCTCCCTCACCGCCGG
ATCTTTCCCGTCCAAGCACAGCCTCCTCGCCCTCACCTCCAGTGCCTCTCCGGCGGTCTTCGCCTCGCTTTTCATCGCGATTTCCATGGCTTTGATTCTCTTCGGAACCA
TCGCCCTCATGATTGGATTCCTGTTGGTTCCTCTCCTCATTACCGTGCTCCTTCTCTTCTACTTCTTCAACGTGGTTTCCATTCTGTCCAATTTTGCTCGCTCGCTGCTC
TGCCCCTACCCTAAACATGTTTCCGCCGGTGAATTTCTC
Protein sequenceShow/hide protein sequence
RRRDDSRASYQLSSMIVDVLRIPPFPIPILASSLTAGSFPSKHSLLALTSSASPAVFASLFIAISMALILFGTIALMIGFLLVPLLITVLLLFYFFNVVSILSNFARSLL
CPYPKHVSAGEFL