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MC04g1975 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g1975
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Genome locationMC04:26532182..26532277
RNA-Seq ExpressionMC04g1975
SyntenyMC04g1975
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF34771.1 conserved hypothetical protein [Ricinus communis]3.78e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
ERN16284.1 hypothetical protein AMTR_s00063p00185460 [Amborella trichopoda]1.37e-0784.38Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLFN
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
KAE9610927.1 Photosystem I P700 chlorophyll a apoprotein A1 [Lupinus albus]4.29e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
PHT73206.1 hypothetical protein T459_23991 [Capsicum annuum]4.66e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
WP_201741889.1 hypothetical protein, partial [Muricauda alvinocaridis]4.12e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
TrEMBL top hitse value%identityAlignment
A0A1J3DGQ0 Uncharacterized protein (Fragment)1.20e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
A0A4S8RDS7 Photosystem I core protein PsaA (Fragment)1.99e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
A0A6A4QAG6 Photosystem I P700 chlorophyll a apoprotein A12.08e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
B9SNR3 Uncharacterized protein1.83e-0781.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
U5D1H4 Uncharacterized protein6.61e-0884.38Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLFN
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
SwissProt top hitse value%identityAlignment
A1EA08 Photosystem I P700 chlorophyll a apoprotein A11.1e-0681.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
A4QJB5 Photosystem I P700 chlorophyll a apoprotein A11.1e-0681.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A11.1e-0681.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
Q3V534 Photosystem I P700 chlorophyll a apoprotein A11.1e-0681.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
Q70Y03 Photosystem I P700 chlorophyll a apoprotein A11.1e-0681.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
Arabidopsis top hitse value%identityAlignment
ATCG00350.1 Photosystem I, PsaA/PsaB protein7.9e-0881.25Show/hide
Query:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN
        VIQSYGSSLS Y  FFLG HFVW FSLMFLF+
Subjt:  VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAATTCAGTCTTATGGATCTTCATTATCTACATATGACTTCTTTTTCCTAGGTACTCATTTTGTATGGACTTTTAGTTTAATGTTTCTATTCAAC
mRNA sequenceShow/hide mRNA sequence
GTAATTCAGTCTTATGGATCTTCATTATCTACATATGACTTCTTTTTCCTAGGTACTCATTTTGTATGGACTTTTAGTTTAATGTTTCTATTCAAC
Protein sequenceShow/hide protein sequence
VIQSYGSSLSTYDFFFLGTHFVWTFSLMFLFN