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MC05g0026 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0026
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationMC05:244037..244297
RNA-Seq ExpressionMC05g0026
SyntenyMC05g0026
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]4.90e-3886.75Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GGG PQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

XP_022144306.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]8.37e-46100Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]6.96e-3887.95Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GG APQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]8.46e-3989.16Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GGGAPQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]2.05e-3888.1Show/hide
Query:  RMGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        RM  GG APQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  RMGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y8 Protein transport protein Sec61 subunit beta2.37e-3886.75Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GGG PQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

A0A6J1CT03 Protein transport protein Sec61 subunit beta4.05e-46100Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta3.37e-3887.95Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GG APQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

A0A6J1GEY3 Protein transport protein Sec61 subunit beta4.10e-3989.16Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GGGAPQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

A0A6J1IH25 Protein transport protein Sec61 subunit beta4.10e-3989.16Show/hide
Query:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA
        M  GGGAPQRGSAAATASMRRRR+TSS  TSGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV+ILHVMGKLYFVRREA
Subjt:  MGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta1.0e-0645.95Show/hide
Query:  GGGAPQRGSAAATASMRRR--RSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK
        GG +       A  ++RRR  R +  S T+     +M  FYTDD PG ++SP VV+ MS+ FIAFV+ILHV+GK
Subjt:  GGGAPQRGSAAATASMRRR--RSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK

P38389 Protein transport protein Sec61 subunit beta1.0e-2580Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta3.0e-0641.46Show/hide
Query:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK
        +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P  VLVMS+ FIA V +LH+ GK
Subjt:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK

P60468 Protein transport protein Sec61 subunit beta3.0e-0641.46Show/hide
Query:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK
        +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P  VLVMS+ FIA V +LH+ GK
Subjt:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK

Q9CQS8 Protein transport protein Sec61 subunit beta3.0e-0641.46Show/hide
Query:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK
        +G+ G +P +  A  AA +++R+R++ S    S G      +G M +FYT+D+PGL++ P  VLVMS+ FIA V +LH+ GK
Subjt:  MGTGGGAPQRGSA--AATASMRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein7.1e-2780Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein7.1e-2780Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein7.1e-2780Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        G GAPQRGSAAATASMRRR+ TS +     SGGA+GSMLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSS---ATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein1.4e-2779.22Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        GGGAPQRGSAAATASMRRR+    S+++GG +G+MLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR

AT3G60540.2 Preprotein translocase Sec, Sec61-beta subunit protein1.4e-2779.22Show/hide
Query:  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR
        GGGAPQRGSAAATASMRRR+    S+++GG +G+MLQFYTDDAPGL+ISPNVVL+MSIGFIAFV++LHVMGKLYFV+
Subjt:  GGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTGTTACAGAATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGG
GGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTC
TCCATGTTATGGGGAAGTTGTACTTCGTACGAAGAGAAGCT
mRNA sequenceShow/hide mRNA sequence
GGCTGTTACAGAATGGGTACAGGAGGAGGAGCTCCGCAGAGAGGAAGTGCAGCCGCTACTGCAAGCATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGG
GGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTC
TCCATGTTATGGGGAAGTTGTACTTCGTACGAAGAGAAGCT
Protein sequenceShow/hide protein sequence
GCYRMGTGGGAPQRGSAAATASMRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLYFVRREA