; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0028 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0028
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationMC05:246549..246809
RNA-Seq ExpressionMC05g0028
SyntenyMC05g0028
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1225231.1 Protein transport protein Sec61 subunit beta [Morella rubra]1.11e-4396.34Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSG SGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]5.50e-4496.34Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]2.33e-45100Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]9.50e-4598.78Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]4.87e-4696.55Show/hide
Query:  LYHHRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        L+  RMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  LYHHRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

TrEMBL top hitse value%identityAlignment
A0A6J1CXG1 Protein transport protein Sec61 subunit beta1.13e-45100Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta1.13e-45100Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1GEY3 Protein transport protein Sec61 subunit beta4.60e-4598.78Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1IH25 Protein transport protein Sec61 subunit beta4.60e-4598.78Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1J088 Protein transport protein Sec61 subunit beta1.13e-45100Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta6.5e-0948.68Show/hide
Query:  MALGGAAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        +A GG +       A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ MS+ FIAFV ILHV+GK
Subjt:  MALGGAAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

P38389 Protein transport protein Sec61 subunit beta5.3e-2781.48Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta3.0e-0643.59Show/hide
Query:  GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

P60468 Protein transport protein Sec61 subunit beta3.0e-0643.59Show/hide
Query:  GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

Q9HFC7 Protein transport protein Sec61 subunit beta1.0e-0649.18Show/hide
Query:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKL
        A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K+
Subjt:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKL

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein3.8e-2881.48Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein3.8e-2881.48Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein3.8e-2881.48Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein3.8e-2881.48Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein1.1e-2782.05Show/hide
Query:  LGGAAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +GG APQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGAAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGG
GGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTC
TCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCT
mRNA sequenceShow/hide mRNA sequence
CTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGG
GGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTC
TCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCT
Protein sequenceShow/hide protein sequence
LYHHRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA