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MC05g0067 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0067
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionHelicase protein with RING/U-box domain
Genome locationMC05:488488..488745
RNA-Seq ExpressionMC05g0067
SyntenyMC05g0067
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049279.1 hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa]2.91e-2157.3Show/hide
Query:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL------EQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        TRLQ +AP+SI+I R   WNV IPLLSPLVSP        E+V + M +N AREE    +K  TFT+W+HPAAPFYY PV R   FVPV
Subjt:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL------EQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

KAB1219144.1 hypothetical protein CJ030_MR3G008389 [Morella rubra]3.84e-2157.14Show/hide
Query:  EATRLQRRAPSSIQISRPAS-WNVAIPLLSPLVSPCLEQ--VDVLMGENKAREEARSRD---KPATFTRWKHPAAPFYYGPVQRTTPFVPV
        + +RLQRRAP+S+QIS PAS WNVAIPLLSPL S       V   MGE KAREE+R +    +   F +W+HPAAPF Y P  R  PFVPV
Subjt:  EATRLQRRAPSSIQISRPAS-WNVAIPLLSPLVSPCLEQ--VDVLMGENKAREEARSRD---KPATFTRWKHPAAPFYYGPVQRTTPFVPV

KAE8650334.1 hypothetical protein Csa_009641 [Cucumis sativus]2.76e-2159.09Show/hide
Query:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPC-----LEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        TRLQ +AP+SI+I R  +WNVAIPLLSPLVSP        +  + M EN AREE     K  TFT+W+HPAAPFYY PV R  PFVPV
Subjt:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPC-----LEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

PON32321.1 hypothetical protein PanWU01x14_362290 [Parasponia andersonii]1.04e-2053.33Show/hide
Query:  EATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDV-LMGENKAREEAR----SRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        + +RLQRRAP+S+QIS  + WNVAIPLLSPL SP      +    ENK+RE+ R      DKP  F +W+HPAAPF Y P     PFVPV
Subjt:  EATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDV-LMGENKAREEAR----SRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

XP_022143991.1 uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]2.31e-55100Show/hide
Query:  QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
Subjt:  QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0L8D3 Uncharacterized protein5.34e-2459.09Show/hide
Query:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPC-----LEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        TRLQ +AP+SI+I R  +WNVAIPLLSPLVSP        +  + M EN AREE     K  TFT+W+HPAAPFYY PV R  PFVPV
Subjt:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPC-----LEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

A0A2P5A713 Uncharacterized protein5.02e-2153.33Show/hide
Query:  EATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDV-LMGENKAREEAR----SRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        + +RLQRRAP+S+QIS  + WNVAIPLLSPL SP      +    ENK+RE+ R      DKP  F +W+HPAAPF Y P     PFVPV
Subjt:  EATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDV-LMGENKAREEAR----SRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

A0A5D3D1A6 Uncharacterized protein1.41e-2157.3Show/hide
Query:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL------EQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        TRLQ +AP+SI+I R   WNV IPLLSPLVSP        E+V + M +N AREE    +K  TFT+W+HPAAPFYY PV R   FVPV
Subjt:  TRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL------EQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

A0A6A1W1M7 Uncharacterized protein1.86e-2157.14Show/hide
Query:  EATRLQRRAPSSIQISRPAS-WNVAIPLLSPLVSPCLEQ--VDVLMGENKAREEARSRD---KPATFTRWKHPAAPFYYGPVQRTTPFVPV
        + +RLQRRAP+S+QIS PAS WNVAIPLLSPL S       V   MGE KAREE+R +    +   F +W+HPAAPF Y P  R  PFVPV
Subjt:  EATRLQRRAPSSIQISRPAS-WNVAIPLLSPLVSPCLEQ--VDVLMGENKAREEARSRD---KPATFTRWKHPAAPFYYGPVQRTTPFVPV

A0A6J1CRZ0 uncharacterized protein At4g14450, chloroplastic-like1.12e-55100Show/hide
Query:  QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
Subjt:  QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic7.2e-0839.56Show/hide
Query:  QEATRLQRRAPS-SIQISRPASWNVAIPLLSPL---VSPCLEQVDVLMGENKAREEARSR-DKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        ++ ++LQRRAPS  I+ +  ++WNVAIPLLSPL   ++   +Q  V   +NK          K   F +W+HPA+PF Y P     PF+ V
Subjt:  QEATRLQRRAPS-SIQISRPASWNVAIPLLSPL---VSPCLEQVDVLMGENKAREEARSR-DKPATFTRWKHPAAPFYYGPVQRTTPFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein3.2e-1145.45Show/hide
Query:  QEATRLQRRAPSSIQISR-PASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGP
        ++++RLQRRAP  ++I+   A+W VAIPLLSP  SP  +   V+  E   +   +  +KP  F +W+HPAAPFYY P
Subjt:  QEATRLQRRAPSSIQISR-PASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGP

AT3G23170.1 unknown protein6.6e-0944.44Show/hide
Query:  QEATRLQRRAPS-SIQISRPA--SWNVAIPLLSPL-VSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        ++ +RL +R P+  I  + PA  +WN AIPLLSPL +SP    VD    E K +  A + +K   F +W+HPAAPFYY       PFVPV
Subjt:  QEATRLQRRAPS-SIQISRPA--SWNVAIPLLSPL-VSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV

AT4G14450.1 unknown protein5.1e-0939.56Show/hide
Query:  QEATRLQRRAPS-SIQISRPASWNVAIPLLSPL---VSPCLEQVDVLMGENKAREEARSR-DKPATFTRWKHPAAPFYYGPVQRTTPFVPV
        ++ ++LQRRAPS  I+ +  ++WNVAIPLLSPL   ++   +Q  V   +NK          K   F +W+HPA+PF Y P     PF+ V
Subjt:  QEATRLQRRAPS-SIQISRPASWNVAIPLLSPL---VSPCLEQVDVLMGENKAREEARSR-DKPATFTRWKHPAAPFYYGPVQRTTPFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGAGGCGACCCGGCTGCAGAGGCGGGCTCCGTCGTCGATTCAGATAAGCCGGCCGGCGAGCTGGAACGTGGCGATCCCGTTGCTATCCCCGCTGGTGTCTCCTTGCTT
GGAGCAAGTCGATGTTTTGATGGGTGAGAACAAGGCGAGGGAGGAGGCGAGGTCGCGGGACAAACCGGCCACCTTTACAAGGTGGAAGCACCCGGCGGCTCCATTCTATT
ATGGGCCTGTCCAGAGGACCACCCCCTTTGTGCCCGTC
mRNA sequenceShow/hide mRNA sequence
CAGGAGGCGACCCGGCTGCAGAGGCGGGCTCCGTCGTCGATTCAGATAAGCCGGCCGGCGAGCTGGAACGTGGCGATCCCGTTGCTATCCCCGCTGGTGTCTCCTTGCTT
GGAGCAAGTCGATGTTTTGATGGGTGAGAACAAGGCGAGGGAGGAGGCGAGGTCGCGGGACAAACCGGCCACCTTTACAAGGTGGAAGCACCCGGCGGCTCCATTCTATT
ATGGGCCTGTCCAGAGGACCACCCCCTTTGTGCCCGTC
Protein sequenceShow/hide protein sequence
QEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCLEQVDVLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV