; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0123 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0123
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description28 kDa ribonucleoprotein, chloroplastic
Genome locationMC05:857150..860447
RNA-Seq ExpressionMC05g0123
SyntenyMC05g0123
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134038.1 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]1.69e-14980.84Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAA  G+SF A+  S +G RSKHWLSDSLLA PSTQ+LP+LSR LA+ES  LRA SEKWRPV+ ISAAVVQGE AVT   EEGV EE      V GG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ++G+ ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
        ETEYKLFVGNLSWSVTSE LTQAFQEYGNVVGARVIY+GETG+SRGYGFVSYSTK EME ALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

XP_016898952.1 PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein [Cucumis melo]1.70e-13781.59Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAA  G+SF   T   +G RSKHW SDSLLA PSTQ+LP+LSR L +ES  LRA SE+WRPVL ISAAVVQGE AV    EEGV EE     AV GG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ+HGV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV
        ETEYKLFVGNLSWSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTK EME ALEALNEVELEGRVIRV
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV

XP_022157973.1 28 kDa ribonucleoprotein, chloroplastic [Momordica charantia]1.55e-19097.91Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDG      AYMGRVLRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
        ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

XP_022937376.1 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata]1.16e-13578.28Show/hide
Query:  SKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAVGGGSPVEAGSTKLYFGNLPYSVD
        +K WLSD+LL  PS  M P+LSR LA+ESA LRAFSE+WRP LGISAAVVQ + AVT   EEGVA+E   +G G+AV GGSPVE+G TKLYFGNLPYSVD
Subjt:  SKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAVGGGSPVEAGSTKLYFGNLPYSVD

Query:  SSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESL
        SSQLA IVQ++GV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPK  LYP++EY+L+V NLSWSVTSESL
Subjt:  SSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESL

Query:  TQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
         QAFQEYGNVVGARVIY+ ETG+SRGYGFVSYSTK EME ALEA NE+ELEGRVIRVSLA+GKQAQG
Subjt:  TQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

XP_023539751.1 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.29e-13574.14Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAV
        MA AAA  G+S            +K WLSD+LL  PS  M P+LSR LA+ESA LRAFSE+WRP LGISAAVVQ + AVT   EEGVA+E   +G G+ V
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAV

Query:  GGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP
         GGSPVE+G TKLYFGNLPYSVDSSQLA IVQ++GV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPK  
Subjt:  GGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP

Query:  LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
        LYP++EY+L+V NLSWSVTSESL QAFQEYGNVVGARVIY+ ETG+SRGYGFVSYSTK EME ALEA NE+ELEGRVIRVSLA+GKQAQG
Subjt:  LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

TrEMBL top hitse value%identityAlignment
A0A0A0L496 Uncharacterized protein8.17e-15080.84Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAA  G+SF A+  S +G RSKHWLSDSLLA PSTQ+LP+LSR LA+ES  LRA SEKWRPV+ ISAAVVQGE AVT   EEGV EE      V GG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ++G+ ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
        ETEYKLFVGNLSWSVTSE LTQAFQEYGNVVGARVIY+GETG+SRGYGFVSYSTK EME ALE +NE+ELEGRVIRVSLAEGKQA G
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

A0A1S4DSH7 LOW QUALITY PROTEIN: putative G3BP-like protein8.24e-13881.59Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAA  G+SF   T   +G RSKHW SDSLLA PSTQ+LP+LSR L +ES  LRA SE+WRPVL ISAAVVQGE AV    EEGV EE     AV GG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ+HGV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV
        ETEYKLFVGNLSWSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTK EME ALEALNEVELEGRVIRV
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV

A0A5D3CZH4 Putative G3BP-like protein6.08e-13381.34Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAA  G+SF   T   +G RSKHW SDSLLA PSTQ+LP+LSR L +ES  LRA SE+WRPVL ISAAVVQGE AVT   EEGV EE     AV GG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVE+GSTKLYFGNLPYSVDSSQLA IVQ+HGV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEV
        ETEYKLFVGNLSWSVTSE LTQAFQEYGNVVGARVIYNGETG+SRGYGFVSYSTK EME ALEALNEV
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEV

A0A6J1DUT6 28 kDa ribonucleoprotein, chloroplastic7.49e-19197.91Show/hide
Query:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
        MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG
Subjt:  MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGG

Query:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP
        SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDG      AYMGRVLRVNFSDKPKPKEPLYP
Subjt:  SPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYP

Query:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
        ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
Subjt:  ETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

A0A6J1FA65 28 kDa ribonucleoprotein, chloroplastic-like5.60e-13678.28Show/hide
Query:  SKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAVGGGSPVEAGSTKLYFGNLPYSVD
        +K WLSD+LL  PS  M P+LSR LA+ESA LRAFSE+WRP LGISAAVVQ + AVT   EEGVA+E   +G G+AV GGSPVE+G TKLYFGNLPYSVD
Subjt:  SKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEE---KGGGEAVGGGSPVEAGSTKLYFGNLPYSVD

Query:  SSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESL
        SSQLA IVQ++GV ELIEVLYDRNTGKSRGFAFVTMSSIEDCN+VIENLDG      AYMGR+LRVNFSDKPKPK  LYP++EY+L+V NLSWSVTSESL
Subjt:  SSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESL

Query:  TQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG
         QAFQEYGNVVGARVIY+ ETG+SRGYGFVSYSTK EME ALEA NE+ELEGRVIRVSLA+GKQAQG
Subjt:  TQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG

SwissProt top hitse value%identityAlignment
P19682 28 kDa ribonucleoprotein, chloroplastic1.3e-3443.75Show/hide
Query:  KLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPET---EYK
        KL+ GNLPY +DS  LA + Q+ GV E+ EV+Y+R T +SRGF FVTMS++E+ ++ +E L   + +N    GR+L VN +     +    P T    Y+
Subjt:  KLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPET---EYK

Query:  LFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAE
        ++VGN+ W +    L Q F E+G VV ARV+++ E+GRSRG+GFV+ S++ EM +A+  L+   L+GR IRV+ AE
Subjt:  LFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAE

P19683 31 kDa ribonucleoprotein, chloroplastic1.0e-3440.36Show/hide
Query:  EPAVTADAEEGVAEEKGGGEAVGGGSPVEAG-----------STKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNR
        EP+     EEG  E  G     G    VEA              KL+ GNLPY VDS  LA + ++ GV E+ EV+Y+R+T +SRGF FVTMS++E+  +
Subjt:  EPAVTADAEEGVAEEKGGGEAVGGGSPVEAG-----------STKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNR

Query:  VIENLDGMFLVNQAYMGRVLRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEK
         +E +   + VN    GR+L VN +    ++P+ + P   E  Y+++VGN+ W +    L Q F E+G VV ARV+Y+ ETGRSRG+GFV+ +++ EM  
Subjt:  VIENLDGMFLVNQAYMGRVLRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEK

Query:  ALEALNEVELEGRVIRVSLAEGK
        A+  L+   L+GR IRV++AE +
Subjt:  ALEALNEVELEGRVIRVSLAEGK

P19684 33 kDa ribonucleoprotein, chloroplastic1.2e-3540.09Show/hide
Query:  EPAVTADAEEGV--AEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMF
        E A++A+ EE +   EE+   E+V GG        +LY GNLP+S+ SSQL+ I  E G    +E++YDR T +SRGFAFVTM S+E+    I   DG  
Subjt:  EPAVTADAEEGV--AEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMF

Query:  LVNQAYMGRVLRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKA
               GR ++VNF + P+  E              + ++ +KL+V NLSW++TS+ L  AF +    + A+VIY+  +GRSRG+GF+++S+   M  A
Subjt:  LVNQAYMGRVLRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKA

Query:  LEALNEVELEGRVIRVSLAEGK
        L+ +NEVELEGR +R+++A  K
Subjt:  LEALNEVELEGRVIRVSLAEGK

P28644 28 kDa ribonucleoprotein, chloroplastic5.5e-3642.15Show/hide
Query:  GISAAVVQGEP----AVTADAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDC
        G + AV++GE     AV+  +E  V++E G     G   P E    KL+ GNLPY VDS +LAGI    GV E+ EV+Y+R T +SRGF FVTMS++E+ 
Subjt:  GISAAVVQGEP----AVTADAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDC

Query:  NRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEM
         + +E L+G  +      GR L VN    P+      P  ++    +++VGNL W V +  L Q F E+G VV ARV+ + ETGRSRG+GFV+ S++ E+
Subjt:  NRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEY----KLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEM

Query:  EKALEALNEVELEGRVIRVSLAE
          A+ AL+   L+GR +RV++AE
Subjt:  EKALEALNEVELEGRVIRVSLAE

Q08935 29 kDa ribonucleoprotein A, chloroplastic2.3e-3440.09Show/hide
Query:  DAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMG
        D ++GV EE+         SP      K++ GNLP+S DS+ LA + +  G  E++EV+YD+ TG+SRGF FVTMSS E+     +  +G  L      G
Subjt:  DAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMG

Query:  RVLRVNFSDKPKPKEPL----------YPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELE
        R LRVN    P+ +E              ++  +++VGNL+W V  ++L   F E G VV A+V+Y+ ++GRSRG+GFV+YS+  E+  A+E+L+ V+L 
Subjt:  RVLRVNFSDKPKPKEPL----------YPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELE

Query:  GRVIRVSLAEGK
        GR IRVS AE +
Subjt:  GRVIRVSLAEGK

Arabidopsis top hitse value%identityAlignment
AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-6865.22Show/hide
Query:  VTADAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQA
        +T   EE   EEK  G A     P  A +TKLYFGNLPY+VDS+ LA I+Q+   PEL+EVLY+R+TG+SRGFAFVTMS++EDCN +I+NLDG       
Subjt:  VTADAEEGVAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQA

Query:  YMGRVLRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV
        Y+GR L+VNF+DKPKP KEPLYPETE+KLFVGNLSW+VTSESL  AF+E G+VVGARV+++G+TGRSRGYGFV YS+K EME ALE+L+  ELEGR IRV
Subjt:  YMGRVLRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRV

Query:  SLAEGKQ
        +LA+GK+
Subjt:  SLAEGKQ

AT3G52150.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-3439.15Show/hide
Query:  PVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP----
        P    + ++Y GN+P +V + QL  +V+EHG  E ++V+YD+ +G+SR F F TM S+ED N V+E L+G         GR ++VN ++KP    P    
Subjt:  PVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP----

Query:  ------LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLA
               + ++ YK++VGNL+ +VT E L   F E G VV A+V     T +S G+GFV++S++ ++E A+ ALN   LEG+ IRV+ A
Subjt:  ------LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLA

AT3G52150.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-3439.15Show/hide
Query:  PVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP----
        P    + ++Y GN+P +V + QL  +V+EHG  E ++V+YD+ +G+SR F F TM S+ED N V+E L+G         GR ++VN ++KP    P    
Subjt:  PVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEP----

Query:  ------LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLA
               + ++ YK++VGNL+ +VT E L   F E G VV A+V     T +S G+GFV++S++ ++E A+ ALN   LEG+ IRV+ A
Subjt:  ------LYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLA

AT3G52380.1 chloroplast RNA-binding protein 334.0e-3438.43Show/hide
Query:  AVVQGEPAVTADAEEG---VAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIE
        A V+ E  V  + +EG   V EEK   +A G     E G  +LY GNLPY++ SS+L+ I  E G    ++++YD+ T +SRGF FVTM SIE+    ++
Subjt:  AVVQGEPAVTADAEEG---VAEEKGGGEAVGGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIE

Query:  NLDGMFLVNQAYMGRVLRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTK
            MF  +Q   GR ++VNF + P+  E              Y ++ +K++ GNL W++TS+ L  AF +   V+GA+VIY   TGRSRG+GF+S+ + 
Subjt:  NLDGMFLVNQAYMGRVLRVNFSDKPKPKE------------PLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTK

Query:  PEMEKALEALNEVELEGRVIRVSLAEGKQ
          ++ AL  +N VE+EGR +R++LA  ++
Subjt:  PEMEKALEALNEVELEGRVIRVSLAEGKQ

AT5G50250.1 chloroplast RNA-binding protein 31B1.8e-3441.12Show/hide
Query:  ADAEEGVAEEKGGGEAV---------GGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDG
        A+ EEG     GG             G G P      KL+ GNLPY VDS  LA + ++ G  E+ EV+Y+R+T +SRGF FVTMS++E+  + +E  + 
Subjt:  ADAEEGVAEEKGGGEAV---------GGGSPVEAGSTKLYFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDG

Query:  MFLVNQAYMGRVLRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNE
         F VN    GR L VN +     +P+ ++P   +  ++++VGNL W V S  L + F E+G VV ARV+ + ETGRSRG+GFV  S + E+  A+ AL+ 
Subjt:  MFLVNQAYMGRVLRVNFS----DKPKPKEPLYPETEYKLFVGNLSWSVTSESLTQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNE

Query:  VELEGRVIRVSLAE
          LEGR I+V++AE
Subjt:  VELEGRVIRVSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGCCACCGTCGGCTCGTCCTTCACCGCTTCCACGCACTCCTTTAAGGGTTTACGGTCCAAGCACTGGCTCTCCGATTCTCTCCTCGCAATGCCATC
AACCCAAATGTTGCCTGTCTTGTCACGCTATCTGGCCCTTGAATCGGCTTCGCTCCGAGCTTTCTCCGAGAAGTGGCGGCCGGTTCTGGGCATCTCCGCCGCCGTGGTTC
AAGGAGAACCGGCGGTGACGGCTGATGCTGAAGAAGGTGTGGCGGAGGAGAAGGGAGGAGGGGAAGCGGTGGGTGGTGGTTCTCCGGTGGAGGCCGGGAGTACTAAGCTC
TACTTTGGGAACTTGCCTTACAGCGTTGATAGTTCCCAGCTCGCCGGCATCGTTCAGGAACATGGGGTCCCTGAGCTTATTGAGGTTCTTTATGACAGGAATACTGGAAA
GAGCAGAGGATTTGCATTTGTAACCATGAGCAGTATTGAAGATTGTAATAGAGTCATCGAAAATCTGGATGGAATGTTTCTTGTCAATCAGGCTTACATGGGCAGAGTTT
TGAGGGTTAATTTCTCAGACAAGCCTAAGCCTAAGGAACCTTTATATCCAGAAACAGAGTATAAGCTTTTCGTCGGCAACTTATCCTGGTCGGTAACATCTGAAAGTTTG
ACACAAGCTTTTCAAGAATATGGAAATGTGGTAGGAGCAAGGGTCATCTATAATGGGGAGACTGGAAGGTCACGTGGTTATGGCTTTGTATCTTATTCAACAAAACCAGA
GATGGAAAAAGCACTTGAAGCTCTTAATGAAGTGGAACTTGAAGGCAGGGTAATACGTGTGAGCTTGGCTGAAGGAAAGCAGGCACAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
AGTTGACTAAAATGATATAATTAATTTCGGCATAGCTTATAAGTTAAAAAAAATTAAAAGGGTGTAGGTTCAAATTACATATATTACAATATTAAAAGAAATTGATGTGT
TAATCCAAATGGGGATTTAACATTATCTATCTCTCACAATTGGACACCAAGCGGCCACGTCTGCATGAACTGCTGACAAACATTCTCCACATGATCAGTTTGAGGCTGCG
AAAAGGCAACACCGCTCTCTATTCTACCGCTGCTACCCCCTGCTACTCCCCAATCGGATTCCACCACCATGGCCGCCGCCGCCGCCACCGTCGGCTCGTCCTTCACCGCT
TCCACGCACTCCTTTAAGGGTTTACGGTCCAAGCACTGGCTCTCCGATTCTCTCCTCGCAATGCCATCAACCCAAATGTTGCCTGTCTTGTCACGCTATCTGGCCCTTGA
ATCGGCTTCGCTCCGAGCTTTCTCCGAGAAGTGGCGGCCGGTTCTGGGCATCTCCGCCGCCGTGGTTCAAGGAGAACCGGCGGTGACGGCTGATGCTGAAGAAGGTGTGG
CGGAGGAGAAGGGAGGAGGGGAAGCGGTGGGTGGTGGTTCTCCGGTGGAGGCCGGGAGTACTAAGCTCTACTTTGGGAACTTGCCTTACAGCGTTGATAGTTCCCAGCTC
GCCGGCATCGTTCAGGAACATGGGGTCCCTGAGCTTATTGAGGTTCTTTATGACAGGAATACTGGAAAGAGCAGAGGATTTGCATTTGTAACCATGAGCAGTATTGAAGA
TTGTAATAGAGTCATCGAAAATCTGGATGGAATGTTTCTTGTCAATCAGGCTTACATGGGCAGAGTTTTGAGGGTTAATTTCTCAGACAAGCCTAAGCCTAAGGAACCTT
TATATCCAGAAACAGAGTATAAGCTTTTCGTCGGCAACTTATCCTGGTCGGTAACATCTGAAAGTTTGACACAAGCTTTTCAAGAATATGGAAATGTGGTAGGAGCAAGG
GTCATCTATAATGGGGAGACTGGAAGGTCACGTGGTTATGGCTTTGTATCTTATTCAACAAAACCAGAGATGGAAAAAGCACTTGAAGCTCTTAATGAAGTGGAACTTGA
AGGCAGGGTAATACGTGTGAGCTTGGCTGAAGGAAAGCAGGCACAGGGGTAAATGTAAAACTGATTTACAATGAGCAAACAAGAAACGGGAAGGAGTTTCTACCTAGGTA
GCTGTAAACAAACAGACCCTGTAGCAGGGAGTCGGGACTGAAGGATGAATCGGATGAACTCCACACTACTTGAAGGTCTGTCACTAGTTATCTCATCGGAGATCAGCTCC
TCAAAAACACTGTTCAAATACACTGCACTATTTGCCCAAGTAGGAAAATTCACTCTAGTCTTGGGAAGAGTTTACTGTTTGTTCACCCAGCAATCTCGTTCTATTTTTGA
AAGTATCAACACGTCAAAAAGAATACACGCAAAGCTGAAAAATAAAACCAGCCCACCACTCCAGATTCAAAAACTCATCCTCAAGGACTTTCTGCAAACACCTGGTGTGC
ACCCCACTAGACAAATCTAATCTTCTAAGGATTTCTTACCTCCAAAAGGGAGAAAAGAAAAGGTTTGGTTTGCAGGGCAGGAGCAGCGACTGGTGAGCGTGAGAAATACA
AACTTATGCAGTAGATTAGATTGTGCCGATCTCTGTCTCCAAAAACTCTAAAAGCCCCGTAGAGGCACAAAAGCATTGTTCCAATTGTGTCAGCAGACAAGGAGAG
Protein sequenceShow/hide protein sequence
MAAAAATVGSSFTASTHSFKGLRSKHWLSDSLLAMPSTQMLPVLSRYLALESASLRAFSEKWRPVLGISAAVVQGEPAVTADAEEGVAEEKGGGEAVGGGSPVEAGSTKL
YFGNLPYSVDSSQLAGIVQEHGVPELIEVLYDRNTGKSRGFAFVTMSSIEDCNRVIENLDGMFLVNQAYMGRVLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESL
TQAFQEYGNVVGARVIYNGETGRSRGYGFVSYSTKPEMEKALEALNEVELEGRVIRVSLAEGKQAQG