; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionreplication factor C subunit 3-like
Genome locationMC05:1880102..1884542
RNA-Seq ExpressionMC05g0259
SyntenyMC05g0259
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597225.1 Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia]8.94e-26971.38Show/hide
Query:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG
        SLRRS+SD    R +RRR + ST  +SSKSSWS+KLAK+LARL LFS +S+LTEESL+AHN+RI ++L      DKTP KSSPYYRGLTDSSLAINYHHG
Subjt:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG

Query:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS
        PL T         GPH+ +SS T     TS S  VVSKLK WAPCL GK N KP           + +  +   T  A SSS    PE + R        
Subjt:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS

Query:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG
            + +EKLLRER +   R  GG      GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK++V EKGCG+YIFEGPPGVGKRTMI+AMLR+AFG
Subjt:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG

Query:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF
         QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNLSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSKIF
Subjt:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF

Query:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV
        FCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKNNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIV
Subjt:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV

Query:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE
        EEQSPKQLYIVRGKLKKLIE+DVSPNFIF+TLVDELKKFLDEELQRR+E  YADYNK+EEK FV+++ GNGEEAV K LHDPMRKNV+HF+KIE
Subjt:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE

XP_008438224.1 PREDICTED: replication factor C subunit 3-like [Cucumis melo]4.40e-26268.1Show/hide
Query:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP
        PSLRRS+SD    R R RRR T STTSSKSSWSSKL K+LARLAL S DS+LTEESLEAHNKRI +        +KTPKSSPYYRGLTDSSLAINYHHGP
Subjt:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP

Query:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEAL
        L          S P+  + + +   S  S +VSK K  WAPCL K   +  P        P + +     +    TV   A+  SS          EE  
Subjt:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEAL

Query:  NISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRT
         +S+D+   ++KLLRER + S       RGGG G         E  EKERY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+Y IFEG PGVGKRT
Subjt:  NISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRT

Query:  MIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWA
        MI+AMLREAFG+Q++EIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LSNETLMYVKWA
Subjt:  MIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWA

Query:  IERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWE
        IERNKGC+KIFFCC+D SKL  L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIRSLEASW KSQLF+EDEN+LLTGWE
Subjt:  IERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWE

Query:  DDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHH
        DDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS++ G+GEE V K  +DP+RKNV+H
Subjt:  DDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHH

Query:  FMKIE
        F+KIE
Subjt:  FMKIE

XP_011650816.1 replication factor C subunit 3 [Cucumis sativus]9.20e-26167.76Show/hide
Query:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP
        PSLRRS+SD    R R RRR T STTSSKSSWSSKL K+LARLA  S DS+LTEESLEAHNKRI +        DKTPKSSPYYRGLTDSSLAINYHHGP
Subjt:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP

Query:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKGW-APCLGKSNDK-PAPGPDKNNNNNSIIQNIPTVT---------KTASSSSSKPKPEPVRRSE
        L          S P++ + + +   S  S +VSK K + APCL K   + P   P K    +  IQ + T T          + S+S+S    E +  S+
Subjt:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKGW-APCLGKSNDK-PAPGPDKNNNNNSIIQNIPTVT---------KTASSSSSKPKPEPVRRSE

Query:  EALNISNDDGDHQEKLLRERSLQSQRGG-----------GGGEVA----EKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVG
        E +         ++KLLRER +    GG           GGG V     EKERY+WGD  RPKVLE+FICN++ A +LKE+V+EKGCG+Y IFEG PGVG
Subjt:  EALNISNDDGDHQEKLLRERSLQSQRGG-----------GGGEVA----EKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVG

Query:  KRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYV
        KRTMI+AMLR+AFG+Q+MEIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LS ETLMY+
Subjt:  KRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYV

Query:  KWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT
        KWA+ER KGCSKIFFCCSD SKLL L+SLCTL+ LSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNS+NNLRQAIRSLEASW KSQLF+EDEN+LLT
Subjt:  KWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT

Query:  GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKN
        GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADYNK+EEK FVS++ G+GEEAV K  HD +RKN
Subjt:  GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKN

Query:  VHHFMKIE
        V+HF+KIE
Subjt:  VHHFMKIE

XP_022946202.1 replication factor C subunit 3-like [Cucurbita moschata]1.80e-26871.38Show/hide
Query:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG
        SLRRS+SD    R +RRR + ST  +SSKSSWS+KLAK+LARL LFS +S+LTEESL+AHN+RI ++L      DKTP KSSPYYRGLTDSSLAINYHHG
Subjt:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG

Query:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS
        PL T         GPH+ +SS T     TS S  VVSKLK WAPCL GK N KP           + +  +   T  A SSS    PE + R        
Subjt:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS

Query:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG
            + +EKLLRER +   R  GG      GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YIFEGPPGVGKRTMI+AMLR+AFG
Subjt:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG

Query:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF
         QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNLSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSKIF
Subjt:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF

Query:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV
        FCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKNNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIV
Subjt:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV

Query:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE
        EEQSPKQLYIVRGKLKKLIE+DVSPNFIF+TLVDELKKFLDEELQ R+E  YADYNK+EEK FV+++ GNGEEAV K LHDPMRKNV+HF+KIE
Subjt:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE

XP_022975501.1 replication factor C subunit 3-like [Cucurbita maxima]2.03e-26771.19Show/hide
Query:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG
        SLRRS+SD    R +RR  + ST  +SSKSSWS+KLAK+LARL LFS +S+LTEESL+AHN+RI ++L      DKTP KSSPYYRGLTDSSLAINYHHG
Subjt:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG

Query:  PLATPGPAHQQLSGPHYASSSATQVT--SFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISN
        PL T    H      HYASS+ T  T  S S  VVSKLK WAPCL GK N KP   P  + +       +   T + ++SSS  K E +   +E      
Subjt:  PLATPGPAHQQLSGPHYASSSATQVT--SFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISN

Query:  DDGDHQEKLLRERSL----QSQRGG----GGGEVAEKE----RYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLRE
              EKLLRER +    +  R G    GGGE +EKE    RYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YIFEGPPGVGKRTMI+AMLR+
Subjt:  DDGDHQEKLLRERSL----QSQRGG----GGGEVAEKE----RYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLRE

Query:  AFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS
        AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNLSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCS
Subjt:  AFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS

Query:  KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAK
        KIFFCCSDVSKLL L+SLCT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKNNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAK
Subjt:  KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAK

Query:  KIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE
        KIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIF+TLVDELKKFLDEELQRR+E  YADYNK+EEK FV+D+ GNGEEAV K LHDPMRKNV+HF+KIE
Subjt:  KIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE

TrEMBL top hitse value%identityAlignment
A0A1S3AWH3 replication factor C subunit 3-like2.13e-26268.1Show/hide
Query:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP
        PSLRRS+SD    R R RRR T STTSSKSSWSSKL K+LARLAL S DS+LTEESLEAHNKRI +        +KTPKSSPYYRGLTDSSLAINYHHGP
Subjt:  PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGP

Query:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEAL
        L          S P+  + + +   S  S +VSK K  WAPCL K   +  P        P + +     +    TV   A+  SS          EE  
Subjt:  LATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEAL

Query:  NISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRT
         +S+D+   ++KLLRER + S       RGGG G         E  EKERY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+Y IFEG PGVGKRT
Subjt:  NISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRT

Query:  MIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWA
        MI+AMLREAFG+Q++EIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LSNETLMYVKWA
Subjt:  MIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWA

Query:  IERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWE
        IERNKGC+KIFFCC+D SKL  L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIRSLEASW KSQLF+EDEN+LLTGWE
Subjt:  IERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWE

Query:  DDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHH
        DDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS++ G+GEE V K  +DP+RKNV+H
Subjt:  DDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHH

Query:  FMKIE
        F+KIE
Subjt:  FMKIE

A0A5A7TZV7 Replication factor C subunit 3-like3.53e-26068.24Show/hide
Query:  RHRRRRRTFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGP
        R  RRR T STTSSKSSWSSKL K+LARLAL S DS+LTEESLEAHNKRI +        +KTPKSSPYYRGLTDSSLAINYHHGPL          S P
Subjt:  RHRRRRRTFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGP

Query:  HYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISNDDGDHQEKLL
        +  + + +   S  S +VSK K  WAPCL K   +  P        P + +     +    TV   A+  SS          EE   +S+D+   ++KLL
Subjt:  HYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISNDDGDHQEKLL

Query:  RERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRTMIRAMLREAFGHQA
        RER + S       RGGG G         E  EKERY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+Y IFEG PGVGKRTMI+AMLREAFG+Q+
Subjt:  RERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY-IFEGPPGVGKRTMIRAMLREAFGHQA

Query:  MEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCC
        +EIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LSNETLMYVKWAIERNKGC+KIFFCC
Subjt:  MEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCC

Query:  SDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQ
        +D SKL  L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIRSLEASW KSQLF+EDEN+LLTGWEDDIADVAKKIVEEQ
Subjt:  SDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQ

Query:  SPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIEG
        SPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS++ G+GEE V K  +DP+RKNV+HF+KIEG
Subjt:  SPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIEG

A0A5D3D1K1 Replication factor C subunit 3-like3.45e-22265.47Show/hide
Query:  TPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPT
        +P  +PYYRGLTDSSLAINYHHGPL          S P+  + + +   S  S +VSK K  WAPCL K   +  P        P + +     +    T
Subjt:  TPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAPG-------PDKNNNNNSIIQNIPT

Query:  VTKTASSSSSKPKPEPVRRSEEALNISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLK
        V   A+  SS          EE   +S+D+   ++KLLRER + S       RGGG G         E  EKERY+WGD YRPK LE+FICN++ A +LK
Subjt:  VTKTASSSSSKPKPEPVRRSEEALNISNDDGDHQEKLLRERSLQSQ------RGGGGG---------EVAEKERYTWGDKYRPKVLEEFICNRRKARQLK

Query:  EVVREKGCGNY-IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHS
        E+V+EKGCG+Y IFEG PGVGKRTMI+AMLREAFG+Q++E           SEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPLPCNH+
Subjt:  EVVREKGCGNY-IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHS

Query:  NCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIR
        NC+GI LCEA++LSNETLMYVKWAIERNKGC+KIFFCC+D SKL  L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIR
Subjt:  NCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIR

Query:  SLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVS
        SLEASW KSQLF+EDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS
Subjt:  SLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVS

Query:  DQQGNGEEAVAKVLHDPMRKNVHHFMKIEG
        ++ G+GEE V K  +DP+RKNV+HF+KIEG
Subjt:  DQQGNGEEAVAKVLHDPMRKNVHHFMKIEG

A0A6J1G337 replication factor C subunit 3-like8.72e-26971.38Show/hide
Query:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG
        SLRRS+SD    R +RRR + ST  +SSKSSWS+KLAK+LARL LFS +S+LTEESL+AHN+RI ++L      DKTP KSSPYYRGLTDSSLAINYHHG
Subjt:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG

Query:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS
        PL T         GPH+ +SS T     TS S  VVSKLK WAPCL GK N KP           + +  +   T  A SSS    PE + R        
Subjt:  PLATPGPAHQQLSGPHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNIS

Query:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG
            + +EKLLRER +   R  GG      GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YIFEGPPGVGKRTMI+AMLR+AFG
Subjt:  NDDGDHQEKLLRERSLQSQR--GG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFG

Query:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF
         QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNLSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSKIF
Subjt:  HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIF

Query:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV
        FCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKNNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIV
Subjt:  FCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIV

Query:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE
        EEQSPKQLYIVRGKLKKLIE+DVSPNFIF+TLVDELKKFLDEELQ R+E  YADYNK+EEK FV+++ GNGEEAV K LHDPMRKNV+HF+KIE
Subjt:  EEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE

A0A6J1IEE5 replication factor C subunit 3-like9.84e-26871.19Show/hide
Query:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG
        SLRRS+SD    R +RR  + ST  +SSKSSWS+KLAK+LARL LFS +S+LTEESL+AHN+RI ++L      DKTP KSSPYYRGLTDSSLAINYHHG
Subjt:  SLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHG

Query:  PLATPGPAHQQLSGPHYASSSATQVT--SFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISN
        PL T    H      HYASS+ T  T  S S  VVSKLK WAPCL GK N KP   P  + +       +   T + ++SSS  K E +   +E      
Subjt:  PLATPGPAHQQLSGPHYASSSATQVT--SFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISN

Query:  DDGDHQEKLLRERSL----QSQRGG----GGGEVAEKE----RYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLRE
              EKLLRER +    +  R G    GGGE +EKE    RYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YIFEGPPGVGKRTMI+AMLR+
Subjt:  DDGDHQEKLLRERSL----QSQRGG----GGGEVAEKE----RYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLRE

Query:  AFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS
        AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNLSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCS
Subjt:  AFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS

Query:  KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAK
        KIFFCCSDVSKLL L+SLCT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKNNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAK
Subjt:  KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAK

Query:  KIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE
        KIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIF+TLVDELKKFLDEELQRR+E  YADYNK+EEK FV+D+ GNGEEAV K LHDPMRKNV+HF+KIE
Subjt:  KIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIE

SwissProt top hitse value%identityAlignment
Q2TBV1 Replication factor C subunit 32.7e-3429.69Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLS
        W DKYRP  L +   ++ +A QL+ +V+   CG++   +  GP G GK+T I  +LRE +G    +++   +     S+   +IE+    S++++EVN S
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLS

Query:  QTKGFEKQVIVQLIK---ETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF
             ++ VI +++K   ++      +  + + +LL E +KL+ +    ++  +E+     ++  CC+  SK++ P+ S C  + +  PS ++I  VL  
Subjt:  QTKGFEKQVIVQLIK---ETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF

Query:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE
        V K+EG +L  +LA R+A+ S  NLR+A+   EA   +   F  D+    T WE  + + A  IV +Q+P++L  VRG+L +L+ H + P  I + L+ E
Subjt:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE

Query:  LKKFLDEELQRRIEGLYADY
        L    D +L+  +  + A Y
Subjt:  LKKFLDEELQRRIEGLYADY

Q54BN3 Probable replication factor C subunit 32.6e-3732.58Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTK
        W DKY+P  L++   +   +  LK +++     + +  GP G GK+T I A+L+E +G  A+++K   R F   +     I++    S +++E+N  +  
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTK

Query:  GFEKQVIVQLIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFVAK
         +++ VI  +IKE     P +  +      ++L E +KLS +    ++  +E+     ++  CC   +K++ P+ S C  I +  PS++EI +VL  VA 
Subjt:  GFEKQVIVQLIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFVAK

Query:  QEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKK
         E FDL ++LA  +A  S  NLR A+  LE+   K   F+  E  LL  WE+ I+ + K   EEQSP +L IVRGKL +L+ H + P  IF+TL+ E+ K
Subjt:  QEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKK

Query:  FLDEELQRRI
         LD  ++  I
Subjt:  FLDEELQRRI

Q852K3 Replication factor C subunit 52.8e-3932.37Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ
        W DKYRPK L++   + + A+ LK++V E+ C + +F GP G GK+T++ A++++ FG  A ++K   + +  D  S  +  IE+ +  S+H+VE+N S 
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ

Query:  TKGFEKQVIVQLIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFV
            ++ V+ ++IKE     P +    +    ++L E +KLS E    ++  +E+     ++  CC+  SK+   + S C  + ++ PS+ +IV+VLEF+
Subjt:  TKGFEKQVIVQLIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFV

Query:  AKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDEL
         K+E   L    A RIA  S  NLR+AI   E    +   F  ++      WE  ++++A  I++EQSPK+L+ VR K  +L+ + + P  I + L+ EL
Subjt:  AKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDEL

Query:  KKFLDEELQRRI
         K LD +L+  I
Subjt:  KKFLDEELQRRI

Q8R323 Replication factor C subunit 32.1e-3429.69Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLS
        W DKYRP  L     ++ +A QL+ +V+   CG++   +  GP G GK+T I  +LRE +G    +++   +     S+   +IE+    S++++EVN S
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLS

Query:  QTKGFEKQVIVQLIK---ETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF
             ++ VI +++K   ++      +  + + +LL E +KL+ +    ++  +E+     ++  CC+  SK++ P+ S C  + +  PS ++I  VL  
Subjt:  QTKGFEKQVIVQLIK---ETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF

Query:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE
        V ++EG  L + LA R+A+ S  NLR+A+   EA   +   F ED+    T WE  + + A  IV +Q+P++L  VRG+L +L+ H + P  I + L+ E
Subjt:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE

Query:  LKKFLDEELQRRIEGLYADY
        L    D +L+  +  + A Y
Subjt:  LKKFLDEELQRRIEGLYADY

Q8VXX4 Replication factor C subunit 35.5e-4335.87Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ
        W DKYRPK L++ I +   A++LK++V E+ C + +F GP G GK+T+I A+L++ +G  A ++K   R +  D  S  +  +E+    S+++VE+  S 
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ

Query:  TKGFEKQVIVQ-LIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF
          GF+ + IVQ +IKE     P +    +G   ++L E +KLS E    ++  +E+     ++  CC+  SK+   + S C  + ++ PS++EIV+VLEF
Subjt:  TKGFEKQVIVQ-LIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF

Query:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV
        VAK+E   L    A RIA+ S  +LR+AI SLE    + Q +    NQ+++   WE+ +A++A  +++EQSPK+L+ VRGK+ +L+ + + P  I + L+
Subjt:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV

Query:  DELKKFLDEELQRRI
         EL K LD EL+  +
Subjt:  DELKKFLDEELQRRI

Arabidopsis top hitse value%identityAlignment
AT1G63160.1 replication factor C 28.7e-1224.33Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTK
        W +KYRP  + + + N     +L+ + R+    N I  GPPG GK T I A+  E  G      KE V                       +E+N S  +
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTK

Query:  GFE--KQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFVAKQ
        G +  +  I    ++  +  P  H   + ++L EA+ +++     ++  IE     ++    C+  +K++ P+ S C L+  S  S Q+I+  L  V   
Subjt:  GFE--KQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEFVAKQ

Query:  EGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKF
        E         E I   +  ++RQA+ +L+A+++    F   EN      +     V K IV      +  I    LK+L +   SP  I  TL   +K +
Subjt:  EGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKF

AT1G77470.1 replication factor C subunit 33.1e-0921.51Show/hide
Query:  GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRES
        G G   + +   W +KYRP+ L++   +R     +  +  E    + +  GPPG GK + I A+ R+ +G +   +                        
Subjt:  GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRES

Query:  SHYVEVNLSQTKGFEKQVIVQLIKETHS--PLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLP-LTSLCTLIHLSPPSKQ
           +E+N S  +G +  V+ Q I++  S        S+ + +LL EA+ ++ +    ++  IE+    ++     + V+K++P L S CT    +P    
Subjt:  SHYVEVNLSQTKGFEKQVIVQLIKETHS--PLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLP-LTSLCTLIHLSPPSKQ

Query:  EIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDI
         + + L+ V + E   +S      +   S  ++R+A+  L+++   S+   E+E++ +T  E+D+
Subjt:  EIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDI

AT5G27740.1 ATPase family associated with various cellular activities (AAA)3.9e-4435.87Show/hide
Query:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ
        W DKYRPK L++ I +   A++LK++V E+ C + +F GP G GK+T+I A+L++ +G  A ++K   R +  D  S  +  +E+    S+++VE+  S 
Subjt:  WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQ

Query:  TKGFEKQVIVQ-LIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF
          GF+ + IVQ +IKE     P +    +G   ++L E +KLS E    ++  +E+     ++  CC+  SK+   + S C  + ++ PS++EIV+VLEF
Subjt:  TKGFEKQVIVQ-LIKETHSPLPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLIHLSPPSKQEIVEVLEF

Query:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV
        VAK+E   L    A RIA+ S  +LR+AI SLE    + Q +    NQ+++   WE+ +A++A  +++EQSPK+L+ VRGK+ +L+ + + P  I + L+
Subjt:  VAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV

Query:  DELKKFLDEELQRRI
         EL K LD EL+  +
Subjt:  DELKKFLDEELQRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCCATCTCTCCGCCGCTCGGTGTCGGACCCCCGCCTCTCCCGCCACCGCCGGCGCCGCCGCACGTTCTCCACCACCTCCTCCAAGTCCTCATGGAGCTCGAAGCTGGC
CAAAATCCTGGCCCGGCTGGCCCTCTTCTCCAGCGACTCTGAGCTGACAGAAGAAAGCCTCGAAGCCCACAACAAGAGAATCAGAGAAGAACTCGAACAACGACAGCTAC
ACGACAAAACCCCCAAATCCAGCCCCTACTACCGCGGCCTCACCGACTCCTCCCTCGCCATCAACTACCACCATGGGCCCCTCGCCACTCCCGGCCCGGCCCATCAACAA
CTCAGTGGGCCCCACTACGCCAGCTCATCCGCCACCCAAGTCACGTCCTTCTCCTCCATCGTCGTCTCCAAGCTCAAGGGGTGGGCCCCATGCCTCGGCAAATCCAACGA
CAAACCGGCCCCCGGCCCCGACAAGAACAACAATAACAATAGCATCATCCAAAACATCCCCACCGTGACCAAAACGGCGTCGTCTTCGTCGTCAAAGCCGAAGCCGGAGC
CGGTCAGGAGATCGGAGGAGGCGTTGAATATTAGTAATGATGATGGTGATCATCAAGAGAAGCTGTTGAGGGAGAGATCATTACAGAGCCAGCGAGGCGGCGGCGGGGGA
GAGGTGGCGGAGAAGGAGAGGTACACGTGGGGGGACAAGTACAGGCCGAAGGTGCTGGAGGAGTTCATATGCAACAGGAGGAAGGCGAGGCAGCTGAAGGAGGTGGTGAG
AGAGAAGGGGTGCGGGAATTACATATTTGAAGGACCGCCGGGAGTGGGAAAGAGGACCATGATTCGGGCCATGCTTCGAGAAGCTTTTGGACACCAAGCAATGGAGATTA
AGGAAGTTGTCAGGGTTTTTGACTTGAAGAGTGAAATGGTGGGGAGAATAGAAGTAAAGGTGAGGGAATCATCTCACTACGTGGAAGTCAATCTTTCACAAACCAAAGGT
TTTGAGAAACAAGTCATCGTCCAACTCATCAAAGAAACTCACTCCCCTTTGCCATGTAATCATTCCAATTGTCAAGGGATATTGCTGTGTGAAGCAGAAAAGCTATCAAA
TGAAACCCTAATGTATGTAAAATGGGCGATTGAAAGGAACAAAGGATGCAGCAAAATCTTCTTCTGCTGCTCTGATGTCTCCAAGCTTCTCCCTCTTACCTCCCTCTGCA
CTCTCATTCACCTCTCCCCACCTTCAAAACAAGAGATTGTGGAAGTCCTCGAATTCGTAGCAAAACAAGAAGGATTCGACTTGTCGACTCGGTTGGCGGAGAGGATCGCC
GACAATTCCAAGAACAACCTCCGACAAGCCATTCGATCCCTAGAAGCTTCCTGGAATAAAAGTCAATTGTTTGAAGAAGATGAGAATCAACTGTTGACTGGTTGGGAAGA
TGATATTGCAGATGTTGCTAAGAAGATTGTCGAGGAACAAAGCCCAAAACAGTTGTATATTGTTCGTGGAAAGCTTAAAAAACTTATCGAACATGATGTCTCCCCCAACT
TCATTTTTAGGACTTTGGTGGACGAATTAAAGAAGTTTTTGGACGAAGAATTACAGCGTCGAATTGAAGGTCTTTATGCTGATTATAACAAAATAGAGGAAAAGACATTT
GTTAGTGATCAACAAGGCAATGGGGAAGAGGCAGTGGCCAAAGTGCTGCATGACCCTATGAGAAAGAACGTTCACCACTTCATGAAGATCGAAGGT
mRNA sequenceShow/hide mRNA sequence
AACCCATCTCTCCGCCGCTCGGTGTCGGACCCCCGCCTCTCCCGCCACCGCCGGCGCCGCCGCACGTTCTCCACCACCTCCTCCAAGTCCTCATGGAGCTCGAAGCTGGC
CAAAATCCTGGCCCGGCTGGCCCTCTTCTCCAGCGACTCTGAGCTGACAGAAGAAAGCCTCGAAGCCCACAACAAGAGAATCAGAGAAGAACTCGAACAACGACAGCTAC
ACGACAAAACCCCCAAATCCAGCCCCTACTACCGCGGCCTCACCGACTCCTCCCTCGCCATCAACTACCACCATGGGCCCCTCGCCACTCCCGGCCCGGCCCATCAACAA
CTCAGTGGGCCCCACTACGCCAGCTCATCCGCCACCCAAGTCACGTCCTTCTCCTCCATCGTCGTCTCCAAGCTCAAGGGGTGGGCCCCATGCCTCGGCAAATCCAACGA
CAAACCGGCCCCCGGCCCCGACAAGAACAACAATAACAATAGCATCATCCAAAACATCCCCACCGTGACCAAAACGGCGTCGTCTTCGTCGTCAAAGCCGAAGCCGGAGC
CGGTCAGGAGATCGGAGGAGGCGTTGAATATTAGTAATGATGATGGTGATCATCAAGAGAAGCTGTTGAGGGAGAGATCATTACAGAGCCAGCGAGGCGGCGGCGGGGGA
GAGGTGGCGGAGAAGGAGAGGTACACGTGGGGGGACAAGTACAGGCCGAAGGTGCTGGAGGAGTTCATATGCAACAGGAGGAAGGCGAGGCAGCTGAAGGAGGTGGTGAG
AGAGAAGGGGTGCGGGAATTACATATTTGAAGGACCGCCGGGAGTGGGAAAGAGGACCATGATTCGGGCCATGCTTCGAGAAGCTTTTGGACACCAAGCAATGGAGATTA
AGGAAGTTGTCAGGGTTTTTGACTTGAAGAGTGAAATGGTGGGGAGAATAGAAGTAAAGGTGAGGGAATCATCTCACTACGTGGAAGTCAATCTTTCACAAACCAAAGGT
TTTGAGAAACAAGTCATCGTCCAACTCATCAAAGAAACTCACTCCCCTTTGCCATGTAATCATTCCAATTGTCAAGGGATATTGCTGTGTGAAGCAGAAAAGCTATCAAA
TGAAACCCTAATGTATGTAAAATGGGCGATTGAAAGGAACAAAGGATGCAGCAAAATCTTCTTCTGCTGCTCTGATGTCTCCAAGCTTCTCCCTCTTACCTCCCTCTGCA
CTCTCATTCACCTCTCCCCACCTTCAAAACAAGAGATTGTGGAAGTCCTCGAATTCGTAGCAAAACAAGAAGGATTCGACTTGTCGACTCGGTTGGCGGAGAGGATCGCC
GACAATTCCAAGAACAACCTCCGACAAGCCATTCGATCCCTAGAAGCTTCCTGGAATAAAAGTCAATTGTTTGAAGAAGATGAGAATCAACTGTTGACTGGTTGGGAAGA
TGATATTGCAGATGTTGCTAAGAAGATTGTCGAGGAACAAAGCCCAAAACAGTTGTATATTGTTCGTGGAAAGCTTAAAAAACTTATCGAACATGATGTCTCCCCCAACT
TCATTTTTAGGACTTTGGTGGACGAATTAAAGAAGTTTTTGGACGAAGAATTACAGCGTCGAATTGAAGGTCTTTATGCTGATTATAACAAAATAGAGGAAAAGACATTT
GTTAGTGATCAACAAGGCAATGGGGAAGAGGCAGTGGCCAAAGTGCTGCATGACCCTATGAGAAAGAACGTTCACCACTTCATGAAGATCGAAGGT
Protein sequenceShow/hide protein sequence
NPSLRRSVSDPRLSRHRRRRRTFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQ
LSGPHYASSSATQVTSFSSIVVSKLKGWAPCLGKSNDKPAPGPDKNNNNNSIIQNIPTVTKTASSSSSKPKPEPVRRSEEALNISNDDGDHQEKLLRERSLQSQRGGGGG
EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKG
FEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIA
DNSKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTF
VSDQQGNGEEAVAKVLHDPMRKNVHHFMKIEG