; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0308 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0308
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionhistone deacetylase complex subunit SAP18
Genome locationMC05:2342678..2345758
RNA-Seq ExpressionMC05g0308
SyntenyMC05g0308
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147400.1 histone deacetylase complex subunit SAP18 [Momordica charantia]2.46e-10195.48Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

XP_022943948.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]1.01e-9690.97Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

XP_022974173.1 histone deacetylase complex subunit SAP18-like [Cucurbita maxima]1.01e-9690.97Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

XP_023538738.1 histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]4.57e-9790.97Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

XP_031737715.1 histone deacetylase complex subunit SAP18 isoform X1 [Cucumis sativus]3.00e-9992.26Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYG PPR  H PPRPRLEPVDREKTCPLLLRVFTK G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFV+REILF  VKVGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

TrEMBL top hitse value%identityAlignment
A0A1S3AVL4 histone deacetylase complex subunit SAP183.02e-9589.68Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFV+RE       VGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

A0A5D3D2K7 Histone deacetylase complex subunit SAP183.02e-9589.68Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFV+RE       VGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

A0A6J1D024 histone deacetylase complex subunit SAP181.19e-10195.48Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

A0A6J1FXI8 histone deacetylase complex subunit SAP18-like4.88e-9790.97Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

A0A6J1IFF7 histone deacetylase complex subunit SAP18-like4.88e-9790.97Show/hide
Query:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
        LVYPDRHGRFVVRE       VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP185.0e-2853.12Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+EI       G T 
Subjt:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF

Query:  SFGNGRLDDSLALAELGFQIGDYLDVAI
        S G    DDS+ L    FQIGDYLD+AI
Subjt:  SFGNGRLDDSLALAELGFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP186.6e-2853.12Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+EI       G T 
Subjt:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF

Query:  SFGNGRLDDSLALAELGFQIGDYLDVAI
        S G    DDS+ L    FQIGDYLD+AI
Subjt:  SFGNGRLDDSLALAELGFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP182.2e-4766.24Show/hide
Query:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI
        FA VYP+  G + VRE       VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Subjt:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP185.0e-2853.12Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+EI       G T 
Subjt:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF

Query:  SFGNGRLDDSLALAELGFQIGDYLDVAI
        S G    DDS+ L    FQIGDYLD+AI
Subjt:  SFGNGRLDDSLALAELGFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP185.0e-2853.12Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+EI       G T 
Subjt:  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTF

Query:  SFGNGRLDDSLALAELGFQIGDYLDVAI
        S G    DDS+ L    FQIGDYLD+AI
Subjt:  SFGNGRLDDSLALAELGFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P181.5e-4866.24Show/hide
Query:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI
        FA VYP+  G + VRE       VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Subjt:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P188.5e-4764.33Show/hide
Query:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI
        FA VYP+  G +           VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Subjt:  FALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTT
GTAGTGAGAGAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGG
AGATTACTTGGATGTGGCAATTTTATAG
mRNA sequenceShow/hide mRNA sequence
CGTGAAAGTTTATTTTAATTTGTTGATTTTTTGAAAAAGAATCTTACGTGGGCTCATCATAACTGAGGCCCAACTTTCAAGGCCCAAGAATAAGGCATCCGGGCCTCGCT
TATAAACTAGCGAAGCTTCCAGAACGAACGGTAGAAGAGAGAGAAAGAGAGTGAGAGAGAAATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGA
GAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAA
GACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGC
CAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCT
CATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAGAGAAGATTGGTGCCTTTACAA
GTTTACATGCTAATGGCTATGGTGACTCGTAAAGATATTGTGGGGCATGACTCTTTTCCCCAGTGAATAACAAACGAATGGGGACATAAACATTAGCTTAAATCTCGTAA
TGTAAACTAATTTCTTGGAAATCCTTGGCATACTTTTCCTTGTTCCCTTGAACTTATTATGTAGAATCATGATAGTCATTAGTGGGATAATTTGAGTTTTCTTTGATAAC
GGT
Protein sequenceShow/hide protein sequence
MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRF
VVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL