; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0453 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0453
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationMC05:3341645..3345044
RNA-Seq ExpressionMC05g0453
SyntenyMC05g0453
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650222.1 hypothetical protein Csa_011015 [Cucumis sativus]2.08e-16196.06Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT

XP_004133800.1 serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus]6.99e-17196.06Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT

XP_022147391.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia]4.11e-181100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT

XP_023539917.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp. pepo]4.19e-16291.67Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        M+PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDNM FG+DRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRRAAYGRPGDS PYRRSPSP  R
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
        RRPSPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEYGR+RSRSPIRRSRT
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT

XP_038893478.1 serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]8.87e-17496.85Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA YGRPGDS PYRRSPSP FR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG--RFRSRSPIRRSRT
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG  RFRSRSPIRRSRT
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG--RFRSRSPIRRSRT

TrEMBL top hitse value%identityAlignment
A0A0A0L8H4 Uncharacterized protein3.38e-17196.06Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT

A0A1S3AUZ7 serine/arginine-rich splicing factor RS31-like isoform X13.38e-17196.06Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT

A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X23.38e-17196.06Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT

A0A6J1D279 serine/arginine-rich splicing factor RS31-like isoform X11.99e-181100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT

A0A6J1ICY3 serine/arginine-rich splicing factor RS31-like9.63e-16190.87Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        M+PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDNM FG+DRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR AYG PGDS PYRRSPSP  R
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
        RRPSPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEYGR+RSRSPIRRSRT
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS311.2e-9571.86Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  FGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR  +   R   S  Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSP-------DYGRNRSPEYGRFRSRSPIRRSR
           RRPSPDYGRARSP YDRY GP  YERRRSP       DYGR RSP Y R+RSRSP+ R R
Subjt:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSP-------DYGRNRSPEYGRFRSRSPIRRSR

P92965 Serine/arginine-rich splicing factor RS401.0e-7058.65Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR R  + SP RR R
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR

P92966 Serine/arginine-rich splicing factor RS411.3e-7057.03Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGER---GRHRDGSKSIANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGER---GRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRSP
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR       D SP   RRSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRSP

Query:  SPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSR
        SP  R R SPDYGR  SP   +       R SPDYGR R       RS SP +R+R
Subjt:  SPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSR

Q9NEW6 Probable splicing factor, arginine/serine-rich 32.5e-1631.6Show/hide
Query:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARG------------ERGRH--------
        ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   + +D RR+ VE+ RG            + G H        
Subjt:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARG------------ERGRH--------

Query:  RDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP
        R G +    QR T    ++   P     +D++ H    G V    + R+    V+F   ED   A+     +K         Y  +R+D   G       
Subjt:  RDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP

Query:  RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSP
             G  G      RS SP   RR SP Y   RS           R RS    R+RS    R  SRSP
Subjt:  RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A2.1e-9271.71Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFRSRSP
         +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YGR R+RSP
Subjt:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFRSRSP

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-9371.71Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFRSRSP
         +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YGR R+RSP
Subjt:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFRSRSP

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-7770.14Show/hide
Query:  IDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RR
Subjt:  IDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERR
        NFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP +RRRPSPDY R RSP YDRY G  PYERR
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERR

Query:  RSPDYGRNRSPEYGRFRSRSP
        +SPDYGR RS +YGR R+RSP
Subjt:  RSPDYGRNRSPEYGRFRSRSP

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-9771.86Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  FGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR  +   R   S  Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSP-------DYGRNRSPEYGRFRSRSPIRRSR
           RRPSPDYGRARSP YDRY GP  YERRRSP       DYGR RSP Y R+RSRSP+ R R
Subjt:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSP-------DYGRNRSPEYGRFRSRSPIRRSR

AT4G25500.1 arginine/serine-rich splicing factor 357.3e-7258.65Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR R  + SP RR R
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR

AT4G25500.4 arginine/serine-rich splicing factor 357.3e-7258.65Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR R  + SP RR R
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFR--SRSPIRRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTT
TGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGG
GTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATT
GAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTTGAGTGTAC
CCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGAC
GACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGC
CCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGTCGTTCACCCATTCGGCGGTCAAGAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATCTTCTCGTTCTAATATTTTTAAATCCCCGAAAACCCCTTCTGGCAATCTAACGGTGAAGCCTCGGTCAATAAAACATTCTATGTAAAGTCAGTTAATCGAACGGTCGA
AATATTTCGTCCGGTATCAATGCTAAGGCTTTCTTCGGCTATTTAAAAAGAATCAATCGGCTTACATAGGGTTTCATCGAAAAGACACAGACTTTCTCTTCGTTTCTCTC
CTAGGGTTTTTCTTCTCCCGTTCGAATCGAAGAATCTGCGAGCGCGATTGACAGTAGCAACTATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCG
GAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCG
TGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGA
GGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATTGAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGA
AGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTT
GAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGACGACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTC
GACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGCCCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCT
GAATATGGTAGATTTCGTAGTCGTTCACCCATTCGGCGGTCAAGAACCTGAAGGAAATCAACGTTTAAGTTTCAGTTACATTCTTAGGTTTAGGGATATGATGGAGTGTT
TAAGATAGTGACTAGTTCTCTGTACAACCCGTATTGTTGGTAGTTCATTCTAAGACAATGAGATACACGTTTATCTCTGTTTAACTAGCTGGGTGATGTTAGTACATGTC
AAGGTGATTGTGTTGTCTCCACTGTCAATGCTAATTCCACTTTAATTACAACGTTGGA
Protein sequenceShow/hide protein sequence
MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDI
ERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG
PYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT