; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0472 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0472
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAlba domain-containing protein
Genome locationMC05:3460823..3462491
RNA-Seq ExpressionMC05g0472
SyntenyMC05g0472
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018769.1 hypothetical protein SDJN02_20642 [Cucurbita argyrosperma subsp. argyrosperma]5.90e-7687.33Show/hide
Query:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMA--IPTVVTIAEILKKN
        MES +VVSEA +EVK+EIRNE EKLLVVAPDG+VKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMA--IPTVVTIAEILKKN

Query:  GLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        GLA +K LTISSVSLKNGENDRLVMKPKIEIAL+NAEK K I TATTSED
Subjt:  GLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

XP_008438573.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]7.84e-7686.49Show/hide
Query:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+S  VVSEAT EVK+EI+NE EKLLV APD +VKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +KNLTISSVSLKNGEN +LVMKPKIEIALVNAEK KNI TA TSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

XP_022147424.1 uncharacterized protein At2g34160-like [Momordica charantia]2.61e-92100Show/hide
Query:  MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA
        MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA
Subjt:  MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA

Query:  SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC
        SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC
Subjt:  SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]4.06e-7888.51Show/hide
Query:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES +VVSEA +E+K+EIRNE EKLLVVAPDG+VKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +K LTISSVSLKNGENDRLVMKPKIEIAL+NAEK K I TATTSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]8.19e-7889.19Show/hide
Query:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES +VVSEAT EVK+EIRNE EKLLVVAPD +VKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +K LTISSVSLKNGENDRLVMKPKIEIAL+NAEK K I TATTSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

TrEMBL top hitse value%identityAlignment
A0A1S3AXD3 uncharacterized protein At2g34160-like3.79e-7686.49Show/hide
Query:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+S  VVSEAT EVK+EI+NE EKLLV APD +VKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +KNLTISSVSLKNGEN +LVMKPKIEIALVNAEK KNI TA TSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

A0A5D3CZ81 Alba DNA/RNA-binding protein3.79e-7686.49Show/hide
Query:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        M+S  VVSEAT EVK+EI+NE EKLLV APD +VKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +KNLTISSVSLKNGEN +LVMKPKIEIALVNAEK KNI TA TSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

A0A6J1D0Y9 uncharacterized protein At2g34160-like1.26e-92100Show/hide
Query:  MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA
        MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA
Subjt:  MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLA

Query:  SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC
        SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC
Subjt:  SEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC

A0A6J1EFH1 uncharacterized protein At2g34160-like1.96e-7888.51Show/hide
Query:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES +VVSEA +E+K+EIRNE EKLLVVAPDG+VKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESAIVVSEA-TEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +K LTISSVSLKNGENDRLVMKPKIEIAL+NAEK K I TATTSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

A0A6J1IXN8 uncharacterized protein At2g34160-like3.96e-7889.19Show/hide
Query:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
        MES +VVSEAT EVK+EIRNE EKLLVVAPD +VKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL
Subjt:  MESAIVVSEAT-EVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGL

Query:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED
        A +K LTISSVSLKNGENDRLVMKPKIEIAL+NAEK K I TATTSED
Subjt:  ASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSED

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341606.5e-2559.22Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A EK +  S+V +K+    R V K KIEI LV +EK   +M A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.8e-2558.25Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QY +VELSALGMAI TVVT+AEILK NG A EK +  S+V +K+    R V K KIEI L  +EK   +M A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein4.6e-2659.22Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A EK +  S+V +K+    R V K KIEI LV +EK   +M A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALVNAEKTKNIMTAT

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein1.3e-2552Show/hide
Query:  NEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRL
        +E+ +V+AP        V T    KKN+IQVSN KKP F+Y NL+KRYI+Q+NEVELSALGMAI TVVTI+EILK NGLA+EK +  S+V +K+    ++
Subjt:  NEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRL

Query:  VMKPKIEIALVNAEKTKNIMTATTS
        V K KIEI L  ++K  +++   T+
Subjt:  VMKPKIEIALVNAEKTKNIMTATTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCGCCATAGTCGTCTCGGAGGCCACTGAGGTCAAGAGTGAAATCCGAAACGAGAACGAAAAGCTTCTCGTCGTTGCTCCTGATGGTAAAGTCAAGGAGATTGC
TGTTTTGACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAACGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCCAAGAGGTACATTAAGCAGTACAACG
AAGTTGAGCTCTCTGCCTTAGGCATGGCTATACCCACAGTAGTGACAATTGCCGAGATTCTCAAGAAGAATGGATTGGCATCTGAAAAGAACTTGACGATATCTTCTGTC
AGTTTGAAGAATGGAGAAAATGACCGGCTGGTTATGAAACCTAAGATCGAGATTGCATTGGTAAATGCAGAAAAAACCAAGAACATTATGACTGCTACAACAAGTGAAGA
TTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGACTAAAAAAAAATTGTAAATTTTACTTCAAATTTATAATATTCCTCATATTTTCCGTTGCTTTCATTTCTTCATACAAGCAGTGGCGGAACAGTCACCGGAAAAT
GCAGTAACTGCCGTGCCGGTGTATGGCCGCTTAACGAATCCTTTGATACCCTTAACCGCCAAAACGCCTCCATCGGAACGAACACTGATTTCCTTCAACATCCTTCGCCT
TCCAAATCCTATATAAATTACTTCTGCAATTCGCTTTTATTGTACCAAAGTTCTTCTCAATTTGTAGTAGAATCTTTTCGTTCCTTCTGCACACTACTCTTTCAGCGACA
CGCAGAGAAATTCGGCAATGGAGTCCGCCATAGTCGTCTCGGAGGCCACTGAGGTCAAGAGTGAAATCCGAAACGAGAACGAAAAGCTTCTCGTCGTTGCTCCTGATGGT
AAAGTCAAGGAGATTGCTGTTTTGACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAACGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCCAAGAGGTA
CATTAAGCAGTACAACGAAGTTGAGCTCTCTGCCTTAGGCATGGCTATACCCACAGTAGTGACAATTGCCGAGATTCTCAAGAAGAATGGATTGGCATCTGAAAAGAACT
TGACGATATCTTCTGTCAGTTTGAAGAATGGAGAAAATGACCGGCTGGTTATGAAACCTAAGATCGAGATTGCATTGGTAAATGCAGAAAAAACCAAGAACATTATGACT
GCTACAACAAGTGAAGATTGTTGATACAAGTTTTGATAGCGTAGTATCATTCTTGGGTCTGGCTTGTCTTTAGAGGAAGCAGATTCAATCTAATAGAAGTTAGAACCTAA
GGAGAAGAGTTCCTCTTTTTTCCCATACTTCTTTCTTTGTAACTGAAAAACAACTTCAAATTGGATAAACAGACTGATCCCTTTTCTCTCTCTGTGTCTCTTGCACTCAC
GCACACACTAATTATCCAATTCTGAAGTCACCCACCAGGCGTCCATATGTAAATTCAAAATTTATTATAACAATTCATAAGGGACAAGGCTCCAATTTAACAAGGACTTC
AAAGAAAGTATAACTTTACAAGAATTTGGAATAAGATATCACTGCAGCGATAATTTGGCAAGGGTAAGGGCCAGTACCTTAACTCCATTTGCCATATCCTTAGCAGAAGC
AAATTCTTCGGGCTTGTGACTGTACCCT
Protein sequenceShow/hide protein sequence
MESAIVVSEATEVKSEIRNENEKLLVVAPDGKVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSV
SLKNGENDRLVMKPKIEIALVNAEKTKNIMTATTSEDC