; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0511 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0511
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein RDM1-like
Genome locationMC05:3859604..3860977
RNA-Seq ExpressionMC05g0511
SyntenyMC05g0511
Gene Ontology termsGO:0044030 - regulation of DNA methylation (biological process)
GO:0000419 - RNA polymerase V complex (cellular component)
InterPro domainsIPR015270 - Protein RDM1, plant
IPR036319 - RDM1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597432.1 Protein RDM1, partial [Cucurbita argyrosperma subsp. sororia]1.65e-10885.41Show/hide
Query:  SLSTKNYILYNMKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGK
        S +TK+ ILY MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+D  KIPAK +TSE    KRAEMYQEYM+ IPIPAHRGSVIPF TWMGLGK
Subjt:  SLSTKNYILYNMKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGK

Query:  SIKQLYGQPLHYLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        SIKQLY QPLHYLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  SIKQLYGQPLHYLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
KAG7028891.1 Protein RDM1 [Cucurbita argyrosperma subsp. argyrosperma]9.56e-10887.57Show/hide
Query:  LYNMKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQ
        LY MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+DD KIPAK +TSE    KRAEMYQEYM+ IPIPAHRGSVIPF TWMGLGKSIKQLY Q
Subjt:  LYNMKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQ

Query:  PLHYLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        PLHYLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  PLHYLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
XP_022159295.1 protein RDM1-like [Momordica charantia]4.43e-10890.23Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAK ITSE   TKRAEMYQEYM+ IPIPAHRGSVIPFTTW+GLGKSIKQLY QPL 
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S DEYKPLD++IHPSKAEAT+WMVEEIHRRTSSHHHV KLWLSD MHH YVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
XP_022974457.1 protein RDM1-like [Cucurbita maxima]1.80e-10788.51Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+DD KIPAK +TSE    KRAEMYQEYM+ IPIPA+RGSVIPFTTWMGLGKSIKQLYGQPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
XP_023538686.1 protein RDM1-like [Cucurbita pepo subsp. pepo]1.04e-10687.93Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+DD KIPAK +TS+    KRAEMYQEYM+ IPIPAHRGSVIPFTTWMGLGKSIKQLY QPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
TrEMBL top hitse value%identityAlignment
A0A6J1E3H6 protein RDM1-like2.15e-10890.23Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAK ITSE   TKRAEMYQEYM+ IPIPAHRGSVIPFTTW+GLGKSIKQLY QPL 
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S DEYKPLD++IHPSKAEAT+WMVEEIHRRTSSHHHV KLWLSD MHH YVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
A0A6J1GHM4 protein RDM1-like1.44e-10687.93Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+DD KIPAK +TSE    KRAEMYQEYM+ IPIPAHRGSVIPF TWMGLGKSIKQLY QPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
A0A6J1GV10 protein RDM11.87e-10286.21Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSE G QNDGFEFKPSMDD KIPAK +T+E    KRAEMYQEYM+ I IPA RGSVIPFTTWMGLGKSIKQLYGQPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNI LKQWDQLRF S+DEYKPLD+VIHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD MH  YVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
A0A6J1IGA1 protein RDM1-like8.73e-10888.51Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSEIGGQNDGFEFKPS+DD KIPAK +TSE    KRAEMYQEYM+ IPIPA+RGSVIPFTTWMGLGKSIKQLYGQPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNIQLKQWDQLRF S+DEYKPLD++IHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD+MH VYVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
A0A6J1INZ9 protein RDM1-like5.35e-10285.63Show/hide
Query:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH
        MKRPMPWNEQVD+ISSGESSSSDSE G QNDGFEFKPS+DD KIPAK +T+E    KRAEMYQEYM+ I IPA RGSVIPFTTWMGLGKSIKQLYGQPLH
Subjt:  MKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLH

Query:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
        YLTNI LKQWDQLRF S+DEYKPLD+VIHPSKAEATVW+VEEIHRRTSSHHHV KLWLSD MH  YVDSIFPQL
Subjt:  YLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQL
SwissProt top hitse value%identityAlignment
Q9LUJ3 Protein RDM12.0e-4150.92Show/hide
Query:  VDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNIQLKQW
        +++  SG+S SSD +        E       L    + +  E    +RAEMYQ+YM+ +PIP +RGS+IPFT+W+GL  S+KQLYGQPLHYLTN+ L++W
Subjt:  VDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNIQLKQW

Query:  DQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQ
        DQ RF +  E + LDS+IHP+KAEAT+W+VEEIHR T SH H+  LW SD M+H ++D IFP+
Subjt:  DQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQ
Arabidopsis top hitse value%identityAlignment
AT3G22680.1 RNA-DIRECTED DNA METHYLATION 11.4e-4250.92Show/hide
Query:  VDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNIQLKQW
        +++  SG+S SSD +        E       L    + +  E    +RAEMYQ+YM+ +PIP +RGS+IPFT+W+GL  S+KQLYGQPLHYLTN+ L++W
Subjt:  VDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSE-CFTKRAEMYQEYMR-IPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNIQLKQW

Query:  DQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQ
        DQ RF +  E + LDS+IHP+KAEAT+W+VEEIHR T SH H+  LW SD M+H ++D IFP+
Subjt:  DQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYVDSIFPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCGCAAACCCCAAAAGGGGTCTCTGGTCCCTCGATGGGTTTGAGTTTGTTGGATTGCTGAGCTTTTATTGGGTATCCGTTGCGAAACCCACATCCAACGACAGCTTCAG
CTTTACAAATCCACGCTCTCTCTCTCTATCTACGAAGAATTACATTCTTTACAATATGAAGAGGCCAATGCCGTGGAACGAACAAGTGGATATTATTTCATCAGGTGAAT
CTTCTTCCTCTGATTCAGAAATAGGAGGTCAAAATGATGGGTTTGAGTTCAAGCCTTCGATGGATGATTTGAAAATCCCTGCCAAAGGAATCACATCTGAATGTTTTACT
AAAAGGGCAGAAATGTATCAAGAATACATGAGAATACCAATTCCAGCACACCGTGGTTCTGTAATACCATTTACAACATGGATGGGATTGGGCAAATCTATAAAGCAGCT
ATATGGTCAGCCTTTGCATTACCTGACTAATATTCAACTAAAACAGTGGGATCAATTAAGATTCGTAAGTTTGGATGAATATAAGCCATTGGATTCTGTAATTCATCCGA
GTAAAGCCGAAGCAACCGTATGGATGGTTGAAGAGATTCATAGGCGCACCTCATCCCATCATCACGTTCCTAAACTTTGGCTATCAGACGCAATGCACCATGTGTATGTT
GACTCCATTTTCCCCCAACTA
mRNA sequenceShow/hide mRNA sequence
ACGCCGCAAACCCCAAAAGGGGTCTCTGGTCCCTCGATGGGTTTGAGTTTGTTGGATTGCTGAGCTTTTATTGGGTATCCGTTGCGAAACCCACATCCAACGACAGCTTC
AGCTTTACAAATCCACGCTCTCTCTCTCTATCTACGAAGAATTACATTCTTTACAATATGAAGAGGCCAATGCCGTGGAACGAACAAGTGGATATTATTTCATCAGGTGA
ATCTTCTTCCTCTGATTCAGAAATAGGAGGTCAAAATGATGGGTTTGAGTTCAAGCCTTCGATGGATGATTTGAAAATCCCTGCCAAAGGAATCACATCTGAATGTTTTA
CTAAAAGGGCAGAAATGTATCAAGAATACATGAGAATACCAATTCCAGCACACCGTGGTTCTGTAATACCATTTACAACATGGATGGGATTGGGCAAATCTATAAAGCAG
CTATATGGTCAGCCTTTGCATTACCTGACTAATATTCAACTAAAACAGTGGGATCAATTAAGATTCGTAAGTTTGGATGAATATAAGCCATTGGATTCTGTAATTCATCC
GAGTAAAGCCGAAGCAACCGTATGGATGGTTGAAGAGATTCATAGGCGCACCTCATCCCATCATCACGTTCCTAAACTTTGGCTATCAGACGCAATGCACCATGTGTATG
TTGACTCCATTTTCCCCCAACTA
Protein sequenceShow/hide protein sequence
AANPKRGLWSLDGFEFVGLLSFYWVSVAKPTSNDSFSFTNPRSLSLSTKNYILYNMKRPMPWNEQVDIISSGESSSSDSEIGGQNDGFEFKPSMDDLKIPAKGITSECFT
KRAEMYQEYMRIPIPAHRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNIQLKQWDQLRFVSLDEYKPLDSVIHPSKAEATVWMVEEIHRRTSSHHHVPKLWLSDAMHHVYV
DSIFPQL