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MC05g0526 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0526
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal L18p/L5e family protein
Genome locationMC05:3977476..3977849
RNA-Seq ExpressionMC05g0526
SyntenyMC05g0526
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656005.1 uncharacterized protein LOC101213193 [Cucumis sativus]1.74e-3760.26Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+G VKL E +KNK+ I ERE+ +VEKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
        L+                  ERIEGKL++VLQSVIDNG NV VKIKQQKR RK GR
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

XP_022138029.1 uncharacterized protein LOC111009286 [Momordica charantia]3.01e-3860.65Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+G+VKL E VKNK+ I ER++ +VEKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAG
        L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAG

XP_022934433.1 uncharacterized protein LOC111441610 isoform X1 [Cucurbita moschata]3.54e-3760.51Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSN-VEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGV
        LA+GHVKL E VKNK+ I ERE++N  EKKLRTPTFN               IS ASV AC+IHR TS+VV AV HSISKD+K  LTSRKDSSACAAVG 
Subjt:  LANGHVKLLERVKNKHGIREREDSN-VEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGV

Query:  DLS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
         L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G+
Subjt:  DLS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

XP_022973751.1 uncharacterized protein LOC111472322 [Cucurbita maxima]4.02e-3960.9Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+GHVKL E VKNK+ I ERE+++ EKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
        L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G+
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

XP_038896573.1 uncharacterized protein LOC120084825 [Benincasa hispida]5.98e-3862.09Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LANGHVKL E VKNK+ I ERE  +VEKKLRTPTFN               IS ASV ACVIHRVTS+VV AV HSIS D+K  LTSRKDSSAC AVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARK
        L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARK

TrEMBL top hitse value%identityAlignment
A0A0A0KSG6 Uncharacterized protein8.45e-3860.26Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+G VKL E +KNK+ I ERE+ +VEKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
        L+                  ERIEGKL++VLQSVIDNG NV VKIKQQKR RK GR
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

A0A1S3CAH6 uncharacterized protein LOC1034985148.89e-3760.78Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        L +G VKL E +KNK+ I ERE+ +VEKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARK
        L+                  ERIEGKL+VVLQSVIDNG NVKVKIKQQKR RK
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARK

A0A6J1C8X9 uncharacterized protein LOC1110092861.46e-3860.65Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+G+VKL E VKNK+ I ER++ +VEKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAG
        L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAG

A0A6J1F7N1 uncharacterized protein LOC111441610 isoform X11.71e-3760.51Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSN-VEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGV
        LA+GHVKL E VKNK+ I ERE++N  EKKLRTPTFN               IS ASV AC+IHR TS+VV AV HSISKD+K  LTSRKDSSACAAVG 
Subjt:  LANGHVKLLERVKNKHGIREREDSN-VEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGV

Query:  DLS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
         L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G+
Subjt:  DLS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

A0A6J1I8E0 uncharacterized protein LOC1114723221.95e-3960.9Show/hide
Query:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD
        LA+GHVKL E VKNK+ I ERE+++ EKKLRTPTFN               IS ASV AC+IHRVTS+VV AV HSISKD+K  LTSRKDSSACAAVG  
Subjt:  LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVD

Query:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR
        L+                  ERIEGKL++VLQSVIDNG NVKVKIKQQKR RK G+
Subjt:  LS------------------ERIEGKLKVVLQSVIDNG-NVKVKIKQQKRARKAGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08845.1 Ribosomal L18p/L5e family protein2.0e-0639.13Show/hide
Query:  DSNVEKKLRTPTFN--------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------------IEGKLKV
        D +V  K RT  +         IS   V A + HRVT    VAV  + SKD+K VL SR D  AC ++G  LSER                   EGK++ 
Subjt:  DSNVEKKLRTPTFN--------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------------IEGKLKV

Query:  VLQSVIDNGNVKVKI
        V+QS+IDNG + VKI
Subjt:  VLQSVIDNGNVKVKI

AT1G08845.2 Ribosomal L18p/L5e family protein2.0e-0639.13Show/hide
Query:  DSNVEKKLRTPTFN--------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------------IEGKLKV
        D +V  K RT  +         IS   V A + HRVT    VAV  + SKD+K VL SR D  AC ++G  LSER                   EGK++ 
Subjt:  DSNVEKKLRTPTFN--------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------------IEGKLKV

Query:  VLQSVIDNGNVKVKI
        V+QS+IDNG + VKI
Subjt:  VLQSVIDNGNVKVKI

AT3G22450.1 Ribosomal L18p/L5e family protein7.2e-1746.72Show/hide
Query:  GIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------
        G  +  +  V+K+ RT TFN               IS  SV ACVIHRVTS+ VV V HSISKD+K  L SR++ +ACAAVG  L++R            
Subjt:  GIREREDSNVEKKLRTPTFN---------------ISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSER------------

Query:  ------IEGKLKVVLQSVIDNG-NVKVKIKQQKRARK
              IEGKL+VVLQ++IDNG NVKVK+KQ+K  +K
Subjt:  ------IEGKLKVVLQSVIDNG-NVKVKIKQQKRARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGCTAATGGCCATGTAAAGCTTCTTGAACGTGTGAAGAACAAACATGGAATACGTGAAAGGGAGGACAGCAATGTTGAGAAGAAGCTCAGGACACCCACATTTAATAT
ATCGAATGCCTCGGTTTGTGCTTGCGTTATTCACCGAGTGACTAGCGAGGTCGTCGTTGCTGTGGAACATTCAATTTCTAAGGACATAAAATTGGTCCTGACTTCAAGGA
AGGATTCCTCTGCCTGTGCTGCTGTGGGAGTTGATTTGTCAGAGAGGATAGAAGGGAAGCTTAAAGTTGTGCTTCAGTCTGTCATTGATAATGGGAATGTGAAGGTAAAG
ATCAAGCAGCAAAAGAGAGCAAGGAAAGCTGGGAGA
mRNA sequenceShow/hide mRNA sequence
TTGGCTAATGGCCATGTAAAGCTTCTTGAACGTGTGAAGAACAAACATGGAATACGTGAAAGGGAGGACAGCAATGTTGAGAAGAAGCTCAGGACACCCACATTTAATAT
ATCGAATGCCTCGGTTTGTGCTTGCGTTATTCACCGAGTGACTAGCGAGGTCGTCGTTGCTGTGGAACATTCAATTTCTAAGGACATAAAATTGGTCCTGACTTCAAGGA
AGGATTCCTCTGCCTGTGCTGCTGTGGGAGTTGATTTGTCAGAGAGGATAGAAGGGAAGCTTAAAGTTGTGCTTCAGTCTGTCATTGATAATGGGAATGTGAAGGTAAAG
ATCAAGCAGCAAAAGAGAGCAAGGAAAGCTGGGAGA
Protein sequenceShow/hide protein sequence
LANGHVKLLERVKNKHGIREREDSNVEKKLRTPTFNISNASVCACVIHRVTSEVVVAVEHSISKDIKLVLTSRKDSSACAAVGVDLSERIEGKLKVVLQSVIDNGNVKVK
IKQQKRARKAGR