CuGenDBv2

Gene ID	MC05g0609
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	E3 ubiquitin-protein ligase RBBP6 isoform X2
Genome location	MC05:4687550..4688590
RNA-Seq Expression	MC05g0609
Synteny	MC05g0609
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]

1.09e-59

66.28

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Query:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD
        M MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDD
Subjt:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD

Query:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGI
        PE SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK+                           VEDSECG+
Subjt:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGI

XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]

1.93e-62

67.24

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Query:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD
        M MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKLHQDP+ FSSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDD
Subjt:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD

Query:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK
        PE SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK+                           VEDSECG+ K
Subjt:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK

XP_022138293.1 uncharacterized protein LOC111009505 [Momordica charantia]

2.32e-86

83.63

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Query:  MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS
        MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS
Subjt:  MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS

Query:  FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR
        FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQK+                           VEDSECGIAKR
Subjt:  FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]

2.44e-57

63.84

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Query:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNK----NKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR
         SFD+G AMNS+PKKQK K+KK KK  NK    NKRQK                          +IVEDS CG+ KR
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNK----NKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]

1.28e-61

66.67

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Query:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD
        M MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDD
Subjt:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD

Query:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK
        PE SFDEG +MNS+PKKQKKK+KKKK KN KNKRQKVE PL    Y L   +        +   VE + C + +
Subjt:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAK0 Uncharacterized protein

5.27e-60

66.28

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Query:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD
        M MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDD
Subjt:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD

Query:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGI
        PE SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK+                           VEDSECG+
Subjt:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGI

A0A1S3AY37 uncharacterized protein LOC103483832

9.33e-63

67.24

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Query:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD
        M MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKLHQDP+ FSSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDD
Subjt:  MAMEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDD

Query:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK
        PE SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK+                           VEDSECG+ K
Subjt:  PEGSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAK

A0A6J1CCM9 uncharacterized protein LOC111009505

1.12e-86

83.63

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Query:  MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS
        MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS
Subjt:  MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGS

Query:  FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR
        FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQK+                           VEDSECGIAKR
Subjt:  FDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X1

1.18e-57

63.84

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Query:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNK----NKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR
         SFD+G AMNS+PKKQK K+KK KK  NK    NKRQK                          +IVEDS CG+ KR
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNK----NKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

A0A6J1IUT6 uncharacterized protein LOC111479494

2.09e-57

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Query:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLPP----SRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKK--KNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR
         SFD+G AMNS+PKKQK K+KK KK  K  KNKRQK+                           VEDS CG+ KR
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKK--KNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18540.1 unknown protein

1.8e-29

58.33

Show/hide

Query:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF
        E+L+E+E+RALRGSKFAPL   PS S S   RL HPGGP+KTNKAAALAKFL RKL QDP+G +SIDP +++LAV+NAK T++SSG S+    I+HV +F
Subjt:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF

Query:  DDPEGSFD----EGGAMNSDPKK---QKKKDKKKKKKNNKNKRQ
        +D E S D    E   +N   KK   +KKK++KKKKKN K+K+Q
Subjt:  DDPEGSFD----EGGAMNSDPKK---QKKKDKKKKKKNNKNKRQ

AT5G18540.2 unknown protein

3.0e-29

56.64

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Query:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF
        E+L+E+E+RALRGSKFAPL   PS S S   RL HPGGP+KTNKAAALAKFL RKL QDP+G +SIDP +++LAV+NAK T++SSG S+    I+HV +F
Subjt:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF

Query:  DDPEGSFD----EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKV
        +D E S D    E   +N   KK+  K KK++KK  KNK+ K+
Subjt:  DDPEGSFD----EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGATGGAGGATCTGAGCGAAGAAGAGAGGCGCGCCTTACGCGGCAGCAAGTTCGCGCCCCTGCCGCCCTCTCGCTCCCTCTCAAGGCTGCCTCACCCTGGTGGCCC
TATCAAGACCAACAAGGCTGCGGCTCTTGCCAAGTTTCTCCACAGAAAACTCCACCAAGACCCCCATGGTTTCTCCTCCATCGATCCCAACATTCTCGACCTCGCCGTTC
GTAATGCCAAAGCCACTCTTCTTTCCAGTGGCACTTCAACCATTCGCCATGTGGACACATTTGATGACCCTGAGGGCTCTTTCGACGAAGGGGGTGCCATGAATTCTGAC
CCTAAAAAGCAAAAGAAGAAAGACAAAAAGAAGAAGAAGAAGAATAATAAGAATAAAAGGCAAAAGGTTGAAAATCCCCTCTCATGGTTTTGTTATAAGCTCTATGATTT
TAGTGGGTTTCTTGACAAATCTGTTGTTGTTCTGCAGATTGTGGAGGACTCCGAGTGTGGCATTGCAAAAAGG

mRNA sequence

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CGATTGCGTAATTTTTCTCTTTTATTTTTTTTAAAATATTGATTGAATAGTGGTATTAATTAATATCAAACCCCCCTAGACATCTGTTCGACGCGTCGTTTAGCAGCCGC
ACCAACAAACCCGACCCGACCCGAGAGAAATGTGCAAAGTTTGAGAAGAAGAGTTGAGATTGTGGAGGAGGAAAAAACAGAGAAGAAGAAAAGAATGGCGATGGAGGATC
TGAGCGAAGAAGAGAGGCGCGCCTTACGCGGCAGCAAGTTCGCGCCCCTGCCGCCCTCTCGCTCCCTCTCAAGGCTGCCTCACCCTGGTGGCCCTATCAAGACCAACAAG
GCTGCGGCTCTTGCCAAGTTTCTCCACAGAAAACTCCACCAAGACCCCCATGGTTTCTCCTCCATCGATCCCAACATTCTCGACCTCGCCGTTCGTAATGCCAAAGCCAC
TCTTCTTTCCAGTGGCACTTCAACCATTCGCCATGTGGACACATTTGATGACCCTGAGGGCTCTTTCGACGAAGGGGGTGCCATGAATTCTGACCCTAAAAAGCAAAAGA
AGAAAGACAAAAAGAAGAAGAAGAAGAATAATAAGAATAAAAGGCAAAAGGTTGAAAATCCCCTCTCATGGTTTTGTTATAAGCTCTATGATTTTAGTGGGTTTCTTGAC
AAATCTGTTGTTGTTCTGCAGATTGTGGAGGACTCCGAGTGTGGCATTGCAAAAAGG

Protein sequence

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MAMEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFDEGGAMNSD
PKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKR

MC05g0609 (gene) of Bitter gourd (Dali-11) v1 genome