; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0689 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0689
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionER membrane protein complex subunit 6
Genome locationMC05:5353566..5360572
RNA-Seq ExpressionMC05g0689
SyntenyMC05g0689
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]2.59e-6892.44Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_008450632.1 PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo]3.62e-6790.76Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL 
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]1.73e-74100Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]5.36e-6992.44Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

XP_022972030.1 ER membrane protein complex subunit 6 [Cucurbita maxima]1.08e-6892.44Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

TrEMBL top hitse value%identityAlignment
A0A1S3BQB0 ER membrane protein complex subunit 61.75e-6790.76Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL 
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1CBS9 ER membrane protein complex subunit 68.37e-75100Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1FFH8 ER membrane protein complex subunit 62.59e-6992.44Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6J1I7D9 ER membrane protein complex subunit 65.23e-6992.44Show/hide
Query:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS
        MAGYSS ASEKKS++A DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFI YFLVMAITS+GLAAKAGFSFHSYFESWNQILLDGFLS
Subjt:  MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLS

Query:  GLMSFVLFWTFAYDIVHIF
        GLMSFVLFWTFAYDIVHIF
Subjt:  GLMSFVLFWTFAYDIVHIF

A0A6P3YTB6 ER membrane protein complex subunit 61.87e-6082.5Show/hide
Query:  MAGYS-SAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFL
        MAG++ S ASEKKS EA +D+P FNAEN+Q+N+KIIYYSRTF+SIIGGVIAGILGFT LTGFI YFLVMAITS+GL AKAGFS HSYF SWNQI+LDGFL
Subjt:  MAGYS-SAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFL

Query:  SGLMSFVLFWTFAYDIVHIF
         GLMSFVLFWTFAYDIVHIF
Subjt:  SGLMSFVLFWTFAYDIVHIF

SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 62.7e-1340.4Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFI Y L   + SL L  KA   ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q68EU8 ER membrane protein complex subunit 62.1e-1342.39Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        ++ N  ++ Y RT +S + G  AGILG T L GFI YFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q6GLC5 ER membrane protein complex subunit 61.6e-1342.39Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        ++ N  ++ Y RT +S + G  AGILG T L GFI YFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q9BV81 ER membrane protein complex subunit 62.4e-1441.41Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFI Y L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Q9CQW0 ER membrane protein complex subunit 62.4e-1441.41Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFI Y L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWTF Y +VH++
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF

Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein1.0e-3970.54Show/hide
Query:  ASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVL
        +SEK+S +   D+P F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+ YF+VM ITS+GL AKAGFS   YF+SWN++L DGFL GLMSFVL
Subjt:  ASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVL

Query:  FWTFAYDIVHIF
        FWTFAYD+VHIF
Subjt:  FWTFAYDIVHIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGTTATTCCTCCGCTGCTTCTGAGAAGAAATCGACTGAGGCGGCCGACGATGTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATTATATATTA
CAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAGGCCTGACTGGATTTATATTATATTTCCTAGTCATGGCAATTACTTCACTTG
GACTTGCAGCTAAGGCTGGATTTTCTTTTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTTGATGGCTTTCTGAGTGGGCTTATGTCGTTCGTGCTCTTCTGGACA
TTTGCCTACGATATTGTTCACATATTCTGA
mRNA sequenceShow/hide mRNA sequence
AATAAATTTCAGAAACTAAATTCATAATCTAACGAAGAAATTATTTGCAGGCTAACGGGGAGGGACTTGACTTCACTACAAGATCCTCCGCTGCCGCTTCGACGAGGCTG
TTTATAGAACAAAGCTTTGCCCTACTCGCCTCGGATCGATCACAAATAACTGTTTCCTGGTATTGAAATTCAGATCAACATCGGCAGAAGCTATGGCTGGTTATTCCTCC
GCTGCTTCTGAGAAGAAATCGACTGAGGCGGCCGACGATGTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATTATATATTACAGCCGGACGTTTTTGTC
TATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAGGCCTGACTGGATTTATATTATATTTCCTAGTCATGGCAATTACTTCACTTGGACTTGCAGCTAAGGCTG
GATTTTCTTTTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTTGATGGCTTTCTGAGTGGGCTTATGTCGTTCGTGCTCTTCTGGACATTTGCCTACGATATTGTT
CACATATTCTGAGTCTGGAATGCTGGCTGGAATTCGAATCCTTGAGTAGCTGCAGGTTTCGGTACAACTGAGCTCAAGATGGGGAATTAACAACGAAACGATAATTAGAT
TGAGTTATATATTTTGATCCATTTCCAACTCCTAATGATATTGTGGCAAGTTTATTTCTCATTACCATGTTTAGAAAGTGTTCAAGATCAGAGCAGGATTCTCTGTGCTG
TATCAGTAAAGATAGGCATAGTTTTTATTTATTCCTTTTACCAGTTTGTGAGATTATTTGTTCAGCTAGAGTTGCACTTATCTTATATTCGTGGTCTTTTAAATGCGTTT
TTTCCCCGGAAAGGCCTTATAAATGTTCACGAGAACTCGTATGGGATTGCTTGGTAAAATTGATTATCTAGGAGTCGATTTACCTGCTCTGTTATAAGCGTAGGTTTAAA
TCCTTTTCGATTCCAGAATTTTTATGTTTATACTATTTTGATCTTTCTCTTTTAGTTTCTG
Protein sequenceShow/hide protein sequence
MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWT
FAYDIVHIF