; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0823 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0823
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionnuclear transport factor 2
Genome locationMC05:7119887..7122066
RNA-Seq ExpressionMC05g0823
SyntenyMC05g0823
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145223.1 nuclear transport factor 2 [Momordica charantia]5.93e-86100Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSFFVLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

XP_022932693.1 nuclear transport factor 2B-like [Cucurbita moschata]1.18e-8194.31Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

XP_022972136.1 nuclear transport factor 2B-like [Cucurbita maxima]3.40e-8194.31Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

XP_022979987.1 nuclear transport factor 2B [Cucurbita maxima]5.28e-8092.68Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+ NIVAKLT LPFQQCQHSV+TVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

XP_028093729.1 nuclear transport factor 2B [Camellia sinensis]3.72e-8092.68Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYYSTFDANR GLANLYQ++SMLTFEGQKIQG+QNIVAKLT LPFQQCQHS+TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

TrEMBL top hitse value%identityAlignment
A0A5J5AU07 NTF2 domain-containing protein3.63e-8091.87Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYY+TFDANRTGLANLYQ++SMLTFEGQKIQG+QNIVAKLT LPFQQCQHS+TTVDCQPSGP GG+LVFVSGNL+LAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

A0A6J1CVD4 nuclear transport factor 22.87e-86100Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSFFVLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

A0A6J1F2G7 nuclear transport factor 2B-like5.73e-8294.31Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

A0A6J1I548 nuclear transport factor 2B-like1.64e-8194.31Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQCQHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

A0A6J1IQ79 nuclear transport factor 2B2.56e-8092.68Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+ NIVAKLT LPFQQCQHSV+TVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+VLNDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

SwissProt top hitse value%identityAlignment
Q75AA5 Nuclear transport factor 24.9e-3456.1Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MD  A+A+ F E YY+ FD +R+ L NLY+D SMLTFE  ++QGA++IV KL  LPFQ+ QH +TT+D QP+ PNG VLV ++G+L +  EQ+A +FSQ+
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMP    S++V NDIFRLNY+
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

Q96VN3 Nuclear transport factor 21.2e-3255.37Show/hide
Query:  DPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMF
        D  ++A+ FV  YY TFD NR GLA LY+D+SMLTFE   IQG   I+ KLT LPFQ+ QH V+T+D QPSG +GG+LV V+G L +  E++ + ++Q F
Subjt:  DPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMF

Query:  HLMPTPQGSFFVLNDIFRLNY
         LMP   GS+FVLND+FRL Y
Subjt:  HLMPTPQGSFFVLNDIFRLNY

Q9C7F5 Nuclear transport factor 2B3.1e-5784.55Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC+H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

Q9FZK4 Nuclear transport factor 2A4.5e-5684.55Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYYSTFDANR GL +LYQ+ SMLTFEGQKIQG+QNIVAKLTGLPFQQC+H++TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

Q9XJ54 Nuclear transport factor 22.4e-4166.39Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MD DAVAKAFVEHYY TFD NR  L +LYQD SMLTFEGQ+  GA  I  KL  LPF QC H + TVDCQPSGP GG+LVFVSG+L+   ++H LKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNY
        F L+P   G+F+V ND+FRLNY
Subjt:  FHLMPTPQGSFFVLNDIFRLNY

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like2.2e-2656.31Show/hide
Query:  DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQM
        + VA AFV HYY  FD +R+ L++LY   S+LTFEGQ I G  NI  KL  LPF QC H ++TVD QPS   G  GG+LVFVSG++QL GE H L+FSQ+
Subjt:  DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHL
        + L
Subjt:  FHL

AT1G11570.2 NTF2-like4.1e-3659.84Show/hide
Query:  DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQM
        + VA AFV HYY  FD +R+ L++LY   S+LTFEGQ I G  NI  KL  LPF QC H ++TVD QPS   G  GG+LVFVSG++QL GE H L+FSQ 
Subjt:  DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNY
        FHL+P  QGSFFV N++FRLNY
Subjt:  FHLMPTPQGSFFVLNDIFRLNY

AT1G27310.1 nuclear transport factor 2A3.2e-5784.55Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAVAKAFVEHYYSTFDANR GL +LYQ+ SMLTFEGQKIQG+QNIVAKLTGLPFQQC+H++TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

AT1G27970.1 nuclear transport factor 2B2.2e-5884.55Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC+H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVLNDIFRLNYA

AT1G27970.2 nuclear transport factor 2B3.0e-5583.9Show/hide
Query:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM
        MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC+H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQM
Subjt:  MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQM

Query:  FHLMPTPQGSFFVLNDIF
        FHLMPTPQGSF+V NDIF
Subjt:  FHLMPTPQGSFFVLNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCGACGCGGTGGCGAAGGCATTCGTTGAACATTATTACTCCACCTTCGACGCCAATCGAACCGGTCTTGCGAATCTCTACCAGGACAATTCCATGTTGACGTT
TGAAGGTCAGAAGATCCAAGGCGCGCAGAATATCGTAGCCAAGCTCACTGGCCTCCCCTTCCAGCAGTGCCAGCACTCCGTTACCACCGTCGATTGCCAGCCTTCCGGCC
CCAACGGCGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAGCTTGCCGGAGAGCAACATGCGCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGC
TTCTTTGTGCTGAATGACATTTTCCGATTGAACTATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GCGACTGGCAATTGGCGTTAGAGTTACGCGAATTAAATTTAAAAAACACAAAAATAAATAAATAAATCCCGAAATCGGACGATTCTAACCCTCAAAATTCGTCGATACTA
TAAATTCTCGATTAACCCTCAAAGTTTCTGGAACCCTCGGCCAACGCTGTCGTCTCCATTTTTTCTCTGTAAAACTCAGCGTTGTTCTCAAGCAGGGCGGAGGAGAGCGA
GTCTCTGTTATCTCTTTCCCGGCGGCGGATTCGAAGATTGCGGTAATGGATCCCGACGCGGTGGCGAAGGCATTCGTTGAACATTATTACTCCACCTTCGACGCCAATCG
AACCGGTCTTGCGAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCGCGCAGAATATCGTAGCCAAGCTCACTGGCCTCCCCTTCCAGC
AGTGCCAGCACTCCGTTACCACCGTCGATTGCCAGCCTTCCGGCCCCAACGGCGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAGCTTGCCGGAGAGCAACATGCGCTC
AAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTTTGTGCTGAATGACATTTTCCGATTGAACTATGCTTGAAGTGAAGATTAATGGGTGGCCTG
AAATGTCACGATATTCAGCCAGTTTGTTTATCACCGTTGGGATTTTTTAGACATTTGAAATGGGAACTCGGATTATATTTTATTGTGTTTATGCTTCAATGTGTGCCTAT
AAAAAGTCGAATTTCTTGGTTGTCATTGAGAATTGATGAAATAGATGGTTTCATTCAGGTGATTTGCTCAATACTCCCTGCATACTATTCAGACACAAGTATATTATATG
CCGCACCATTATACGAGCAGAAAATCACCGCTCAATATTGGTTTATGACATAATGTTAATAAAACTTCTTCGGCATGGACATCGAAATACGCAATGTTCAAAATGGAATC
AAAATCAGA
Protein sequenceShow/hide protein sequence
MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS
FFVLNDIFRLNYA