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MC05g0832 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0832
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC05:7220859..7221017
RNA-Seq ExpressionMC05g0832
SyntenyMC05g0832
Gene Ontology termsGO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0048583 - regulation of response to stimulus (biological process)
GO:0005622 - intracellular (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.77e-1052.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.77e-1052.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.77e-1052.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]6.17e-1057.69Show/hide
Query:  KKKKVFLWSLANESRNTREKLQKKLPHWTLSPS-CCFCIKSAENPDHVFLHC
        K+ K FLWSLA  S NT +K+QK   H  LSPS CC C K  E  DH+FLHC
Subjt:  KKKKVFLWSLANESRNTREKLQKKLPHWTLSPS-CCFCIKSAENPDHVFLHC

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]2.05e-1057.41Show/hide
Query:  LPKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        + KK K FLWSLA  S N + KLQ+K P+ +LSPS C+ C+K AE  DH+FLHC
Subjt:  LPKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein8.59e-1152.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein8.59e-1152.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein8.58e-1152.83Show/hide
Query:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        PKK K F+W+L +   NT ++LQK+LP+WTLSP+ C+ C KS E+ +H+F+HC
Subjt:  PKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

A0A5D3C7R2 DUF21 domain-containing protein2.99e-1057.69Show/hide
Query:  KKKKVFLWSLANESRNTREKLQKKLPHWTLSPS-CCFCIKSAENPDHVFLHC
        K+ K FLWSLA  S NT +K+QK   H  LSPS CC C K  E  DH+FLHC
Subjt:  KKKKVFLWSLANESRNTREKLQKKLPHWTLSPS-CCFCIKSAENPDHVFLHC

A0A5D3E632 Protein FAM91A19.92e-1157.41Show/hide
Query:  LPKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC
        + KK K FLWSLA  S N + KLQ+K P+ +LSPS C+ C+K AE  DH+FLHC
Subjt:  LPKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCF-CIKSAENPDHVFLHC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTACCCAAAAAAAAAAAGGTATTTTTGTGGAGCTTGGCTAATGAAAGCCGTAACACACGTGAGAAGCTCCAAAAAAAGCTCCCTCACTGGACTTTATCGCCTTCATGCTG
CTTCTGTATTAAAAGCGCAGAAAATCCAGACCATGTATTCCTACATTGC
mRNA sequenceShow/hide mRNA sequence
CTACCCAAAAAAAAAAAGGTATTTTTGTGGAGCTTGGCTAATGAAAGCCGTAACACACGTGAGAAGCTCCAAAAAAAGCTCCCTCACTGGACTTTATCGCCTTCATGCTG
CTTCTGTATTAAAAGCGCAGAAAATCCAGACCATGTATTCCTACATTGC
Protein sequenceShow/hide protein sequence
LPKKKKVFLWSLANESRNTREKLQKKLPHWTLSPSCCFCIKSAENPDHVFLHC