; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0850 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0850
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontranscription factor DIVARICATA-like
Genome locationMC05:7432010..7432312
RNA-Seq ExpressionMC05g0850
SyntenyMC05g0850
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]3.08e-1752.5Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG
        RLF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKYY         LRQ +GK  R +SSI DITTVD    A+ + G
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG

XP_021730551.1 transcription factor SRM1-like [Chenopodium quinoa]3.67e-1852.87Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQP
        RLF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKYY         LRQ +GK  R +SSI DITTVD  S AR     + I QP
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQP

XP_022145130.1 transcription factor DIVARICATA-like [Momordica charantia]5.96e-3766.67Show/hide
Query:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPPSPP---QQFTI
        LF++G++ YG GNWK+IAT+ V+T+TSTQVASHAQKY  Y QNPN  + Q+NGKS R+KSSIFDIT VDPHS+ RLL    AP  +QPP PP   QQFTI
Subjt:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPPSPP---QQFTI

Query:  TNYYP
        TNYYP
Subjt:  TNYYP

XP_022145143.1 transcription factor SRM1-like [Momordica charantia]5.36e-1750Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG
        +LF+IG+Q+YGKG+WK IAT++ +TKT+ QVASHAQK+Y          R+ + +  R +SSI DITTVD  + +R L G
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG

XP_022145147.1 uncharacterized protein LOC111014661 [Momordica charantia]3.85e-3061.9Show/hide
Query:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPP---SPPQQFTI
        LF++G + YGKGNWK+I+TK+ +TKTSTQV SHAQKY+ Y+QNPN   +Q+NGKS  +KSSIF IT VDPHS A LL    AP  +QPP      QQFTI
Subjt:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPP---SPPQQFTI

Query:  TNYYP
        TNY+P
Subjt:  TNYYP

TrEMBL top hitse value%identityAlignment
A0A6J1CTL3 transcription factor DIVARICATA-like2.89e-3766.67Show/hide
Query:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPPSPP---QQFTI
        LF++G++ YG GNWK+IAT+ V+T+TSTQVASHAQKY  Y QNPN  + Q+NGKS R+KSSIFDIT VDPHS+ RLL    AP  +QPP PP   QQFTI
Subjt:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPPSPP---QQFTI

Query:  TNYYP
        TNYYP
Subjt:  TNYYP

A0A6J1CV56 transcription factor SRM1-like2.60e-1750Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG
        +LF+IG+Q+YGKG+WK IAT++ +TKT+ QVASHAQK+Y          R+ + +  R +SSI DITTVD  + +R L G
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHG

A0A6J1CVN6 uncharacterized protein LOC1110146611.86e-3061.9Show/hide
Query:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPP---SPPQQFTI
        LF++G + YGKGNWK+I+TK+ +TKTSTQV SHAQKY+ Y+QNPN   +Q+NGKS  +KSSIF IT VDPHS A LL    AP  +QPP      QQFTI
Subjt:  LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGH-API-VQPP---SPPQQFTI

Query:  TNYYP
        TNY+P
Subjt:  TNYYP

A0A7C8ZAH3 Uncharacterized protein6.67e-1855.26Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKAR
        RLF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKYY         LRQ +GK  R +SSI DITTVD  + AR
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKAR

A0A803N8C1 Uncharacterized protein1.78e-1852.87Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQP
        RLF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKYY         LRQ +GK  R +SSI DITTVD  S AR     + I QP
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQP

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS11.2e-0941.67Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI
        RLF++G+  +GKG+W+ I+   VI++T TQVASHAQKY+         +R  +    R +SSI DIT+V    +     G API
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI

Q2V9B0 Transcription factor MYB1R14.0e-1040.95Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITT----VDPHSKARLLHGHAPIVQPPSPPQQFTI
        +LF++G+Q  GKG+W+ I+   V T+T TQVASHAQKY+         LR+ N    R +SS+FDITT    V P  +        P+V P + P   T 
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITT----VDPHSKARLLHGHAPIVQPPSPPQQFTI

Query:  TNYYP
        TN +P
Subjt:  TNYYP

Q8LH59 Transcription factor MYBS11.2e-0941.67Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI
        RLF++G+  +GKG+W+ I+   VI++T TQVASHAQKY+         +R  +    R +SSI DIT+V    +     G API
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI

Q8S9H7 Transcription factor DIVARICATA1.6e-1147.14Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD
        +LF++G++ YGKG+W++I+   VIT+T TQVASHAQKY+         +RQ +G   + ++SI DITTV+
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD

Q9FNN6 Transcription factor SRM12.4e-1040Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSP
        RLF++G+  YGKG+W+ I+   V+T+T TQVASHAQKY+         +R  +    R +SSI DIT+V          G+A +  P  P
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSP

Arabidopsis top hitse value%identityAlignment
AT1G74840.1 Homeodomain-like superfamily protein7.5e-1250Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITT
        +LF++G+Q  GKG+WK I+   V T+TSTQVASHAQKY+         LR+ N    R +SS+FD+TT
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITT

AT2G38090.1 Duplicated homeodomain-like superfamily protein1.1e-1345.65Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPP
        R F++G++ YGKG+W++IA   V T+T TQVASHAQKY+         +RQ NG   + +SSI DITTV+ P S       +A    P SPP
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPP

AT5G01200.1 Duplicated homeodomain-like superfamily protein1.2e-1241.05Show/hide
Query:  FVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPPQQFTI
        F++G++ YGKG+W++IA   V T+T TQVASHAQKY+         LRQ      + +SSI DITTV+ P + A      A +   P+P   F +
Subjt:  FVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPPQQFTI

AT5G04760.1 Duplicated homeodomain-like superfamily protein2.1e-1445.36Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-----PHSKARLLHGHAPIVQPPSPPQ
        +LF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKY+         LRQ + K  R +SSI DITTVD     P S       H   VQ P   Q
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVD-----PHSKARLLHGHAPIVQPPSPPQ

AT5G58900.1 Homeodomain-like transcriptional regulator1.8e-1343.53Show/hide
Query:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIV
        +LF++G++ YGKG+W++I+   VIT+T TQVASHAQKY+         +RQ +G   + ++SI DITTV+   +A L    + IV
Subjt:  RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTTATTTGTGATCGGGATTCAGATGTATGGAAAAGGAAATTGGAAAGATATTGCAACAAAATTGGTGATCACAAAAACTTCCACACAGGTGGCAAGCCATGCCCAAAA
GTACTATGACTATCACCAAAACCCTAACCCTAATTTAAGACAGAAAAATGGAAAGAGTGGCAGGGCCAAGTCCAGTATTTTCGACATCACCACCGTAGATCCCCACTCCA
AGGCGCGCTTGCTTCACGGTCATGCGCCCATTGTTCAACCACCTTCGCCGCCTCAACAATTTACCATTACCAATTACTATCCT
mRNA sequenceShow/hide mRNA sequence
AGGTTATTTGTGATCGGGATTCAGATGTATGGAAAAGGAAATTGGAAAGATATTGCAACAAAATTGGTGATCACAAAAACTTCCACACAGGTGGCAAGCCATGCCCAAAA
GTACTATGACTATCACCAAAACCCTAACCCTAATTTAAGACAGAAAAATGGAAAGAGTGGCAGGGCCAAGTCCAGTATTTTCGACATCACCACCGTAGATCCCCACTCCA
AGGCGCGCTTGCTTCACGGTCATGCGCCCATTGTTCAACCACCTTCGCCGCCTCAACAATTTACCATTACCAATTACTATCCT
Protein sequenceShow/hide protein sequence
RLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSPPQQFTITNYYP