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MC05g0853 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0853
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein RETICULATA, chloroplastic
Genome locationMC05:7480819..7481013
RNA-Seq ExpressionMC05g0853
SyntenyMC05g0853
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0046483 - heterocycle metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:1901360 - organic cyclic compound metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN80093.1 hypothetical protein VITISV_010721 [Vitis vinifera]1.24e-0537.5Show/hide
Query:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW
        +++DHLFLHC+ T  LW  LF    +  V P+S+ + L  + +   + K+ I LW NA  +L W
Subjt:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW

RVW30962.1 putative ribonuclease H protein [Vitis vinifera]1.21e-0538.46Show/hide
Query:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW
        E +S+DH+ LHC    SLW  LF +F +S VLP SV   LL         ++  +W +A   L W
Subjt:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW

RVW96169.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]8.94e-0638.46Show/hide
Query:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW
        E +S+DH+ LHC  T SLW  LF +F +S VLP S+   LL  L      ++  +W +    L W
Subjt:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW

RVX00839.1 putative ribonuclease H protein [Vitis vinifera]4.72e-0637.5Show/hide
Query:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW
        +++DHLFLHC+ T  LW  LF +  +  V P+S+ N L  + + + + K+ I LW +A  +L W
Subjt:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW

RVX20160.1 Protein RETICULATA, chloroplastic [Vitis vinifera]1.90e-0642.19Show/hide
Query:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKN-ILWCNAIASLQW
        +S+DHLFLHC  TN LW  LF++  +S V P+S+++ L+ S     N  +  ILW  A  +L W
Subjt:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKN-ILWCNAIASLQW

TrEMBL top hitse value%identityAlignment
A0A438D6D7 Putative ribonuclease H protein5.87e-0638.46Show/hide
Query:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW
        E +S+DH+ LHC    SLW  LF +F +S VLP SV   LL         ++  +W +A   L W
Subjt:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW

A0A438IHR4 Transposon TX1 uncharacterized 149 kDa protein4.33e-0638.46Show/hide
Query:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW
        E +S+DH+ LHC  T SLW  LF +F +S VLP S+   LL  L      ++  +W +    L W
Subjt:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW

A0A438IVR5 Putative ribonuclease H protein2.29e-0637.5Show/hide
Query:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW
        +++DHLFLHC+ T  LW  LF +  +  V P+S+ N L  + + + + K+ I LW +A  +L W
Subjt:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNI-LWCNAIASLQW

A0A438KG54 Protein RETICULATA, chloroplastic9.20e-0742.19Show/hide
Query:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKN-ILWCNAIASLQW
        +S+DHLFLHC  TN LW  LF++  +S V P+S+++ L+ S     N  +  ILW  A  +L W
Subjt:  KSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKN-ILWCNAIASLQW

A0A5B7C971 zf-RVT domain-containing protein (Fragment)3.14e-0636.92Show/hide
Query:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW
        E +S+DHLF+HC+F+ ++W  LF +F L  V+P+SV   LL          K  LW  +   + W
Subjt:  ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGGAAATCATTAGATCATTTGTTCCTGCACTGCGCCTTCACAAACTCTCTATGGCCGCACCTATTTCACATTTTCCATCTCTCCACTGTGCTCCCTAAATCCGTCGA
CAATTTTCTTTTAGAGAGCCTCTCAAAGACTCCAAATTGTAAGAAAAACATCTTGTGGTGTAATGCCATTGCTTCTCTACAGTGG
mRNA sequenceShow/hide mRNA sequence
GAGAGGAAATCATTAGATCATTTGTTCCTGCACTGCGCCTTCACAAACTCTCTATGGCCGCACCTATTTCACATTTTCCATCTCTCCACTGTGCTCCCTAAATCCGTCGA
CAATTTTCTTTTAGAGAGCCTCTCAAAGACTCCAAATTGTAAGAAAAACATCTTGTGGTGTAATGCCATTGCTTCTCTACAGTGG
Protein sequenceShow/hide protein sequence
ERKSLDHLFLHCAFTNSLWPHLFHIFHLSTVLPKSVDNFLLESLSKTPNCKKNILWCNAIASLQW