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MC05g0858 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0858
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontranscription factor SRM1-like
Genome locationMC05:7540966..7541151
RNA-Seq ExpressionMC05g0858
SyntenyMC05g0858
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMS97920.1 hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]6.48e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]2.60e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

XP_021730551.1 transcription factor SRM1-like [Chenopodium quinoa]3.30e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

XP_021856464.1 transcription factor DIVARICATA-like [Spinacia oleracea]3.41e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

XP_022145143.1 transcription factor SRM1-like [Momordica charantia]5.27e-3298.39Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        +LFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

TrEMBL top hitse value%identityAlignment
A0A0K9Q782 Uncharacterized protein1.65e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

A0A6J1CV56 transcription factor SRM1-like2.55e-3298.39Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        +LFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

A0A7C8ZAH3 Uncharacterized protein1.55e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

A0A7N0RD48 Uncharacterized protein1.44e-1765.57Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGLQ YGKG W+SI+ +V +T+T  QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

A0A803N8C1 Uncharacterized protein1.60e-1767.21Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        RLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS11.5e-1053.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Q2V9B0 Transcription factor MYB1R13.6e-0950Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        +LFL+GLQ  GKG W+ I+     T+T  QVASHAQK++ R+ +  + R+RSS+ DITT  V
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

Q8LH59 Transcription factor MYBS11.5e-1053.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Q8S9H7 Transcription factor DIVARICATA7.7e-1251.61Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        +LFL+GL+ YGKG W++I+    +T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV++
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

Q9FNN6 Transcription factor SRM11.3e-1158.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Arabidopsis top hitse value%identityAlignment
AT2G38090.1 Duplicated homeodomain-like superfamily protein1.6e-1251.61Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        R FL+GL+ YGKG W++IA     T+T  QVASHAQK++ R+++  + ++RSSI+DITTV++
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

AT5G01200.1 Duplicated homeodomain-like superfamily protein1.6e-1253.33Show/hide
Query:  FLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        FL+GL+ YGKG W++IA     T+T  QVASHAQK++ R+L+  + ++RSSI+DITTV++
Subjt:  FLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

AT5G04760.1 Duplicated homeodomain-like superfamily protein3.4e-1563.93Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        +LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

AT5G08520.1 Duplicated homeodomain-like superfamily protein9.3e-1358.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

AT5G58900.1 Homeodomain-like transcriptional regulator5.5e-1351.61Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        +LFL+GL+ YGKG W++I+    +T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV++
Subjt:  RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAA
GTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTAGATGTG
mRNA sequenceShow/hide mRNA sequence
AGGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAA
GTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTAGATGTG
Protein sequenceShow/hide protein sequence
RLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV