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MC05g0864 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0864
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontransportin-3 isoform X1
Genome locationMC05:7766599..7766910
RNA-Seq ExpressionMC05g0864
SyntenyMC05g0864
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449960.1 PREDICTED: transportin-3 isoform X2 [Cucumis melo]2.85e-1858.1Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S   +  I  +Y+   EPD++EA    A I +R  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
XP_011651344.1 transportin-3 isoform X3 [Cucumis sativus]2.85e-1858.1Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S   +  I  +Y+   EPD++EA    A I +R  HK  LAA+GSLLEVSFQK A   T MH GA LA MSYL CFLDVSL SIL
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
XP_022148142.1 transportin-3 isoform X1 [Momordica charantia]2.39e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
XP_022148144.1 transportin-3 isoform X2 [Momordica charantia]2.39e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
XP_022148146.1 transportin MOS14 isoform X3 [Momordica charantia]2.39e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
TrEMBL top hitse value%identityAlignment
A0A0A0L6T7 Uncharacterized protein1.08e-1858.1Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S   +  I  +Y+   EPD++EA    A I +R  HK  LAA+GSLLEVSFQK A   T MH GA LA MSYL CFLDVSL SIL
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
A0A1S3BNV6 transportin-3 isoform X21.38e-1858.1Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S   +  I  +Y+   EPD++EA    A I +R  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
A0A6J1D347 transportin-3 isoform X21.16e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
A0A6J1D496 transportin-3 isoform X11.16e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
A0A6J1D4H9 transportin MOS14 isoform X31.16e-1960Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL
        G LF+T F RFTYA S I    I  +Y+   EPD++EA    A I IR  HK  LAASGSLLEVSFQK A   T MH GA LA MSYL CFLDVSL S+L
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYVT--EPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYL-CFLDVSLTSIL

Query:  ETSST
        E +ST
Subjt:  ETSST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12930.1 ARM repeat superfamily protein3.6e-1451.96Show/hide
Query:  GFLFMTHFHRFTYATSFIFLLLIPCTYV--TEPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYLC-FLDVSLTSIL
        G LF+T F RFT A+S   L+ I  +Y+   EPD++EA    A   IRS HK  L  SG+LLE+SF K A   T MH GA LA MSYL  FL+VSL+S++
Subjt:  GFLFMTHFHRFTYATSFIFLLLIPCTYV--TEPDMMEAQ-KVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYLC-FLDVSLTSIL

Query:  ET
        ET
Subjt:  ET

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTTTTGTTTATGACCCATTTTCATAGGTTTACATACGCAACATCTTTTATTTTCTTATTGTTGATACCTTGTACTTATGTGACTGAACCTGATATGATGGAGGC
TCAAAAAGTTGCATATATTTCTATCCGAAGTCTCCATAAGGGAACATTAGCTGCATCCGGTTCTCTTTTGGAGGTTTCCTTCCAGAAGGTTGCTAAAGGTAGCACAACCA
TGCATCACGGGGCAGTTTTAGCAACAATGTCATACTTATGTTTCTTGGATGTTAGCCTAACTTCAATATTGGAAACTTCAAGTACC
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTTTTGTTTATGACCCATTTTCATAGGTTTACATACGCAACATCTTTTATTTTCTTATTGTTGATACCTTGTACTTATGTGACTGAACCTGATATGATGGAGGC
TCAAAAAGTTGCATATATTTCTATCCGAAGTCTCCATAAGGGAACATTAGCTGCATCCGGTTCTCTTTTGGAGGTTTCCTTCCAGAAGGTTGCTAAAGGTAGCACAACCA
TGCATCACGGGGCAGTTTTAGCAACAATGTCATACTTATGTTTCTTGGATGTTAGCCTAACTTCAATATTGGAAACTTCAAGTACC
Protein sequenceShow/hide protein sequence
MGFLFMTHFHRFTYATSFIFLLLIPCTYVTEPDMMEAQKVAYISIRSLHKGTLAASGSLLEVSFQKVAKGSTTMHHGAVLATMSYLCFLDVSLTSILETSST