; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0953 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0953
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
Genome locationMC05:10102563..10109424
RNA-Seq ExpressionMC05g0953
SyntenyMC05g0953
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656912.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Cucumis sativus]2.09e-16786.6Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        M+GA+ K  ++KDH S+DHTEGMRARPLH  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-
        PSIPAPPSPSLTLPP P P T R  VTNM SDESEMESSEE+VEGKY+ SGVSKTAK G KR RCETIVGPGIDKDVAHEAVGVKPS LVPKEIPMIKK 
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-

Query:  NPVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        NPV QI+I PKVIHDGK   INN+ EE EKE  DLKPYATLEDLERGKLPPEEILSLPMFKNYTAG+PTSVLYIKNLAKDV+NDDLYYIFG
Subjt:  NPVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

XP_022152394.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Momordica charantia]1.11e-202100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

XP_022152395.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2 [Momordica charantia]2.13e-202100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF

XP_022152396.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Momordica charantia]1.27e-202100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF

XP_022932769.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Cucurbita moschata]3.83e-16886.78Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD A+ K    KDH SKDHTEGMRARPLH  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-
        PS+PAPPS SLTLPP P P TPRP +TNMSSDESEMESSEE+VEGKY+SSGVSKTA+ GNKRSRCE IVGPGIDKDVAHE VGVKPS LVPKEIPMIKK 
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-

Query:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        NPVFQ KI PKV+HD    GK+D INNE+EE EKE  DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
Subjt:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

TrEMBL top hitse value%identityAlignment
A0A6J1DDU0 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X21.03e-202100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF

A0A6J1DFW4 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X15.37e-203100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

A0A6J1DHL2 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X36.15e-203100Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
        PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKN

Query:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
        PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF
Subjt:  PVFQIKIVPKVIHDGKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIF

A0A6J1EXB4 U11/U12 small nuclear ribonucleoprotein 65 kDa protein1.85e-16886.78Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD A+ K    KDH SKDHTEGMRARPLH  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-
        PS+PAPPS SLTLPP P P TPRP +TNMSSDESEMESSEE+VEGKY+SSGVSKTA+ GNKRSRCE IVGPGIDKDVAHE VGVKPS LVPKEIPMIKK 
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-

Query:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        NPVFQ KI PKV+HD    GK+D INNE+EE EKE  DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
Subjt:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

A0A6J1I4Z6 U11/U12 small nuclear ribonucleoprotein 65 kDa protein1.87e-16786.44Show/hide
Query:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MD A+ K  M KDH SKDHT GMRA PLH  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-
        PS+PAPPS SLTLPP P P TPRP +TNMSSDESEMESSEE+VEGKY+SSGVSKTA+ GNKRSRCE IVGPGIDKDVAHE VGVKPS LVPKEIPMIKK 
Subjt:  PSIPAPPSPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKK-

Query:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        NPVFQ KI PKV+HD    GK+D INNE+EE EKE  DLK YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
Subjt:  NPVFQIKIVPKVIHD----GKDDTINNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

SwissProt top hitse value%identityAlignment
F1Q8J0 RNA-binding region-containing protein 31.6e-2234.11Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRP-HVTNMSSD
        IA  LG+ +   P L+Y YPPP   ILTNI + L++VP+FY QVLHLMNKMN+P+PFR P+  PP    +P+ P P    PP P    P P H  + S +
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRP-HVTNMSSD

Query:  ESEMES-SEEEVEGKYHSSGVSK-------TAKLGNKRSRCETIVGPGIDKDVAHEAVG--VKPSPLVPKEIPMIKKNPVFQIKIVPKVIHDG-------
        ESE ES  EEE E      G+           K  +KR + +      I K  +H   G  ++P+ +  +   + +K   F I      I +G       
Subjt:  ESEMES-SEEEVEGKYHSSGVSK-------TAKLGNKRSRCETIVGPGIDKDVAHEAVG--VKPSPLVPKEIPMIKKNPVFQIKIVPKVIHDG-------

Query:  -----KDDTINNEL----------------------EEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYI
              +DT + E+                      EE E++E     + +  +LERG+L  +EI  L +FK Y  G PT  LY+KN+AK V   DL +I
Subjt:  -----KDDTINNEL----------------------EEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYI

Query:  FG
        +G
Subjt:  FG

Q3UZ01 RNA-binding region-containing protein 31.5e-2032.04Show/hide
Query:  LHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTP
        L V   IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP+       PPLP   
Subjt:  LHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTP

Query:  RPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCET---IVGPGIDKDVAHEAVGVKPS---PLVPKEI---PMIKKNPVFQIKI---VPK
             ++SS ESE ESS+E  E +   + + + A L  KR + E    +      KD+ +       S    L+P ++   P    N   +  I   +P 
Subjt:  RPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCET---IVGPGIDKDVAHEAVGVKPS---PLVPKEI---PMIKKNPVFQIKI---VPK

Query:  VIHDGKDDTINNELEEPEKEEPDL-----------KP------------------YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVV
          +   +   NNE E  +  +  L           KP                  + + ++LE+G++  EE+ +L +F++Y  G P   +Y+KNLA+ V 
Subjt:  VIHDGKDDTINNELEEPEKEEPDL-----------KP------------------YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVV

Query:  NDDLYYIFG
          DL +IFG
Subjt:  NDDLYYIFG

Q4G055 RNA-binding region-containing protein 33.1e-2332.92Show/hide
Query:  LHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTP-----------PLPPSIPAPPSPSLTLPPP
        L V   IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF      P           PLPP+ P PP        P
Subjt:  LHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTP-----------PLPPSIPAPPSPSLTLPPP

Query:  PLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGN-KRSRCETIVGPGIDKDVAHEAVGVKPSP--------LVPKEI-----PMIKKNPV
        PLP        ++SS ESE ESS+EE   +     ++K  +L N +  R +T+    + K    + +   PSP        L+P ++     P+  K   
Subjt:  PLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGN-KRSRCETIVGPGIDKDVAHEAVGVKPSP--------LVPKEI-----PMIKKNPV

Query:  FQIKI-VPKVIHDGKDDTINNE----------------------------LEEPEKEEPDLKP--YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVL
        F I   VP  ++   +   NNE                            + E  KE+ D  P  + +  +LE+G++  EE+ +L +F++Y  G P   +
Subjt:  FQIKI-VPKVIHDGKDDTINNE----------------------------LEEPEKEEPDLKP--YATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVL

Query:  YIKNLAKDVVNDDLYYIFG
        Y+KNLA+ V   DL +IFG
Subjt:  YIKNLAKDVVNDDLYYIFG

Q8RWV8 U11/U12 small nuclear ribonucleoprotein 65 kDa protein4.8e-7258.78Show/hide
Query:  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRPHVTNMSS
        EPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP + P                  +  + + SS
Subjt:  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRPHVTNMSS

Query:  DESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKNP-VFQIKIVPKVIHDGKDDTINNE--LEEPE
         ESEMES E+             T+K G KR+R   +VG G+DKDV HE VGVKPS L PKEIP I+KN  V QIKI  KV  D   +   NE   +EP+
Subjt:  DESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKNP-VFQIKIVPKVIHDGKDDTINNE--LEEPE

Query:  KEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        +++ +LKP+A+LE+LE+G+LPP++ILSLPMFKNYTAG+P+ VLYIKNLAKDVV DD YYIFG
Subjt:  KEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG

Q96LT9 RNA-binding region-containing protein 34.2e-2031.61Show/hide
Query:  DHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPP
        D   +D  E      L V   IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP
Subjt:  DHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPSIPAPP

Query:  SPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGN-KRSRCETIVGPGIDKD------------VAHEAVG--VKPSPLVPK
        +       PPLP         +SS+ESE ES+++E   +     ++K  +L N +  R +TI    + K              +H ++   + PS +  +
Subjt:  SPSLTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGN-KRSRCETIVGPGIDKD------------VAHEAVG--VKPSPLVPK

Query:  EIPMIKKNPVFQIKI-VPKVI--------------HDGKDDTI--------------NNELEEPEKEEPDLKPYATL--EDLERGKLPPEEILSLPMFKN
          P+  K   F I   +P                 HD     +              N ++ E  KE+ D  P   +   +LE+G++  EE+ +L +F++
Subjt:  EIPMIKKNPVFQIKI-VPKVI--------------HDGKDDTI--------------NNELEEPEKEEPDLKPYATL--EDLERGKLPPEEILSLPMFKN

Query:  YTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        Y  G P   +Y+KNLAK V   DL YIFG
Subjt:  YTAGSPTSVLYIKNLAKDVVNDDLYYIFG

Arabidopsis top hitse value%identityAlignment
AT1G09230.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-7358.78Show/hide
Query:  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRPHVTNMSS
        EPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP + P                  +  + + SS
Subjt:  EPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPPPLPTTPRPHVTNMSS

Query:  DESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKNP-VFQIKIVPKVIHDGKDDTINNE--LEEPE
         ESEMES E+             T+K G KR+R   +VG G+DKDV HE VGVKPS L PKEIP I+KN  V QIKI  KV  D   +   NE   +EP+
Subjt:  DESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKNP-VFQIKIVPKVIHDGKDDTINNE--LEEPE

Query:  KEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG
        +++ +LKP+A+LE+LE+G+LPP++ILSLPMFKNYTAG+P+ VLYIKNLAKDVV DD YYIFG
Subjt:  KEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTGCTTCTACCAAACATGGCATGGCTAAGGACCATATGAGCAAAGATCATACTGAGGGTATGAGAGCGAGGCCTCTGCATGTTACTGAGCCAATTGCTGCAAG
GCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCCTATCCTCCTCCAGATGGTAATATCCTGACCAACATTGTAAATGCCCTCATAGCTGTCCCTCGCTTTT
ATACACAGGTGTTGCACTTAATGAACAAGATGAACATTCCAGCTCCATTCCGATTGCCTCTACCCACTCCGCCTCTCCCACCTTCCATTCCTGCACCACCATCACCATCA
CTAACGTTGCCACCACCTCCTCTTCCTACCACTCCAAGGCCCCACGTGACAAATATGTCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGAAGTGGAAGGAAAATA
TCATTCAAGTGGAGTCTCAAAAACTGCAAAATTAGGAAACAAGCGTTCTAGGTGTGAAACAATTGTAGGCCCCGGTATAGACAAAGATGTGGCTCATGAGGCTGTTGGGG
TGAAACCTTCCCCATTGGTCCCAAAAGAGATTCCGATGATAAAAAAGAACCCAGTGTTTCAGATTAAAATTGTTCCTAAAGTGATTCACGATGGAAAGGATGATACTATT
AATAATGAGCTAGAAGAGCCAGAGAAAGAAGAACCAGATCTTAAACCCTATGCAACACTTGAAGATTTAGAGAGAGGAAAATTGCCTCCAGAAGAAATTCTATCACTTCC
AATGTTCAAGAACTATACTGCTGGGAGTCCTACTTCGGTGTTGTATATTAAGAACCTAGCAAAAGATGTAGTGAATGATGACCTCTACTACATATTCGGT
mRNA sequenceShow/hide mRNA sequence
TGGCTAAGGAATCGGGTGTTCATAATAAAATAGTGTCTTTGATTTATTTTACCCTCAACGGTAAGATCCTTGAATTTTTGTTTAACATATTTACCTTTCCAAAAAAAAAA
AAAATTATCTTCTCCTTTTCCTTCCTGGGTGCCTTTGCCGCACCCCTACCTCAAGATTTTGTTCCAGCCGCCCCAGCCTCCTCCTCCGGCGCGGCGTCCCTCCACAAACA
ACTCGACGGCGGCGCGACTTCACCCAGCAGCAGTTGCTTCGTGTTTTTCTGGCTTAGATCAGGCGGATCTCCGGCAAGCCACGGCGACAACTCCTCGCAAGTTGAGCCCC
GACACCCAGGTCTGATATTCGGCGGTGAAATTCGCGGCGATCTCTCCCTCTCCGGCGAGCTACGACGTGTCAGCGAGCTCCACGTGTGGCGGTCTTCGAGCAGCGTCGGT
GGCGGCTCTTCCTCAACGAACGGCGGCGACTTTCTTCCCCTGCAGCAGCCTCGGCGACAGCTGGTTTCCGGCGACTTCTCAGCAGCCGCGGCTAGCACACGAATCAAAGC
TCCGGCGACTCGTTTTTGCAATCCCGACGCGAACAGTAGCAAATTCGCGAAGATTACTTCGTTCTGGCGACTTTCGGCATTGACCCATCCCTATACAGACCCAAATTTAT
GTTACCCACCCCCTCCCGGCGTCGGGCCAACAAGTCCGAAGCCTTTTGAACTCGGATGTGGAAGCCTGAACCCCTTCGACGTTGACCCACTCTTAACCCAAGTGGTTTCG
GCGTCAGTGAGCTGAGGCTTCTTGATAAAGTTTTAGCGGAGGAAAGGGCTATTAGACCAATTTACTGTTATAAATTTAAACAGACAATATCCAATTAAAGGAAGGATTTT
ATTTTATCCTCATCTTTCCGGATGGATGGTGCTTCTACCAAACATGGCATGGCTAAGGACCATATGAGCAAAGATCATACTGAGGGTATGAGAGCGAGGCCTCTGCATGT
TACTGAGCCAATTGCTGCAAGGCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCCTATCCTCCTCCAGATGGTAATATCCTGACCAACATTGTAAATGCCC
TCATAGCTGTCCCTCGCTTTTATACACAGGTGTTGCACTTAATGAACAAGATGAACATTCCAGCTCCATTCCGATTGCCTCTACCCACTCCGCCTCTCCCACCTTCCATT
CCTGCACCACCATCACCATCACTAACGTTGCCACCACCTCCTCTTCCTACCACTCCAAGGCCCCACGTGACAAATATGTCCAGTGATGAGTCAGAAATGGAGTCCTCAGA
AGAGGAAGTGGAAGGAAAATATCATTCAAGTGGAGTCTCAAAAACTGCAAAATTAGGAAACAAGCGTTCTAGGTGTGAAACAATTGTAGGCCCCGGTATAGACAAAGATG
TGGCTCATGAGGCTGTTGGGGTGAAACCTTCCCCATTGGTCCCAAAAGAGATTCCGATGATAAAAAAGAACCCAGTGTTTCAGATTAAAATTGTTCCTAAAGTGATTCAC
GATGGAAAGGATGATACTATTAATAATGAGCTAGAAGAGCCAGAGAAAGAAGAACCAGATCTTAAACCCTATGCAACACTTGAAGATTTAGAGAGAGGAAAATTGCCTCC
AGAAGAAATTCTATCACTTCCAATGTTCAAGAACTATACTGCTGGGAGTCCTACTTCGGTGTTGTATATTAAGAACCTAGCAAAAGATGTAGTGAATGATGACCTCTACT
ACATATTCGGT
Protein sequenceShow/hide protein sequence
MDGASTKHGMAKDHMSKDHTEGMRARPLHVTEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPS
LTLPPPPLPTTPRPHVTNMSSDESEMESSEEEVEGKYHSSGVSKTAKLGNKRSRCETIVGPGIDKDVAHEAVGVKPSPLVPKEIPMIKKNPVFQIKIVPKVIHDGKDDTI
NNELEEPEKEEPDLKPYATLEDLERGKLPPEEILSLPMFKNYTAGSPTSVLYIKNLAKDVVNDDLYYIFG