; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g0990 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g0990
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein SA
Genome locationMC05:11548995..11551522
RNA-Seq ExpressionMC05g0990
SyntenyMC05g0990
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607580.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.49e-14874.69Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA-----PVSSVEWAQEPAASGAADGWDAPVV
        GHKWDVMVDLFFYREPEEAKE+EEEEA  PPD+GIAD+GAAPLVASDQW+ QIPDAQWGA DVVVPAAAA     P SSVEW  EPAA  AADGWDA V 
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA-----PVSSVEWAQEPAASGAADGWDAPVV

Query:  PP-PAPAVDSAAPPA-ASWF
        PP  APAVD AAPP+   W+
Subjt:  PP-PAPAVDSAAPPA-ASWF

XP_022152685.1 40S ribosomal protein SA-like [Momordica charantia]2.95e-15377Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MAT  AP RQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
        GHKWDVMVDLFFYREPEEAKEQEEEEA AP DYGIADFGAAPLVASDQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAP
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP

Query:  AVDSAAPPAASWF
        AV+  APPA+ WF
Subjt:  AVDSAAPPAASWF

XP_022155491.1 40S ribosomal protein SA-like [Momordica charantia]5.55e-17584.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
        GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP

Query:  AVDSAAPPAASWF
        AVDSAAPPAASWF
Subjt:  AVDSAAPPAASWF

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]1.01e-14874.92Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP
        GHKWDVMVDLFFYREPEEAKE+EEEEA  PPD+GIAD+GAAPLVASDQW+ QIPDAQWGA DVVVPAAAA    P SSVEW  EPAA  AADGWDA V P
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP

Query:  P-PAPAVDSAAPPA-ASWF
        P  APAVD AAPP+   W+
Subjt:  P-PAPAVDSAAPPA-ASWF

XP_022972886.1 40S ribosomal protein SA-like [Cucurbita maxima]2.11e-14874.69Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP
        GHKWDVMVDLFFYREPEEAKE+EEEEA  PPD+GIAD+GAAPLVASDQW+ QIPDAQWGA DVVVPAA A    P SSVEW  EPAA  AADGWDA V P
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP

Query:  P-PAPAVDSAAPPAAS--WF
        P  APAVD AAPP+A+  W+
Subjt:  P-PAPAVDSAAPPAAS--WF

TrEMBL top hitse value%identityAlignment
A0A6J1DEM6 40S ribosomal protein SA1.43e-15377Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MAT  AP RQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
        GHKWDVMVDLFFYREPEEAKEQEEEEA AP DYGIADFGAAPLVASDQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAP
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP

Query:  AVDSAAPPAASWF
        AV+  APPA+ WF
Subjt:  AVDSAAPPAASWF

A0A6J1DWT5 40S ribosomal protein SA2.69e-17584.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
        GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAP

Query:  AVDSAAPPAASWF
        AVDSAAPPAASWF
Subjt:  AVDSAAPPAASWF

A0A6J1F0N2 40S ribosomal protein SA4.90e-14974.92Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP
        GHKWDVMVDLFFYREPEEAKE+EEEEA  PPD+GIAD+GAAPLVASDQW+ QIPDAQWGA DVVVPAAAA    P SSVEW  EPAA  AADGWDA V P
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP

Query:  P-PAPAVDSAAPPA-ASWF
        P  APAVD AAPP+   W+
Subjt:  P-PAPAVDSAAPPA-ASWF

A0A6J1I769 40S ribosomal protein SA1.02e-14874.69Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L L        R +V I+      + S   Y    +  F 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFN

Query:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
         Y  A    GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA
Subjt:  CYITAX---GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA

Query:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP
        GHKWDVMVDLFFYREPEEAKE+EEEEA  PPD+GIAD+GAAPLVASDQW+ QIPDAQWGA DVVVPAA A    P SSVEW  EPAA  AADGWDA V P
Subjt:  GHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVP

Query:  P-PAPAVDSAAPPAAS--WF
        P  APAVD AAPP+A+  W+
Subjt:  P-PAPAVDSAAPPAAS--WF

A0A6J1K9M4 40S ribosomal protein SA5.08e-14573.95Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYL---LLFFLLPKRNVVLIKGLVSTELYNMNILDYFNCY
        MATG AP RQLSQKEADIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L      L +   ++  +   +N+++       +   +    +   +
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYL-----PLYL---LLFFLLPKRNVVLIKGLVSTELYNMNILDYFNCY

Query:  ITAXGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
          A GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
Subjt:  ITAXGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVPPPAPA
        VMVDLFFYREPEEAKE+EEE A APPDYGIAD+GAAPLVASDQWAGQI DAQWG PDVV P  AA    PVSSVEWAQEP A  A+DGWD   VPPPAP 
Subjt:  VMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAA----PVSSVEWAQEPAASGAADGWDAPVVPPPAPA

Query:  VDSAAPPAASW
         + AAPPAASW
Subjt:  VDSAAPPAASW

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA1.4e-9063.67Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA---X
        A P R LSQKE DIQMMLAAEVHLGTKN +FQMERY+FKRRNDG++ I L         L  R +V I+      + S   Y    +  F  Y  A    
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA---X

Query:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        GRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVD
Subjt:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

Query:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPL--VASDQWAGQIPDA-QWGAP-DVVVPAAAAPVSS-VEWAQEPAASG-AADGWDAPVVPPPA--PA
        LFFYREPEE KEQE +E  A PDYGI D+ A  L  +    W   I DA QWGA    V P  A P S+  + A  P+A   A DGWDA   PP A  P 
Subjt:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPL--VASDQWAGQIPDA-QWGAP-DVVVPAAAAPVSS-VEWAQEPAASG-AADGWDAPVVPPPA--PA

Query:  VDSAAPPAASW
        V    PP A W
Subjt:  VDSAAPPAASW

O22518 40S ribosomal protein SA2.8e-9164.8Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA---X
        AAPPRQLSQKEADIQMMLAA+VHLGTKN DFQMERYIFKRRNDG++ I L         L  R +V I+      + S   Y    +  F  Y  A    
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA---X

Query:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        GRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVD
Subjt:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

Query:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADG-WDAPVVPP-----PAPAVD
        LFFYREPEEAK+QEEEEA A  DY I DF A  + A  QW G I D  W      VP     V  V W     A  AA G W   V PP     P   +D
Subjt:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADG-WDAPVVPP-----PAPAVD

Query:  SAAP
        +  P
Subjt:  SAAP

O65751 40S ribosomal protein SA5.8e-8960.97Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSI-------YLPLYLLLFFLLPKRNVVLIKGLVSTELYNMNILDYFNCYI
        MAT  AP RQL+QKEADIQMMLAA+VHLGTKN +FQMERYIFKRRNDG++ I        L L   +   +     ++++   S   Y    +  F  Y 
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSI-------YLPLYLLLFFLLPKRNVVLIKGLVSTELYNMNILDYFNCYI

Query:  TA---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHK
         A    GRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G K
Subjt:  TA---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHK

Query:  WDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPP-PAPAV
        WDVMVDLFFYREPEEAK+ EE+E AA PDY IADF  + + +  QW   I D  W   +  VP     V +V WA   A +G    W   V PP   P  
Subjt:  WDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPP-PAPAV

Query:  DSAAPPAASW
           + PA  W
Subjt:  DSAAPPAASW

O80377 40S ribosomal protein SA1.1e-9063.84Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA
        MA+GA   R+LS  EADIQMM AAEVHLGTKN DFQMERY+FKRRNDG++ I L        +L  R +V I+      + S   Y    +  F  Y  A
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYITA

Query:  ---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
            GRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+
Subjt:  ---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPAVDSA
        VMVDLFFYREPEE K+QEEE+     DY +AD+ AAP+  +DQW   IPDAQWG  DVV PA +A V +  W    A   A DGWDA   PP   AV   
Subjt:  VMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPAVDSA

Query:  APPAASW
         P    W
Subjt:  APPAASW

Q08682 40S ribosomal protein Sa-15.6e-8460.07Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT
        MAT G+A   QLSQKEAD++MM AAEVHLGTKN ++QMERY+FKRRNDG++   L         +  R +V I+      + S   Y    +  F  Y  
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT

Query:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW
        A    GRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KW
Subjt:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW

Query:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA
        DVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QIPDA W   +   P +AAP ++  W+ + AA+ A  GW+A   P  APA
Subjt:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA4.0e-8560.07Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT
        MAT G+A   QLSQKEAD++MM AAEVHLGTKN ++QMERY+FKRRNDG++   L         +  R +V I+      + S   Y    +  F  Y  
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT

Query:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW
        A    GRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KW
Subjt:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW

Query:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA
        DVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QIPDA W   +   P +AAP ++  W+ + AA+ A  GW+A   P  APA
Subjt:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA

AT1G72370.2 40s ribosomal protein SA4.4e-8459.4Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT
        MAT G+A   QLSQKEAD++MM AAEVHLGTKN ++QMERY+FKRRNDG++   L         +  R +V I+      + S   Y    +  F  Y  
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYIT

Query:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW
        A    GRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KW
Subjt:  A---XGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKW

Query:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA
        DVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QIPDA W   +   P +AAP ++  W     +  A  GW+A   P  APA
Subjt:  DVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPA

AT3G04770.1 40s ribosomal protein SA B1.9e-6666Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYI---TAX
        A   RQ+S+KEADIQMML+A+VHLGTKN ++QMERY+FKRR+DG++ I L         +  R +V I+      + S   Y    +  F  Y       
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYI---TAX

Query:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        GRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B1.6e-8160.56Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYI---TAX
        A   RQ+S+KEADIQMML+A+VHLGTKN ++QMERY+FKRR+DG++ I L         +  R +V I+      + S   Y    +  F  Y       
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKG-----LVSTELYNMNILDYFNCYI---TAX

Query:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        GRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVD
Subjt:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

Query:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQE-PAASGAADGWD
        LFFYREPEEAK++ +EEA    DYG        +V  DQW   QI DA W   +V  P +AAP   V  A    AAS  A GW+
Subjt:  LFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVASDQW-AGQIPDAQWGAPDVVVPAAAAPVSSVEWAQE-PAASGAADGWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAGCTGCACCGCCGCGCCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTTGGCACAAAAAACTCAGATTTCCAAAT
GGAACGATACATTTTCAAGCGCCGGAATGATGGTTTGTTTTCAATCTACTTGCCTCTGTATCTTCTCCTCTTTTTTCTGTTGCCTAAGAGGAATGTTGTGCTTATTAAAG
GCTTAGTGAGCACTGAGCTCTACAATATGAACATATTAGATTATTTCAATTGTTATATTACAGCCATNGGGAGGCACACTCCTGGAACGTTCACCAACCAGCTTCAGACC
TCATTCAATGAACCGCGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAGGCTGCCCTTGGGAACATTCCTACGATTGCCTTTTGTGACACCGA
CTCCCCAATGCGATATGTTGATATTGGAATTCCGGCTAACAACAAGGGGAAACACAGCATAGGATGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAA
CAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTGCTGCGCCCCCGGATTAT
GGCATTGCAGACTTTGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCTGGACAAATTCCTGATGCTCAGTGGGGTGCCCCAGATGTGGTTGTGCCTGCTGCTGCTGC
ACCTGTTTCTAGTGTCGAGTGGGCGCAAGAGCCAGCTGCTTCGGGGGCGGCAGATGGATGGGATGCTCCAGTAGTACCACCACCAGCACCTGCTGTTGACAGTGCAGCAC
CGCCCGCCGCGAGTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAGCTGCACCGCCGCGCCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTTGGCACAAAAAACTCAGATTTCCAAAT
GGAACGATACATTTTCAAGCGCCGGAATGATGGTTTGTTTTCAATCTACTTGCCTCTGTATCTTCTCCTCTTTTTTCTGTTGCCTAAGAGGAATGTTGTGCTTATTAAAG
GCTTAGTGAGCACTGAGCTCTACAATATGAACATATTAGATTATTTCAATTGTTATATTACAGCCATNGGGAGGCACACTCCTGGAACGTTCACCAACCAGCTTCAGACC
TCATTCAATGAACCGCGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAGGCTGCCCTTGGGAACATTCCTACGATTGCCTTTTGTGACACCGA
CTCCCCAATGCGATATGTTGATATTGGAATTCCGGCTAACAACAAGGGGAAACACAGCATAGGATGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAA
CAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTGCTGCGCCCCCGGATTAT
GGCATTGCAGACTTTGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCTGGACAAATTCCTGATGCTCAGTGGGGTGCCCCAGATGTGGTTGTGCCTGCTGCTGCTGC
ACCTGTTTCTAGTGTCGAGTGGGCGCAAGAGCCAGCTGCTTCGGGGGCGGCAGATGGATGGGATGCTCCAGTAGTACCACCACCAGCACCTGCTGTTGACAGTGCAGCAC
CGCCCGCCGCGAGTTGGTTTTGAGAGAAAGGATCCTTACGAATCTGTACTCGAATGGATTAATTATTGTGAGTTTGCTTGTTTATTTAGGAATGCCATCCTTCTTTTTTG
GTTGGAAAGATCCGACTCTCAGGTACCTTTTTTTCTTAGTCCAGTTTTAAATTTTGAAATTGATTTTTTCGACTTCATTAGAAGTGTATACCATCGGTATCACGGTAGAA
TTATTTTTGGAATATATGAGAAACTACGTAGCTAAGTATAATAGACATACATTCATACAAATAAGATATATTAGTTTTGGTGGTAG
Protein sequenceShow/hide protein sequence
MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGLFSIYLPLYLLLFFLLPKRNVVLIKGLVSTELYNMNILDYFNCYITAXGRHTPGTFTNQLQT
SFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDY
GIADFGAAPLVASDQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPAVDSAAPPAASWF