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MC05g1004 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1004
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box domain-containing protein
Genome locationMC05:12587908..12588252
RNA-Seq ExpressionMC05g1004
SyntenyMC05g1004
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4319460.1 unnamed protein product [Prunus armeniaca]5.27e-2045.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR +++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

PQQ00633.1 F-box/kelch-repeat protein [Prunus yedoensis var. nudiflora]1.33e-2045.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR  ++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K  
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

VVA31268.1 PREDICTED: F-box/kelch-repeat [Prunus dulcis]3.47e-1944.26Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ +P D+ME I   LN  + IR  ++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

XP_021818908.1 uncharacterized protein LOC110760869 [Prunus avium]1.50e-2045.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR +++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

XP_022155350.1 uncharacterized protein LOC111022492 [Momordica charantia]1.97e-76100Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF
        WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF

Query:  NPISGAKCILSSLPT
        NPISGAKCILSSLPT
Subjt:  NPISGAKCILSSLPT

TrEMBL top hitse value%identityAlignment
A0A314Y2Z7 F-box/kelch-repeat protein6.44e-2145.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR  ++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K  
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

A0A5E4FUV8 PREDICTED: F-box/kelch-repeat1.68e-1944.26Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ +P D+ME I   LN  + IR  ++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

A0A6J1DM79 uncharacterized protein LOC1110224929.53e-77100Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF
        WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLF

Query:  NPISGAKCILSSLPT
        NPISGAKCILSSLPT
Subjt:  NPISGAKCILSSLPT

A0A6J5Y010 F-box domain-containing protein2.55e-2045.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR +++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

A0A6P5SZ44 uncharacterized protein LOC1107608697.25e-2145.08Show/hide
Query:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV
        W+ LP D+ME I   LN  + IR +++CKSW SL ++ D    PQ PWLLLP  S+K+ +   SVS+ KFHT  +     G  V GCSKGW++    K +
Subjt:  WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILR-PQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDG---GNNVVGCSKGWVIF---KTV

Query:  GSKISLFNPISGAKCILSSLPT
         SK+ L NPIS  +  L SL T
Subjt:  GSKISLFNPISGAKCILSSLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAAAAACTTGCCTGGAGATCTTATGGAGAAAATTGCTTTGAAACTTAATTCAACTGATTATATTCGTAACTCCATGGTTTGCAAATCATGGCAATCACTTCTTTTGCA
ATCTGATATTCTTAGGCCTCAATTTCCGTGGCTTTTGCTTCCTCACCACTCAAGTAAACACACCATAAAACTCTACAGTGTTTCGGAAAACAAATTTCACACATTCCATG
TTGATGGGGGAAATAATGTTGTTGGTTGCTCCAAGGGTTGGGTTATTTTTAAGACGGTTGGATCGAAGATATCTCTTTTTAACCCTATTTCTGGTGCTAAATGCATCCTT
TCGTCCCTACCGACC
mRNA sequenceShow/hide mRNA sequence
TGGAAAAACTTGCCTGGAGATCTTATGGAGAAAATTGCTTTGAAACTTAATTCAACTGATTATATTCGTAACTCCATGGTTTGCAAATCATGGCAATCACTTCTTTTGCA
ATCTGATATTCTTAGGCCTCAATTTCCGTGGCTTTTGCTTCCTCACCACTCAAGTAAACACACCATAAAACTCTACAGTGTTTCGGAAAACAAATTTCACACATTCCATG
TTGATGGGGGAAATAATGTTGTTGGTTGCTCCAAGGGTTGGGTTATTTTTAAGACGGTTGGATCGAAGATATCTCTTTTTAACCCTATTTCTGGTGCTAAATGCATCCTT
TCGTCCCTACCGACC
Protein sequenceShow/hide protein sequence
WKNLPGDLMEKIALKLNSTDYIRNSMVCKSWQSLLLQSDILRPQFPWLLLPHHSSKHTIKLYSVSENKFHTFHVDGGNNVVGCSKGWVIFKTVGSKISLFNPISGAKCIL
SSLPT