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MC05g1027 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1027
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description3'-5' exonuclease domain-containing protein
Genome locationMC05:13870123..13870272
RNA-Seq ExpressionMC05g1027
SyntenyMC05g1027
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY48626.1 hypothetical protein CUMW_113130 [Citrus unshiu]7.79e-1260.42Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
        PQSL+DFL+++ F FVG GIE DA KLY DYGL+VA T+D+ D+A  +
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
KAE8651170.1 hypothetical protein Csa_000755 [Cucumis sativus]2.58e-1469.39Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        PQSLIDFL+D++F FVGVGI+ D  KLYNDY L+VANTVDL +LA  E+
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
XP_004136771.1 Werner Syndrome-like exonuclease [Cucumis sativus]1.99e-1469.39Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        PQSLIDFL+D++F FVGVGI+ D  KLYNDY L+VANTVDL +LA  E+
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
XP_006470937.1 Werner Syndrome-like exonuclease [Citrus sinensis]7.79e-1260.42Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
        PQSL+DFL+++ F FVG GIE DA KLY DYGL+VA T+D+ D+A  +
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
XP_038906336.1 Werner Syndrome-like exonuclease [Benincasa hispida]1.99e-1466Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        IP+SLIDFL+D++F FVGVGI++D ++LYNDY L VANTVDL +LA  E+
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
TrEMBL top hitse value%identityAlignment
A0A0A0LHC5 3'-5' exonuclease domain-containing protein9.62e-1569.39Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        PQSLIDFL+D++F FVGVGI+ D  KLYNDY L+VANTVDL +LA  E+
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
A0A2H5P8D6 3'-5' exonuclease domain-containing protein3.77e-1260.42Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
        PQSL+DFL+++ F FVG GIE DA KLY DYGL+VA T+D+ D+A  +
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
A0A5B7BMQ8 Putative Werner Syndrome-like exonuclease4.54e-1570Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        IPQSL DFL D  + FVGVGI++D +KLY+DYGLDV+NTVDLG LA +EL
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
A0A6J1D107 Werner Syndrome-like exonuclease9.37e-1271.74Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
        IP+SL DFL DESF FVGVGI ED  KL  DYGL+V+NTVDL +LA
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
V4SAI7 3'-5' exonuclease domain-containing protein1.42e-1160.42Show/hide
Query:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
        PQSL+DFL ++ F FVG GIE DA KLY DYGL+VA T+D+ D+A  +
Subjt:  PQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTE
SwissProt top hitse value%identityAlignment
Q84LH3 Werner Syndrome-like exonuclease1.5e-0542Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        IPQSL   ++D +   VG+GI+ D+ KL++DYG+ + +  DL DLA  ++
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
Q8VEG4 Exonuclease 3'-5' domain-containing protein 22.8e-0450Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
        +P++L+D L D +   VGVG  EDA KL  DYGL V   +DL  LA
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
Q9NVH0 Exonuclease 3'-5' domain-containing protein 23.6e-0450Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
        +P++L+D L D +   VGVG  EDA KL  DYGL V   +DL  LA
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLA
Q9VGN7 Exonuclease 3'-5' domain-containing protein 24.3e-0554.76Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDL
        IPQ L + L+D+S   VGV  +EDA KL +DYG+ VA+T+DL
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDL
Arabidopsis top hitse value%identityAlignment
AT4G13870.1 Werner syndrome-like exonuclease1.1e-0642Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        IPQSL   ++D +   VG+GI+ D+ KL++DYG+ + +  DL DLA  ++
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
AT4G13870.2 Werner syndrome-like exonuclease1.1e-0642Show/hide
Query:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL
        IPQSL   ++D +   VG+GI+ D+ KL++DYG+ + +  DL DLA  ++
Subjt:  IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCCCTCAGTCCTTGATCGATTTCCTCGACGACGAGTCATTCGCCTTTGTCGGCGTCGGAATCGAGGAGGACGCTCGGAAGCTGTACAACGACTACGGACTGGATGTGGC
GAACACCGTGGATCTTGGGGATCTGGCTACGACGGAGCTG
mRNA sequenceShow/hide mRNA sequence
ATCCCTCAGTCCTTGATCGATTTCCTCGACGACGAGTCATTCGCCTTTGTCGGCGTCGGAATCGAGGAGGACGCTCGGAAGCTGTACAACGACTACGGACTGGATGTGGC
GAACACCGTGGATCTTGGGGATCTGGCTACGACGGAGCTG
Protein sequenceShow/hide protein sequence
IPQSLIDFLDDESFAFVGVGIEEDARKLYNDYGLDVANTVDLGDLATTEL