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MC05g1031 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1031
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S12
Genome locationMC05:13954381..13954504
RNA-Seq ExpressionMC05g1031
SyntenyMC05g1031
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006032 - Ribosomal protein S12/S23
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QMQ98106.1 ribosomal protein S12 [Solanum anguivi]3.60e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

YP_006666121.1 ribosomal protein S12 [Malus domestica]3.68e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

YP_009295080.1 ribosomal protein S12 [Ipomoea nil]3.68e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

YP_009430445.1 ribosomal protein S12 [Solanum lycopersicum]3.52e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

YP_009694648.1 ribosomal protein S12 [Prunus avium]9.17e-1278.05Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+NQ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

TrEMBL top hitse value%identityAlignment
A0A290WL09 30S ribosomal protein S12, chloroplastic1.70e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

A0A2H4PTU6 30S ribosomal protein S12, chloroplastic1.70e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

A0A5C1J055 Ribosomal protein S124.44e-1278.05Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+NQ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

A0A7S9DG19 Ribosomal protein S121.70e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

A0A7S9DH11 Ribosomal protein S121.70e-1175.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

SwissProt top hitse value%identityAlignment
P50892 Ribosomal protein S12, mitochondrial1.4e-0973.17Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHN Q
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

P60096 Ribosomal protein S12, mitochondrial5.1e-0970.73Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P V TRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHN Q
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

P68535 Ribosomal protein S12, mitochondrial2.7e-1075.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

P68536 Ribosomal protein S12, mitochondrial2.7e-1075.61Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHNLQ
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

Q95869 Ribosomal protein S12, mitochondrial1.4e-0973.17Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHN Q
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein9.6e-1173.17Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHN Q
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

ATCG00065.1 ribosomal protein S12A3.0e-0456.41Show/hide
Query:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        V T TPKKPN A R++A+V+L +  +I A+IP  GHNLQ
Subjt:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

ATCG00905.1 ribosomal protein S12C3.0e-0456.41Show/hide
Query:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        V T TPKKPN A R++A+V+L +  +I A+IP  GHNLQ
Subjt:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

ATCG01230.1 ribosomal protein S12B3.0e-0456.41Show/hide
Query:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        V T TPKKPN A R++A+V+L +  +I A+IP  GHNLQ
Subjt:  VSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ

ATMG00980.1 Ribosomal protein S12/S23 family protein9.6e-1173.17Show/hide
Query:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ
        P VSTRTPKKPN APR+IAKV+L+N+ DI+AHIP +GHN Q
Subjt:  PHVSTRTPKKPNLAPRRIAKVQLNNQ-DIYAHIPNKGHNLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACATGTTTCAACGAGAACACCGAAAAAACCTAATTTAGCTCCACGTAGGATAGCGAAAGTACAGTTGAACAATCAAGATATATATGCTCACATTCCAAACAAAGGTCA
TAATTTACAA
mRNA sequenceShow/hide mRNA sequence
CCACATGTTTCAACGAGAACACCGAAAAAACCTAATTTAGCTCCACGTAGGATAGCGAAAGTACAGTTGAACAATCAAGATATATATGCTCACATTCCAAACAAAGGTCA
TAATTTACAA
Protein sequenceShow/hide protein sequence
PHVSTRTPKKPNLAPRRIAKVQLNNQDIYAHIPNKGHNLQ