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MC05g1143 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1143
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGrowth-regulating factor
Genome locationMC05:15555870..15556454
RNA-Seq ExpressionMC05g1143
SyntenyMC05g1143
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0032502 - developmental process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014977 - WRC domain
IPR031137 - Growth-regulating factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25390.1 WRC domain-containing protein [Cucumis melo var. makuwa]3.70e-5957.8Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER ++ D  D+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS  AA PK      K++  P P   P+S           K+ +KLGVVKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

XP_008443039.1 PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]2.80e-5857.8Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER ++ D  D+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS  AA PK      K++  P P   P+S           K+ +KLGVVKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

XP_022151363.1 uncharacterized protein LOC111019324 isoform X1 [Momordica charantia]2.55e-132100Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV

XP_022151364.1 uncharacterized protein LOC111019324 isoform X2 [Momordica charantia]2.47e-132100Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV

XP_038903168.1 uncharacterized protein LOC120089834 [Benincasa hispida]4.87e-6057.27Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPT-ELDDNKEE-------ITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALM
        G+WCEREKAFPLKKRRGSFER   + DDN E+       + T ++ +++ ++     TKMNKK   +S    QKQ    +K+G  L + GKKRSRGGALM
Subjt:  GKWCEREKAFPLKKRRGSFERPT-ELDDNKEE-------ITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALM

Query:  EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA----PKK------------EQPLPPPP---LTPASKKRSVKLGVVKARSISS
        EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA    PK               P P PP   LT ASKKR +KLGVVKARSISS
Subjt:  EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA----PKK------------EQPLPPPP---LTPASKKRSVKLGVVKARSISS

Query:  LLGQTDNVMAAPLYPLP-----HDDDV
        LLGQ D ++A P  P P     HDD++
Subjt:  LLGQTDNVMAAPLYPLP-----HDDDV

TrEMBL top hitse value%identityAlignment
A0A1S3B760 Growth-regulating factor1.40e-5857.8Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER ++ D  D+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS  AA PK      K++  P P   P+S           K+ +KLGVVKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A1S3B7U9 Growth-regulating factor1.36e-5857.8Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER ++ D  D+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS  AA PK      K++  P P   P+S           K+ +KLGVVKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A5D3DQ51 Growth-regulating factor1.79e-5957.8Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER ++ D  D+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPTELD--DNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS  AA PK      K++  P P   P+S           K+ +KLGVVKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRS--AAAPK------KEQPLPPPPLTPAS----------KKRSVKLGVVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A6J1DBZ7 Growth-regulating factor1.24e-132100Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV

A0A6J1DCV6 Growth-regulating factor1.19e-132100Show/hide
Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42040.1 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).3.6e-2651.82Show/hide
Query:  KNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAP
        + N K   + K+    +    + +E EE+  G      GKK+++  GG L EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGR+RS+N    +S    
Subjt:  KNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAP

Query:  KKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQT
          E+      +    KK+ VKLG+VKARSISSLLGQT
Subjt:  KKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQT

AT5G53660.1 growth-regulating factor 73.8e-0442.11Show/hide
Query:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS
        +E  RC R +G+ WRC ++ +  +  CE HL +GR RS
Subjt:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTC
GCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGG
TGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAG
ACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCCGCGCCCAAGAAGGAGCAGCCCCT
CCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTGTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGG
CGCCGCTGTATCCGCTGCCTCATGACGACGACGTA
mRNA sequenceShow/hide mRNA sequence
GGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTC
GCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGG
TGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAG
ACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCCGCGCCCAAGAAGGAGCAGCCCCT
CCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTGTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGG
CGCCGCTGTATCCGCTGCCTCATGACGACGACGTA
Protein sequenceShow/hide protein sequence
GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQ
TLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGVVKARSISSLLGQTDNVMAAPLYPLPHDDDV