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MC05g1152 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1152
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationMC05:15655254..15655391
RNA-Seq ExpressionMC05g1152
SyntenyMC05g1152
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006032 - Ribosomal protein S12/S23
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAV84619.1 ribosomal protein S12, partial [Abies lasiocarpa]2.35e-1989.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
APC92870.1 ribosomal protein S12, partial [Abies mariesii]5.46e-2089.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH+VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
KAF3583699.1 hypothetical protein F2Q69_00032188, partial [Brassica cretica]3.45e-2091.3Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEHYVVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
KAF5809815.1 putative ribosomal protein S12/S23 [Helianthus annuus]2.06e-1989.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HN QEHYVVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
QSQ72458.1 ribosomal protein S12 [Vicia costata]2.15e-1991.3Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
TrEMBL top hitse value%identityAlignment
A0A1J0KFC9 Ribosomal protein S12 (Fragment)2.64e-2089.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH+VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
A0A1J0KGY8 Ribosomal protein S12 (Fragment)1.53e-1989.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
A0A1J0KIW8 Ribosomal protein S12 (Fragment)1.53e-1989.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
A0A251VT10 Putative ribosomal protein S12/S239.99e-2089.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HN QEHYVVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
Q14EZ1 Ribosomal protein S12 (Fragment)1.14e-1989.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GIDHNLQEH VVLVRGGRVKDLP VRYHIVRGTLD  GV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
SwissProt top hitse value%identityAlignment
A4QJD9 30S ribosomal protein S12, chloroplastic1.1e-1589.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
A4QJV5 30S ribosomal protein S12-A, chloroplastic1.1e-1589.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
A4QJX7 30S ribosomal protein S12-B, chloroplastic1.1e-1589.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
P42344 30S ribosomal protein S12, chloroplastic5.0e-1689.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        E+TAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLDVVGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
Q3V510 30S ribosomal protein S12, chloroplastic1.1e-1589.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein1.3e-0854.35Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        +I A+I G  HN QEH  VL+RGGRVKD P V+ H +RG  D++G+
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
ATCG00065.1 ribosomal protein S12A7.9e-1789.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
ATCG00905.1 ribosomal protein S12C7.9e-1789.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
ATCG01230.1 ribosomal protein S12B7.9e-1789.13Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        EITAYI GI HNLQEH VVLVRGGRVKDLP VRYHIVRGTLD VGV
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
ATMG00980.1 Ribosomal protein S12/S23 family protein1.3e-0854.35Show/hide
Query:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV
        +I A+I G  HN QEH  VL+RGGRVKD P V+ H +RG  D++G+
Subjt:  EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATCACTGCTTATATACGTGGTATTGACCATAATTTACAAGAACATTATGTAGTTTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGTTGTGAGATATCACATTGT
TCGAGGAACCCTAGATGTTGTCGGAGTA
mRNA sequenceShow/hide mRNA sequence
GAAATCACTGCTTATATACGTGGTATTGACCATAATTTACAAGAACATTATGTAGTTTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGTTGTGAGATATCACATTGT
TCGAGGAACCCTAGATGTTGTCGGAGTA
Protein sequenceShow/hide protein sequence
EITAYIRGIDHNLQEHYVVLVRGGRVKDLPVVRYHIVRGTLDVVGV