; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g1163 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1163
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL33
Genome locationMC05:15811665..15815136
RNA-Seq ExpressionMC05g1163
SyntenyMC05g1163
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596659.1 Serine/arginine-rich SC35-like splicing factor SCL30A, partial [Cucurbita argyrosperma subsp. sororia]5.08e-12588.57Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSSRGRSY+YRRSPL+YS+SP + RKYSRSPEYYSPA+S RYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRSYSRSYCR
        SRS SRSY R
Subjt:  SRSYSRSYCR

XP_008443002.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL33 [Cucumis melo]2.07e-12690.57Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RSPSPR RGGR RDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVD ADA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY--RRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSR
        QVLLG ELTVVFAEENRKRPEEMRARDSSRGRSY+Y  R SPLRYSRSPHYDRKYSRSPEYYSPA+S RYSRS  PR RRYRE+SY RSPYD RGRSYSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY--RRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSR

Query:  SRSRSYSRSYCR
        SRSRSYSRSY R
Subjt:  SRSRSYSRSYCR

XP_022151394.1 serine/arginine-rich SC35-like splicing factor SCL33 [Momordica charantia]9.02e-14699.52Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRSYSRSYCR
        SRSYSRSYCR
Subjt:  SRSYSRSYCR

XP_022948463.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 [Cucurbita moschata]2.45e-12487.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSS GRSY+YRRSPL+YS+SP + RKYS SPEYYSPA+SGRYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRS--YSRSYCR
        SRS  YSRSY R
Subjt:  SRS--YSRSYCR

XP_022948470.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X3 [Cucurbita moschata]2.12e-12487.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSS GRSY+YRRSPL+YS+SP + RKYS SPEYYSPA+SGRYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRS--YSRSYCR
        SRS  YSRSY R
Subjt:  SRS--YSRSYCR

TrEMBL top hitse value%identityAlignment
A0A1S3B7U0 serine/arginine-rich SC35-like splicing factor SCL331.00e-12690.57Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RSPSPR RGGR RDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVD ADA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY--RRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSR
        QVLLG ELTVVFAEENRKRPEEMRARDSSRGRSY+Y  R SPLRYSRSPHYDRKYSRSPEYYSPA+S RYSRS  PR RRYRE+SY RSPYD RGRSYSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY--RRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSR

Query:  SRSRSYSRSYCR
        SRSRSYSRSY R
Subjt:  SRSRSYSRSYCR

A0A6J1DCY5 serine/arginine-rich SC35-like splicing factor SCL334.36e-14699.52Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRSYSRSYCR
        SRSYSRSYCR
Subjt:  SRSYSRSYCR

A0A6J1G9D2 serine/arginine-rich SC35-like splicing factor SCL33 isoform X21.18e-12487.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSS GRSY+YRRSPL+YS+SP + RKYS SPEYYSPA+SGRYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRS--YSRSYCR
        SRS  YSRSY R
Subjt:  SRS--YSRSYCR

A0A6J1G9Y1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X31.03e-12487.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSS GRSY+YRRSPL+YS+SP + RKYS SPEYYSPA+SGRYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRS--YSRSYCR
        SRS  YSRSY R
Subjt:  SRS--YSRSYCR

A0A6J1G9Y3 serine/arginine-rich SC35-like splicing factor SCL33 isoform X11.46e-12487.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG
        MRGRSYSYSPSPPRSYGRR+RS SPR  GGRGRDLPTSLLVRNL+HDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQ++DP+DA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR
        QVLLGRELTVVFAEENRKRPE+MRARDSS GRSY+YRRSPL+YS+SP + RKYS SPEYYSPA+SGRYSRSISPRDRRYRERSY RSPYDSR R YSRSR
Subjt:  QVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSR

Query:  SRS--YSRSYCR
        SRS  YSRSY R
Subjt:  SRS--YSRSYCR

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 106.4e-2642.5Show/hide
Query:  TSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDS--------
        TSL VRN+  D R EDLR  FGR+GP+ D+Y+P D+Y+  PRGF +VQF D  DA DA + LD + + GR++ + FA+ +RK P +M+A++         
Subjt:  TSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDS--------

Query:  ---------SRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDR-RYRERSYLRSPYDSRGRSYS--------RSRSRSYSRSYCR
                 SR RSY  RRS    SRS  Y+ + S SP    P    R SRS S  DR ++R RS+ RS  +SR RS S        +SRSRS S +  R
Subjt:  ---------SRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDR-RYRERSYLRSPYDSRGRSYS--------RSRSRSYSRSYCR

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL286.4e-3445.11Show/hide
Query:  RGRSYSYSP-----SPPRSY-----GRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADA
        R RS SYSP     SPPR        R    PS RD    G   P+ LL+RNL  D RP DLR  F RFGPLKDIYLPR+YY+GEPRGFGFV++    DA
Subjt:  RGRSYSYSP-----SPPRSY-----GRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADA

Query:  TDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSP-------------EYYSPAQSGR-YSRSISPRDR
         +A   ++ +V+ GRE+ +VFAEENRK P+EMR  + + GR  +Y+R+  R  R  +     SRSP             + YSP +  R  SRS  PR+ 
Subjt:  TDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSP-------------EYYSPAQSGR-YSRSISPRDR

Query:  RYRERSYLRSPYDS------RGRSYSRSRSRSYSR
        R  +    RSP +       R R  SRSRSRS SR
Subjt:  RYRERSYLRSPYDS------RGRSYSRSRSRSYSR

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL301.1e-3044.95Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSP----------RDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPAD
        MR  S  Y   P R YG R RSP P             GGR      SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG+PRGF FV+FVD  D
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSP----------RDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPAD

Query:  ATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYD
        A +A+  ++ +   GRE+TVV A E+RKRPEEMR +  +R R  +  R    + RS       SRSP   S ++S   SRS SP  RR         P  
Subjt:  ATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYD

Query:  SRGRSYSRSRSRSYSRSY
            +YSR   RSYS  Y
Subjt:  SRGRSYSRSRSRSYSRSY

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A1.0e-6065.6Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR--GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYEL
        MRGR  SY+PSPPR YGRR RSPSPR R  G R  DLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGF+QF+DPADA +AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR--GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYEL

Query:  DGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY---RRSPLRYSRSP---HYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSP--Y
        DG +LLGRELTVVFAEENRK+P EMR RD   GRS  +   RRSP RYSRSP      R  SRS  Y SP      SRS+SP+DRRY +ERSY RSP   
Subjt:  DGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY---RRSPLRYSRSP---HYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSP--Y

Query:  DSRGRSYSRSRSRSYSRS
         SR RS S  R +S+SRS
Subjt:  DSRGRSYSRSRSRSYSRS

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL333.2e-6266.51Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD
        MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQF+DPADA DAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S
        G +LLGRELTVVFAEENRK+P EMRAR+   GR  + RR+P RY   SRS  P   R  SRS +YYSP     + RSISPR+ RY   RSY RSP    S
Subjt:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S

Query:  RGRSYS--RSRSRSYSRS
        RGRS +  R +SRS S S
Subjt:  RGRSYS--RSRSRSYSRS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 332.3e-6366.51Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD
        MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQF+DPADA DAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S
        G +LLGRELTVVFAEENRK+P EMRAR+   GR  + RR+P RY   SRS  P   R  SRS +YYSP     + RSISPR+ RY   RSY RSP    S
Subjt:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S

Query:  RGRSYS--RSRSRSYSRS
        RGRS +  R +SRS S S
Subjt:  RGRSYS--RSRSRSYSRS

AT1G55310.2 SC35-like splicing factor 333.0e-6366.2Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD
        MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQF+DPADA DAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S
        G +LLGRELTVVFAEENRK+P EMRAR+   GR  + RR+P RY   SRS  P   R  SRS +YYSP     + RSISPR+ RY   RSY RSP    S
Subjt:  GQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRY---SRS--PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSPYD--S

Query:  RGRSYSRSRSRSYSRS
        RGRS +  R +S S S
Subjt:  RGRSYSRSRSRSYSRS

AT1G55310.3 SC35-like splicing factor 332.0e-5961.9Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG------------EPRGFGFVQFVD
        MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G            +PRGFGFVQF+D
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR-GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG------------EPRGFGFVQFVD

Query:  PADATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRR--SPLRYSRS----PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-R
        PADA DAK+ +DG +LLGRELTVVFAEENRK+P EMRAR+   G  +  RR   P  YSRS    P   R  SRS +YYSP     + RSISPR+ RY  
Subjt:  PADATDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRR--SPLRYSRS----PHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-R

Query:  ERSYLRSPYD--SRGRSYS--RSRSRSYSRS
         RSY RSP    SRGRS +  R +SRS S S
Subjt:  ERSYLRSPYD--SRGRSYS--RSRSRSYSRS

AT3G13570.1 SC35-like splicing factor 30A7.4e-6265.6Show/hide
Query:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR--GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYEL
        MRGR  SY+PSPPR YGRR RSPSPR R  G R  DLPTSLLVRNL+HDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGF+QF+DPADA +AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRHRSPSPRDR--GGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYEL

Query:  DGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY---RRSPLRYSRSP---HYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSP--Y
        DG +LLGRELTVVFAEENRK+P EMR RD   GRS  +   RRSP RYSRSP      R  SRS  Y SP      SRS+SP+DRRY +ERSY RSP   
Subjt:  DGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNY---RRSPLRYSRSP---HYDRKYSRSPEYYSPAQSGRYSRSISPRDRRY-RERSYLRSP--Y

Query:  DSRGRSYSRSRSRSYSRS
         SR RS S  R +S+SRS
Subjt:  DSRGRSYSRSRSRSYSRS

AT5G18810.1 SC35-like splicing factor 284.5e-3545.11Show/hide
Query:  RGRSYSYSP-----SPPRSY-----GRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADA
        R RS SYSP     SPPR        R    PS RD    G   P+ LL+RNL  D RP DLR  F RFGPLKDIYLPR+YY+GEPRGFGFV++    DA
Subjt:  RGRSYSYSP-----SPPRSY-----GRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADA

Query:  TDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSP-------------EYYSPAQSGR-YSRSISPRDR
         +A   ++ +V+ GRE+ +VFAEENRK P+EMR  + + GR  +Y+R+  R  R  +     SRSP             + YSP +  R  SRS  PR+ 
Subjt:  TDAKYELDGQVLLGRELTVVFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSP-------------EYYSPAQSGR-YSRSISPRDR

Query:  RYRERSYLRSPYDS------RGRSYSRSRSRSYSR
        R  +    RSP +       R R  SRSRSRS SR
Subjt:  RYRERSYLRSPYDS------RGRSYSRSRSRSYSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTAGAAGTTACAGCTATAGTCCCTCCCCACCAAGGAGTTATGGTAGGAGACATCGTAGCCCTAGTCCACGGGATCGAGGAGGCCGTGGAAGGGATCTACCGAC
AAGCCTTTTGGTTCGGAACCTACAACATGACTGCAGGCCAGAGGACCTACGTGGGTTATTTGGGCGGTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATT
CTGGAGAGCCACGTGGCTTTGGATTTGTTCAGTTTGTTGATCCTGCTGATGCCACTGATGCCAAGTATGAACTGGATGGCCAAGTTCTCCTGGGTCGTGAATTAACTGTT
GTATTTGCTGAGGAGAATAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATCCAGGGGTCGGTCCTACAACTACAGGCGCTCTCCACTGCGATATTCTCGATCACC
ACACTATGATCGAAAATATTCACGTAGCCCAGAGTACTATTCCCCTGCTCAGTCTGGCCGATATTCACGGTCAATCTCACCAAGAGACCGGAGGTACAGGGAGCGGTCCT
ACTTGAGGTCACCTTATGATTCAAGGGGCCGCAGCTATAGCCGAAGCAGGAGCCGGAGCTATAGCCGAAGTTATTGTAGG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTAGAAGTTACAGCTATAGTCCCTCCCCACCAAGGAGTTATGGTAGGAGACATCGTAGCCCTAGTCCACGGGATCGAGGAGGCCGTGGAAGGGATCTACCGAC
AAGCCTTTTGGTTCGGAACCTACAACATGACTGCAGGCCAGAGGACCTACGTGGGTTATTTGGGCGGTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATT
CTGGAGAGCCACGTGGCTTTGGATTTGTTCAGTTTGTTGATCCTGCTGATGCCACTGATGCCAAGTATGAACTGGATGGCCAAGTTCTCCTGGGTCGTGAATTAACTGTT
GTATTTGCTGAGGAGAATAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATCCAGGGGTCGGTCCTACAACTACAGGCGCTCTCCACTGCGATATTCTCGATCACC
ACACTATGATCGAAAATATTCACGTAGCCCAGAGTACTATTCCCCTGCTCAGTCTGGCCGATATTCACGGTCAATCTCACCAAGAGACCGGAGGTACAGGGAGCGGTCCT
ACTTGAGGTCACCTTATGATTCAAGGGGCCGCAGCTATAGCCGAAGCAGGAGCCGGAGCTATAGCCGAAGTTATTGTAGG
Protein sequenceShow/hide protein sequence
MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLQHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDGQVLLGRELTV
VFAEENRKRPEEMRARDSSRGRSYNYRRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRRYRERSYLRSPYDSRGRSYSRSRSRSYSRSYCR