; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g1183 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1183
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionVQ domain-containing protein
Genome locationMC05:16042072..16042305
RNA-Seq ExpressionMC05g1183
SyntenyMC05g1183
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]9.37e-3277.11Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        M+  AARNQ QLRGPRPPPLTVN +S  I KKST N     RRSP+I+YLRSPKIIHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.52e-2874.12Show/hide
Query:  SAAARNQL--QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        ++AARNQL  +LRGPRPPPLTVN +S KI KKST        NRR PVIVYLRSPKIIHVRPEEFK FVQRLTGN  SSVAVVA+
Subjt:  SAAARNQL--QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

KAG6690545.1 hypothetical protein I3842_10G021000 [Carya illinoinensis]1.59e-1860.87Show/hide
Query:  QLRGPRPPPLTVNGASVKILKKSTANR-RSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        QL+GPRP P+TV+ +S+KI K   + + RSPVI+YL+SPK+IHVRPEEF   VQRLTGN+  SVA  +S
Subjt:  QLRGPRPPPLTVNGASVKILKKSTANR-RSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]3.96e-2970.79Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVN-GASVKILKKSTAN----------RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        ++SAAARN  QLRGPRPPPLTVN  +S  I KKST N          RRSP+I+YLRSPK+IHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVN-GASVKILKKSTAN----------RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]8.84e-3277.11Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        M+  AARNQ QLRGPRPPPLTVN +S  I KKST N     RRSP+I+YLRSPKIIHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein1.92e-2970.79Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVN-GASVKILKKSTAN----------RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        ++SAAARN  QLRGPRPPPLTVN  +S  I KKST N          RRSP+I+YLRSPK+IHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVN-GASVKILKKSTAN----------RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

A0A1S3B975 protein MKS1-like4.28e-3277.11Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        M+  AARNQ QLRGPRPPPLTVN +S  I KKST N     RRSP+I+YLRSPKIIHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

A0A2I4H538 protein MKS1-like1.26e-1760.87Show/hide
Query:  QLRGPRPPPLTVNGASVKILKKSTANR-RSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        QL GPRP PLTV+ +S+KI K   + + RSPVI YL+SPK+IHVRPEEF   VQRLTGN+  S A  +S
Subjt:  QLRGPRPPPLTVNGASVKILKKSTANR-RSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

A0A2N9GB07 VQ domain-containing protein9.09e-1959.46Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTANRR--SPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSS
        M S   +  LQL+GPRP PLTVN +S KI K+   NR   SPVI+YL+SPK+IHVRPEEF   VQ+LTGN+  S
Subjt:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTANRR--SPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSS

A0A5D3DP92 Protein MKS1-like4.54e-3277.11Show/hide
Query:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        M+  AARNQ QLRGPRPPPLTVN +S  I KKST N     RRSP+I+YLRSPKIIHVRPEEFK FVQRLTGNR SSVAVVAS
Subjt:  MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTAN-----RRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B3.3e-0433.72Show/hide
Query:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        GP+P PL V G S KI+KK                      +     PV +Y  +P+IIH  P  F   VQRLTG  ++S    +S
Subjt:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

Q8LGD5 Protein MKS14.7e-0643.24Show/hide
Query:  RNQLQLRGPRPPPLTVNGASVKILK-----KSTANR--------RSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        + QLQ+ GPRP PL+V+  S KI K         NR        R PV++Y  SPK++H    EF   VQRLTG
Subjt:  RNQLQLRGPRPPPLTVNGASVKILK-----KSTANR--------RSPVIVYLRSPKIIHVRPEEFKIFVQRLTG

Q9CA36 VQ motif-containing protein 8, chloroplastic2.7e-0645.31Show/hide
Query:  QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        ++ G RP  L + G S  I K S+         R SPVI+Y  SPK+IH R E+F   VQRLTG
Subjt:  QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG

Q9LS54 VQ motif-containing protein 203.9e-0545Show/hide
Query:  PRPPPLTVNGASVKILK-------KSTANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        P PP L VN  S  I K        S A  R PVI+Y  +P+IIH  P++F   VQ+LTG
Subjt:  PRPPPLTVNGASVKILK-------KSTANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding2.4e-0533.72Show/hide
Query:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS
        GP+P PL V G S KI+KK                      +     PV +Y  +P+IIH  P  F   VQRLTG  ++S    +S
Subjt:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS

AT1G21326.1 VQ motif-containing protein1.3e-0638.75Show/hide
Query:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSS
        GPRP PL V G S KI+KK                      +     PVI+Y  SP+IIH  P  F   VQRLTG  ++S
Subjt:  GPRPPPLTVNGASVKILKK---------------------STANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSS

AT1G68450.1 VQ motif-containing protein1.9e-0745.31Show/hide
Query:  QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        ++ G RP  L + G S  I K S+         R SPVI+Y  SPK+IH R E+F   VQRLTG
Subjt:  QLRGPRPPPLTVNGASVKILKKSTA-------NRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG

AT3G18360.1 VQ motif-containing protein2.8e-0645Show/hide
Query:  PRPPPLTVNGASVKILK-------KSTANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        P PP L VN  S  I K        S A  R PVI+Y  +P+IIH  P++F   VQ+LTG
Subjt:  PRPPPLTVNGASVKILK-------KSTANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTG

AT3G18690.1 MAP kinase substrate 13.3e-0743.24Show/hide
Query:  RNQLQLRGPRPPPLTVNGASVKILK-----KSTANR--------RSPVIVYLRSPKIIHVRPEEFKIFVQRLTG
        + QLQ+ GPRP PL+V+  S KI K         NR        R PV++Y  SPK++H    EF   VQRLTG
Subjt:  RNQLQLRGPRPPPLTVNGASVKILK-----KSTANR--------RSPVIVYLRSPKIIHVRPEEFKIFVQRLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCGCCGCCGCGAGGAACCAGTTGCAATTGCGCGGTCCAAGGCCGCCGCCGTTGACGGTGAACGGAGCCTCCGTCAAGATCCTCAAGAAATCGACGGCGAATCG
CCGGTCTCCGGTCATCGTGTACCTCCGATCGCCGAAGATTATCCACGTCCGGCCTGAGGAGTTCAAGATCTTCGTTCAACGCCTCACCGGAAACCGAACCTCCTCCGTCG
CCGTCGTCGCATCG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCGCCGCCGCGAGGAACCAGTTGCAATTGCGCGGTCCAAGGCCGCCGCCGTTGACGGTGAACGGAGCCTCCGTCAAGATCCTCAAGAAATCGACGGCGAATCG
CCGGTCTCCGGTCATCGTGTACCTCCGATCGCCGAAGATTATCCACGTCCGGCCTGAGGAGTTCAAGATCTTCGTTCAACGCCTCACCGGAAACCGAACCTCCTCCGTCG
CCGTCGTCGCATCG
Protein sequenceShow/hide protein sequence
MSSAAARNQLQLRGPRPPPLTVNGASVKILKKSTANRRSPVIVYLRSPKIIHVRPEEFKIFVQRLTGNRTSSVAVVAS