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MC05g1232 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1232
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed DNA polymerase, family B, conserved site
Genome locationMC05:16565088..16565606
RNA-Seq ExpressionMC05g1232
SyntenyMC05g1232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935266.1 uncharacterized protein LOC111442204 [Cucurbita moschata]3.57e-4455.31Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMV---HDYSEAEAVDEVEKWRQLCGPSRVLF
        MDG LNKI   LIA+F LTFL L+AQILY+L   SRR     A    ++C + FCWRNQ RIEPKEIAC+    H++  A A   VE+W++L GPSR LF
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMV---HDYSEAEAVDEVEKWRQLCGPSRVLF

Query:  TINEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPS--PTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        TI E   EEE EGIESS        T  FHTPC SP YY TPSPS  PTR   +FP D      HNRT PF AIEI +H
Subjt:  TINEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPS--PTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

XP_022983133.1 uncharacterized protein LOC111481774 [Cucurbita maxima]3.16e-4455.68Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT
        MDG LNKI   LIA+F LTFL L+AQILY+L   SRR     A    K+C + FCWRNQSRI+PKEIA +   H   EA AV  VE+W++L GPSR LFT
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT

Query:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPP-YYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        I E   EEE EG ESS        T  FHTPC SP  Y+TPSPSPTR   +FP D      HNRT PF A+EI +H
Subjt:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPP-YYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

XP_023005969.1 uncharacterized protein LOC111498829 [Cucurbita maxima]3.76e-4758.66Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL
        MDG L KIATALI++F++TFL LLAQIL+     SR           + C + FCWR ++RIEP EIA  VHD S   E  AVD E+EKWR LCGPSR L
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL

Query:  FTINEAAEEEEREGIESSE--PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        FTI E  EEEEREG+ES E  P+ PD DTTPF+TPC SPP++TPSP  T   ADFP    SP G +RTA F AIEI TH
Subjt:  FTINEAAEEEEREGIESSE--PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

XP_023528874.1 uncharacterized protein LOC111791670 [Cucurbita pepo subsp. pepo]1.11e-4456.25Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT
        MDG LNKI   LIA+F LTFL L+AQILY+L  R  +     A    ++C + FCWRNQ RIEPKEIAC+   H   EA AV  VE+W++L GPSR LFT
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT

Query:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        I E   EEE EGIESS        T  FHTPC SP YY TPSPSPTR   +FP D      HNRT PF AIEI +H
Subjt:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

XP_038905411.1 uncharacterized protein LOC120091450 [Benincasa hispida]7.85e-4554.74Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVL-RHRSRRDSDSVAVLKVKECGFRFCW-RNQSRIEPKEIACMVHDYSEAE---------AVD-EVEKWRQ
        MDG LNK ATA+IAVF LTFL L+AQILY L R R +R  +       ++C + FCW RNQSRIEPKE+  +     + E         AVD E+EKW++
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVL-RHRSRRDSDSVAVLKVKECGFRFCW-RNQSRIEPKEIACMVHDYSEAE---------AVD-EVEKWRQ

Query:  LCGPSRVLFTINEAAEEEEREGIESSEPRFP------DPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRT
        LCGPSR LFTI E  EEEEREGI       P      D DTTPFHTPCASPPY+TPS SPTR + DFPAD    S  N T PF  I+I T
Subjt:  LCGPSRVLFTINEAAEEEEREGIESSEPRFP------DPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRT

TrEMBL top hitse value%identityAlignment
A0A5A7TPT7 Uncharacterized protein1.20e-4053.4Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAV--------DEVEKWRQLC
        MDG LNKIAT LI +F   F  LLAQILY+L +R RR          ++C + F WRNQSRI+PKEI  +  +  +S   AV        DE+ KW++LC
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAV--------DEVEKWRQLC

Query:  GPSRVLFTINEAAEEEEREGI----ESSEPRFP----DPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        GPSR LFTI E   EEEREGI    E + P FP    D DTTPFHTPCASPPY TPS SP+R   DFPAD   P   N T PF AI+I TH
Subjt:  GPSRVLFTINEAAEEEEREGI----ESSEPRFP----DPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

A0A6J1F429 uncharacterized protein LOC1114422041.73e-4455.31Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMV---HDYSEAEAVDEVEKWRQLCGPSRVLF
        MDG LNKI   LIA+F LTFL L+AQILY+L   SRR     A    ++C + FCWRNQ RIEPKEIAC+    H++  A A   VE+W++L GPSR LF
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMV---HDYSEAEAVDEVEKWRQLCGPSRVLF

Query:  TINEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPS--PTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        TI E   EEE EGIESS        T  FHTPC SP YY TPSPS  PTR   +FP D      HNRT PF AIEI +H
Subjt:  TINEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYY-TPSPS--PTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

A0A6J1FQJ7 uncharacterized protein LOC1114478773.99e-4356.74Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL
        MDG LNKIATALI++F++TFL LLAQIL+     SR           + C + F WR ++RIEP EIA  V+D S   E  AVD E+EKWR LCGPSR L
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL

Query:  FTINEAAEEEEREGIESSE-PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        FTI E  EEEEREGIES E    PD DTTPFHTPC SPP++  SPSPTR   DFP    S  G      F AIEI TH
Subjt:  FTINEAAEEEEREGIESSE-PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

A0A6J1J6W6 uncharacterized protein LOC1114817741.53e-4455.68Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT
        MDG LNKI   LIA+F LTFL L+AQILY+L   SRR     A    K+C + FCWRNQSRI+PKEIA +   H   EA AV  VE+W++L GPSR LFT
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACM--VHDYSEAEAVDEVEKWRQLCGPSRVLFT

Query:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPP-YYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        I E   EEE EG ESS        T  FHTPC SP  Y+TPSPSPTR   +FP D      HNRT PF A+EI +H
Subjt:  INEAAEEEEREGIESSEPRFPDPDTTPFHTPCASPP-YYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

A0A6J1L0U5 uncharacterized protein LOC1114988291.82e-4758.66Show/hide
Query:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL
        MDG L KIATALI++F++TFL LLAQIL+     SR           + C + FCWR ++RIEP EIA  VHD S   E  AVD E+EKWR LCGPSR L
Subjt:  MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYS---EAEAVD-EVEKWRQLCGPSRVL

Query:  FTINEAAEEEEREGIESSE--PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH
        FTI E  EEEEREG+ES E  P+ PD DTTPF+TPC SPP++TPSP  T   ADFP    SP G +RTA F AIEI TH
Subjt:  FTINEAAEEEEREGIESSE--PRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11640.1 unknown protein5.6e-0734.32Show/hide
Query:  LNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRF---CWRN--QSRIEPKE--IACMVHDYSEAEAVDEVE-----KWRQLCGP
        L      L+AV     L L A++ Y+   R    + S+     KE  F+F   C +N   SRIEP    ++  + +   A AV E E     KWR     
Subjt:  LNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRF---CWRN--QSRIEPKE--IACMVHDYSEAEAVDEVE-----KWRQLCGP

Query:  SRVLFTINE-------------AAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYYTPSPSPTRRTAD
        SR+LFTI E             +AE +    ++   P     D TPF TPC SPPY+TPSPSP R   D
Subjt:  SRVLFTINE-------------AAEEEEREGIESSEPRFPDPDTTPFHTPCASPPYYTPSPSPTRRTAD

AT3G52480.1 unknown protein2.5e-0734.18Show/hide
Query:  LNKIATALIAVFSLTFLALLAQILYVL------RHR----------SRRDSDSVAV---LKVKECGFRFCWRN-QSRIEPKEIACMVHDYSEAEAVDEV-
        L   AT L+AVF+   +A+ AQ  YVL      R R          S R  D  A     K     F FC  N Q RI       +    + A  V++V 
Subjt:  LNKIATALIAVFSLTFLALLAQILYVL------RHR----------SRRDSDSVAV---LKVKECGFRFCWRN-QSRIEPKEIACMVHDYSEAEAVDEV-

Query:  EKW-----RQLCGPSRVLFTINE--AAEEEEREG---------------------------IESSEPRFPD-PDTTPFHTPCASPPYYTPSPSPTR
         KW       LCGPS  LFTI E   +E + R G                           I   E  F     TTPF TPCASPP+YTPSPSP R
Subjt:  EKW-----RQLCGPSRVLFTINE--AAEEEEREG---------------------------IESSEPRFPD-PDTTPFHTPCASPPYYTPSPSPTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGGCATTTGAACAAGATCGCCACCGCACTCATCGCTGTCTTTTCGCTCACTTTCCTCGCTCTCCTCGCCCAGATCCTCTACGTTCTCCGCCACCGCAGCCGCCG
TGATTCCGATTCTGTAGCTGTGTTAAAAGTGAAGGAATGCGGGTTCCGTTTCTGCTGGAGGAACCAATCGCGGATCGAACCCAAAGAGATCGCGTGTATGGTCCACGATT
ATTCGGAGGCCGAGGCGGTGGACGAGGTCGAGAAGTGGCGGCAGCTGTGCGGACCCTCCAGAGTTCTGTTCACTATCAACGAAGCGGCCGAAGAAGAGGAGAGAGAAGGA
ATCGAATCTTCCGAGCCGCGTTTTCCAGATCCCGATACGACACCGTTTCACACCCCCTGCGCTTCTCCTCCCTACTACACGCCCTCGCCTTCGCCCACGCGCCGCACCGC
CGATTTTCCGGCGGACGATACTTCTCCCTCCGGTCACAACCGAACGGCACCGTTTTTCGCAATAGAAATTCGCACTCAC
mRNA sequenceShow/hide mRNA sequence
ATGGACGGGCATTTGAACAAGATCGCCACCGCACTCATCGCTGTCTTTTCGCTCACTTTCCTCGCTCTCCTCGCCCAGATCCTCTACGTTCTCCGCCACCGCAGCCGCCG
TGATTCCGATTCTGTAGCTGTGTTAAAAGTGAAGGAATGCGGGTTCCGTTTCTGCTGGAGGAACCAATCGCGGATCGAACCCAAAGAGATCGCGTGTATGGTCCACGATT
ATTCGGAGGCCGAGGCGGTGGACGAGGTCGAGAAGTGGCGGCAGCTGTGCGGACCCTCCAGAGTTCTGTTCACTATCAACGAAGCGGCCGAAGAAGAGGAGAGAGAAGGA
ATCGAATCTTCCGAGCCGCGTTTTCCAGATCCCGATACGACACCGTTTCACACCCCCTGCGCTTCTCCTCCCTACTACACGCCCTCGCCTTCGCCCACGCGCCGCACCGC
CGATTTTCCGGCGGACGATACTTCTCCCTCCGGTCACAACCGAACGGCACCGTTTTTCGCAATAGAAATTCGCACTCAC
Protein sequenceShow/hide protein sequence
MDGHLNKIATALIAVFSLTFLALLAQILYVLRHRSRRDSDSVAVLKVKECGFRFCWRNQSRIEPKEIACMVHDYSEAEAVDEVEKWRQLCGPSRVLFTINEAAEEEEREG
IESSEPRFPDPDTTPFHTPCASPPYYTPSPSPTRRTADFPADDTSPSGHNRTAPFFAIEIRTH