; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g1243 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1243
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCytochrome b6
Genome locationMC05:16671275..16671646
RNA-Seq ExpressionMC05g1243
SyntenyMC05g1243
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0022904 - respiratory electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR023530 - Cytochrome b6, PetB
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABI97446.1 cytochrome b6, partial [Cucumis sativus]7.39e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

AHM88865.1 cytochrome b6, partial [Lagenaria siceraria]7.63e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

QCY72872.1 PetB [Cucumis hystrix]5.26e-8195.93Show/hide
Query:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
        + + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
Subjt:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI

Query:  RSVHRWSASMMVLMMILHVFRVY
        RSVHRWSASMMVLMMILHVFRVY
Subjt:  RSVHRWSASMMVLMMILHVFRVY

YP_004841813.1 cytochrome b6 [Cucumis melo subsp. melo]7.89e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

YP_009456091.1 cytochrome b6 [Momordica charantia]5.80e-8195.93Show/hide
Query:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
        + + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
Subjt:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI

Query:  RSVHRWSASMMVLMMILHVFRVY
        RSVHRWSASMMVLMMILHVFRVY
Subjt:  RSVHRWSASMMVLMMILHVFRVY

TrEMBL top hitse value%identityAlignment
A0A1X9Q1E4 Cytochrome b6 (Fragment)3.58e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

A0A2I6C019 Cytochrome b62.81e-8195.93Show/hide
Query:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
        + + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
Subjt:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI

Query:  RSVHRWSASMMVLMMILHVFRVY
        RSVHRWSASMMVLMMILHVFRVY
Subjt:  RSVHRWSASMMVLMMILHVFRVY

A0A4Y5RD28 Cytochrome b62.55e-8195.93Show/hide
Query:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
        + + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI
Subjt:  DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLI

Query:  RSVHRWSASMMVLMMILHVFRVY
        RSVHRWSASMMVLMMILHVFRVY
Subjt:  RSVHRWSASMMVLMMILHVFRVY

X2F2W5 Cytochrome b6 (Fragment)3.58e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

X2F3N3 Cytochrome b6 (Fragment)3.70e-8197.52Show/hide
Query:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
        + SYTVLRGGSPWFTYLNKVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS
Subjt:  RISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRS

Query:  VHRWSASMMVLMMILHVFRVY
        VHRWSASMMVLMMILHVFRVY
Subjt:  VHRWSASMMVLMMILHVFRVY

SwissProt top hitse value%identityAlignment
A0A365 Cytochrome b64.3e-5497.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

P56773 Cytochrome b64.3e-5497.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

Q49KW8 Cytochrome b64.3e-5497.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

Q4VZI6 Cytochrome b64.3e-5497.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

Q8S8W0 Cytochrome b64.3e-5497.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal3.3e-0935.06Show/hide
Query:  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
        P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H   ASM ++++ LH+FR
Subjt:  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR

ATCG00720.1 photosynthetic electron transfer B3.0e-5597.14Show/hide
Query:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
        ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH
Subjt:  LNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILH

Query:  VFRVY
        VFRVY
Subjt:  VFRVY

ATMG00220.1 apocytochrome b3.3e-0935.06Show/hide
Query:  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR
        P +++ ++  G +   C ++Q+ TG  +  +Y P V  AF SV++IM +   GWL+R +H   ASM ++++ LH+FR
Subjt:  PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCTACGCATCTCATATACGGTTCTCAGAGGGGGTTCCCCTTGGTTTACCTACCTTAATAAAGTGTATGATTGGTTCAAAGAACGTCTTGAAATTCAGGCGATTGCAGA
TGATATAACTAGCAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGGGTTTGCTATGACTT
TTTACTATCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATG
ATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTN
mRNA sequenceShow/hide mRNA sequence
GATCTACGCATCTCATATACGGTTCTCAGAGGGGGTTCCCCTTGGTTTACCTACCTTAATAAAGTGTATGATTGGTTCAAAGAACGTCTTGAAATTCAGGCGATTGCAGA
TGATATAACTAGCAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGGGTTTGCTATGACTT
TTTACTATCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATG
ATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTN
Protein sequenceShow/hide protein sequence
DLRISYTVLRGGSPWFTYLNKVYDWFKERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASM
MVLMMILHVFRVYX