; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g1478 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1478
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationMC05:18750187..18751516
RNA-Seq ExpressionMC05g1478
SyntenyMC05g1478
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442527.1 PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]5.37e-6880.29Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI S +PIKQS P TAPFPPSN    +P  L+ R S+ N KR ST+VAAVGDVS+DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ G+ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022145689.1 uncharacterized protein LOC111015082 [Momordica charantia]1.62e-92100Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022935020.1 uncharacterized protein LOC111442008 [Cucurbita moschata]1.88e-6880.29Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRI S +PIKQ+ P  APFPPSNQ   +P AL+ R S++  +R ST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022971601.1 uncharacterized protein LOC111470276 [Cucurbita maxima]1.28e-6881.02Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI SADPIK   P  APFPPSN    +P AL+ R S+ N+KRTST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022983996.1 uncharacterized protein LOC111482446 [Cucurbita maxima]1.32e-6881.75Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRI S +PIKQ+ P  APFPPSNQ   +P AL+ R S+    RTST+VAAVGDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
TrEMBL top hitse value%identityAlignment
A0A0A0LDN8 Uncharacterized protein2.60e-6881.02Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI S +PIKQS P  APFPPSN    KP  L+ R S+ N KR ST+VAAVGDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+  +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1CVZ8 uncharacterized protein LOC1110150827.86e-93100Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1F9E5 uncharacterized protein LOC1114420089.08e-6980.29Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRI S +PIKQ+ P  APFPPSNQ   +P AL+ R S++  +R ST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1I3R1 uncharacterized protein LOC1114702766.19e-6981.02Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI SADPIK   P  APFPPSN    +P AL+ R S+ N+KRTST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1J3Y5 uncharacterized protein LOC1114824466.39e-6981.75Show/hide
Query:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRI S +PIKQ+ P  APFPPSNQ   +P AL+ R S+    RTST+VAAVGDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02160.1 unknown protein1.3e-3578.89Show/hide
Query:  KKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        +  +S +VAAVGDVS+DGT YLI GA+AVALVGTAFPILF RKD CPECDGAGFVR+GG  LRANAARKD  QIVCA CNGLGKLNQ+DK
Subjt:  KKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCTTGTGTTCATTTCCACGCATTTTCTCTGCAGACCCCATCAAGCAATCGCCGCCGCCCACCGCCCCTTTTCCGCCGTCCAATCAATTCGCCGGGAAACCGCC
GGCCTTGGCCTTCCGGCATAGCACCGCCAACAAGAAGAGAACTTCCACGCTGGTTGCCGCTGTCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCC
TCGCCGTCGCTCTCGTCGGAACTGCCTTCCCCATCCTCTTCTCTCGCAAAGATTTGTGTCCGGAATGCGACGGCGCCGGGTTTGTCCGGCAGGGAGGGGCGGCGCTGAGG
GCAAATGCGGCTCGGAAAGACCAAACTCAGATCGTTTGTGCCCGTTGCAATGGCCTCGGCAAGCTCAACCAAGTCGACAAATAA
mRNA sequenceShow/hide mRNA sequence
CTGCAATCTTTCATCCCAATCCGACGCGTGTAAATTTATTACACGTCAAAAACATAAGTGTGTTATACAAACTATATTTTAAACACAAAACAAAAAAGTTCAATATCTTC
AACTCACACACATTCTTAGATTGAAGGTTGAAGGTTGAAACTTATAATTTAGCATAACAATACTTTCCTACTAGCTACATGGAGCTCGCCACTAAATTTTTTACAAACAT
GTTTTAAAGAAAAAATCTACTCTCTCCTTCTGGTCAAAATTTAGAGTATTTTCCTTAAACATCATAAAATCCAGAATGTGGGCCATCCTTATCTGCAGAGGTGCGAGAAC
TTGAAGTCCGACGTAGCCTTATCCATAATCCAAATTTCGAACCACCAAATATAAAACTAAAACCTCCATCATCACCAATATTCAGATCCAATTTCTTCAGTTCCCAAACA
ATAAACATGGCATCCTTGTGTTCATTTCCACGCATTTTCTCTGCAGACCCCATCAAGCAATCGCCGCCGCCCACCGCCCCTTTTCCGCCGTCCAATCAATTCGCCGGGAA
ACCGCCGGCCTTGGCCTTCCGGCATAGCACCGCCAACAAGAAGAGAACTTCCACGCTGGTTGCCGCTGTCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCG
GCGCCCTCGCCGTCGCTCTCGTCGGAACTGCCTTCCCCATCCTCTTCTCTCGCAAAGATTTGTGTCCGGAATGCGACGGCGCCGGGTTTGTCCGGCAGGGAGGGGCGGCG
CTGAGGGCAAATGCGGCTCGGAAAGACCAAACTCAGATCGTTTGTGCCCGTTGCAATGGCCTCGGCAAGCTCAACCAAGTCGACAAATAAATGTATAAACTTTTTCCGTT
TTTATTTGATTTCGTTTTCAATTTCCGTTTTAAATATAATCCTAAATTACATATTTTATTAATGTGAATGTAATTAAGTATTAAAATATGTTATTAGTTCATCTACTTCT
CAATTTTGCTTGTGATAAAATATTTGTCGAAGTGAATAAAGTTCAACAGTAATTAAC
Protein sequenceShow/hide protein sequence
MASLCSFPRIFSADPIKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALR
ANAARKDQTQIVCARCNGLGKLNQVDK