; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC05g1482 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC05g1482
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionlight-harvesting complex-like protein OHP1, chloroplastic
Genome locationMC05:18763332..18764804
RNA-Seq ExpressionMC05g1482
SyntenyMC05g1482
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137791.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus]7.15e-5682.64Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI
        MASSS +L SSL PARA T N QD R CLFQIG SVRAN+SRAR  FR+QAA K PAGVELPKVEPKF+APFLGFTKTAEIWNSRACM+GL+GIF+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI

Query:  LDKGILQVIGVDVGKGLDLPL
        L+KGILQVIGVDVGKGLDLPL
Subjt:  LDKGILQVIGVDVGKGLDLPL

XP_022145630.1 light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]1.04e-75100Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_022934608.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata]1.42e-6485.71Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA M+GL+GIF+VELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_023526506.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita pepo subsp. pepo]1.16e-6384.87Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASS+ +LSSSLLPA AP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA M+GL+GIF+VELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]4.40e-6889.92Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASSSA+LSSSLLPARAP  ++QDGRLCLFQIGSVRANNSR+RVPFRVQAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACM+GL+GIF+VELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein3.46e-5682.64Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI
        MASSS +L SSL PARA T N QD R CLFQIG SVRAN+SRAR  FR+QAA K PAGVELPKVEPKF+APFLGFTKTAEIWNSRACM+GL+GIF+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI

Query:  LDKGILQVIGVDVGKGLDLPL
        L+KGILQVIGVDVGKGLDLPL
Subjt:  LDKGILQVIGVDVGKGLDLPL

A0A5A7TRS8 High-light-induced protein8.14e-5583.47Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGS-VRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI
        MASSS +L SSL PARA T N+QDGR  LFQIGS VRANNSRAR  FRVQAA K PAGVELPKVEPKFEAPFLGFTKTAEIWNSRACM+GL+G F+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGS-VRANNSRARVPFRVQAA-KLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELI

Query:  LDKGILQVIGVDVGKGLDLPL
        L+K ILQVIGVDVGKGLDLPL
Subjt:  LDKGILQVIGVDVGKGLDLPL

A0A6J1CV10 light-harvesting complex-like protein OHP1, chloroplastic5.04e-76100Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1F851 light-harvesting complex-like protein OHP1, chloroplastic6.86e-6585.71Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA M+GL+GIF+VELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1J0W8 light-harvesting complex-like protein OHP1, chloroplastic6.86e-6585.71Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA M+GL+GIF+VELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic8.1e-2656.3Show/hide
Query:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        SS+ LSSSL    +       GR   LC           +R + PF V+AAKLP GV +PK +PK +  FLGFT+TAEIWNSRACM+GL+G FIVELIL+
Subjt:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein5.7e-2756.3Show/hide
Query:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD
        SS+ LSSSL    +       GR   LC           +R + PF V+AAKLP GV +PK +PK +  FLGFT+TAEIWNSRACM+GL+G FIVELIL+
Subjt:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILD

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTCCTCTGCGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACTGGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCAAATTGGTTCAGTCCGTGC
CAACAACAGCAGGGCTCGTGTCCCTTTTAGGGTTCAGGCCGCAAAGCTTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATGGGCCTCGTTGGGATTTTCATAGTAGAGCTGATTTTGGACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGTAAAGGCCTAGATCTTCCTCTATGA
mRNA sequenceShow/hide mRNA sequence
CTACAATTTCCCGATGGTCAATAATCAGTGAAGTGAAAACAATTTGAACAAATCTGAAAATCCTCCGGATCTAGTGGGACCCAGACTTCAGCCTGGCATTTAATCCAACG
TGGAGAAAAGAGTTCCGGAAAATAAAATTAAAGAGGGAAATTTTGATAAGATTACCGAAGCAGTGGTTGTGGTTGTGTTGAAGCATTACCAAATAATGGCGTCTTCCTCT
GCGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACTGGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCAAATTGGTTCAGTCCGTGCCAACAACAGCAGGGC
TCGTGTCCCTTTTAGGGTTCAGGCCGCAAAGCTTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAA
TCTGGAATTCCAGAGCCTGCATGATGGGCCTCGTTGGGATTTTCATAGTAGAGCTGATTTTGGACAAAGGAATACTTCAGGTGATTGGAGTTGATGTTGGTAAAGGCCTA
GATCTTCCTCTATGATTTCCAGAAAACTTGTAATCATCTTGAGATCCTCTGTTCTTTCATTCAAAATTGTAACTGTAACAGAGCACTTTCAACTGTATCAGAGAATTCTA
CAATCTTCAAGTTCTTAAACTTCAAAAGTTTTTACATAACATCGTCAGTGTAGAGAATATGTTCACTCTCTTGTCTTCTGTAAGGATTCCTAATAACCAGAACTCGAGAA
TATTGCAAACTAAATAACCCTACAGATTCGAGTATCGATAACAGGCACCTTGGAAGGAGGCTGAGCTATGTCCAGTGCTTCTGCCAGTGATAACCTGCGATTCCTCCAAG
CAAGTTGCGCCCATTTCTTCATCTGCTCTCCTTGAGTCTTTCTATTCTGTTGGACGCTAAGTACCTCCCCATACCCACCTACAGAGGCAACCTGATGTCAGTGACTAGTT
TCATTATCGGTCAATACTCAGGTCACCACGGTTATGAAGCTATGTCTCTGCTACAATATCATATGAATTTATGAGAGATTTTCAACCATAATCAGTGGCGGGGTATGATC
AGTTCATCTGGGTATCATTTAAGAGTGCAACTGAAAGCTGTCAAATGTTTAACCACTAAAACTCTAGTTATAAACATTTTGATCTGATGCACTGAATTGTTTGTTCTTTA
TATAAGCCTCGAGCCAAATGCTTAGAGTCGCTT
Protein sequenceShow/hide protein sequence
MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMMGLVGIFIVELILDKGILQVIGVD
VGKGLDLPL