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MC06g0055 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0055
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNase H domain-containing protein
Genome locationMC06:360614..360943
RNA-Seq ExpressionMC06g0055
SyntenyMC06g0055
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273199.1 unnamed protein product [Prunus armeniaca]2.86e-0831.25Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL
        N  L G Q +P  +  +   +Y ++++ + + +H   RS ++     +WRPP  N FKLN D A    P     GA++RDS G LV A  ++ PS +  L
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL

Query:  LTEIWGILEAIK
         TE++ +   + 
Subjt:  LTEIWGILEAIK

XP_017251987.1 PREDICTED: uncharacterized protein LOC108222599 [Daucus carota subsp. sativus]1.91e-0833.64Show/hide
Query:  QISPLVMRGEWILNYFNQYEQARIKSHTA--NRSTATSQAHQQWRPPAENSFKLNTDVACRPNLS--SIGAVLRDSNGFLVAATMIQHPSPLPPLLTEIW
        +I P     E   N  +++ +AR +   A  NRS A S ++++WRPP +   K+N D +  P     S+G V+RD NG  +AA ++  P P   L  E  
Subjt:  QISPLVMRGEWILNYFNQYEQARIKSHTA--NRSTATSQAHQQWRPPAENSFKLNTDVACRPNLS--SIGAVLRDSNGFLVAATMIQHPSPLPPLLTEIW

Query:  GILEAIK
        G+ EA+ 
Subjt:  GILEAIK

XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]2.87e-1937.27Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT
        NS  HG  +S   +R  WI +YF  Y QA+     + + ++      +W PP +++ K+N+D ACR   + +G ++RD  G L+ A  +  P PL PL  
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT

Query:  EIWGILEAIK
        EI GILEA+K
Subjt:  EIWGILEAIK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.01e-2243.64Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT
        NS +HGKQ+SP+  + EW+  + + + QA++ +++    +      Q WRP +  S KLNTD ACR   +S G ++RDS+  LVAAT I+ P PL PLL 
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT

Query:  EIWGILEAIK
        EI  ILE +K
Subjt:  EIWGILEAIK

XP_030478232.1 uncharacterized protein LOC115695297 [Cannabis sativa]3.53e-0729.46Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTD--VACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL
        N   HG +  P  +   + ++Y  +Y+ AR K   A  S A+  A   W  P     KLNTD  V+   N S  GAVLR++ G +VA   +       P 
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTD--VACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL

Query:  LTEIWGILEAIK
        + E   ++ +++
Subjt:  LTEIWGILEAIK

TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047861.39e-1937.27Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT
        NS  HG  +S   +R  WI +YF  Y QA+     + + ++      +W PP +++ K+N+D ACR   + +G ++RD  G L+ A  +  P PL PL  
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT

Query:  EIWGILEAIK
        EI GILEA+K
Subjt:  EIWGILEAIK

A0A6J1DX30 uncharacterized protein LOC1110248744.36e-2243.64Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT
        NS +HGKQ+SP+  + EW+  + + + QA++ +++    +      Q WRP +  S KLNTD ACR   +S G ++RDS+  LVAAT I+ P PL PLL 
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT

Query:  EIWGILEAIK
        EI  ILE +K
Subjt:  EIWGILEAIK

A0A6J1DZK3 uncharacterized protein LOC1110249684.18e-0730.91Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT
        ++ ++ K+I   +++ EWIL Y    E+ R+K H   +         +WRPP     K+NTD A     S +G +LR+ N  +V A M+       PLL 
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLT

Query:  EIWGILEAIK
        +I  I E + 
Subjt:  EIWGILEAIK

A0A6J5UA97 RNase H domain-containing protein1.39e-0831.25Show/hide
Query:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL
        N  L G Q +P  +  +   +Y ++++ + + +H   RS ++     +WRPP  N FKLN D A    P     GA++RDS G LV A  ++ PS +  L
Subjt:  NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPL

Query:  LTEIWGILEAIK
         TE++ +   + 
Subjt:  LTEIWGILEAIK

A0A803Q1A0 Uncharacterized protein5.55e-0736.96Show/hide
Query:  NYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLTEIWGILEAIK
        +Y   Y+ A+ K     + T+  +  Q+W PP   S KLNTD A   R N +  GA++RD  G ++AAT       L P   E W +LEA+K
Subjt:  NYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVAC--RPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLTEIWGILEAIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTCTTTTCTACATGGAAAGCAAATTTCTCCTCTTGTCATGAGAGGCGAATGGATTCTAAATTACTTCAACCAATATGAACAAGCTAGGATTAAGTCACATACCGCTAA
CAGGAGTACCGCTACTTCTCAAGCCCATCAGCAATGGAGACCTCCAGCAGAAAATTCCTTTAAATTGAACACGGACGTGGCTTGTAGACCAAATTTATCTTCCATCGGGG
CTGTGCTTCGTGATTCAAATGGTTTCCTTGTTGCGGCAACAATGATTCAACATCCTTCTCCCCTGCCTCCTCTGTTGACGGAAATTTGGGGAATTTTGGAAGCCATAAAA
mRNA sequenceShow/hide mRNA sequence
AATTCTTTTCTACATGGAAAGCAAATTTCTCCTCTTGTCATGAGAGGCGAATGGATTCTAAATTACTTCAACCAATATGAACAAGCTAGGATTAAGTCACATACCGCTAA
CAGGAGTACCGCTACTTCTCAAGCCCATCAGCAATGGAGACCTCCAGCAGAAAATTCCTTTAAATTGAACACGGACGTGGCTTGTAGACCAAATTTATCTTCCATCGGGG
CTGTGCTTCGTGATTCAAATGGTTTCCTTGTTGCGGCAACAATGATTCAACATCCTTCTCCCCTGCCTCCTCTGTTGACGGAAATTTGGGGAATTTTGGAAGCCATAAAA
Protein sequenceShow/hide protein sequence
NSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRDSNGFLVAATMIQHPSPLPPLLTEIWGILEAIK