; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0060 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0060
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDET1- and DDB1-associated protein 1
Genome locationMC06:390469..391928
RNA-Seq ExpressionMC06g0060
SyntenyMC06g0060
Gene Ontology termsGO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domainsIPR033575 - DET1- and DDB1-associated protein 1
IPR036361 - SAP domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057775.1 apoptotic chromatin condensation inducer in the nucleus [Cucumis melo var. makuwa]5.47e-4486.87Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVA A+SSRKRAGEKISDSRAK+A AQVCS+KGASN+E PSK L NLTVERLRALLKA+GLS +GKKASI
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

KAG7021398.1 hypothetical protein SDJN02_15123 [Cucurbita argyrosperma subsp. argyrosperma]1.29e-4287.88Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVAAA+SSRKRAGEKISD RAKR +AQV S KGASNSE PSK   NLTVERLRALLKARGLS KGKKASI
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

XP_008464442.1 PREDICTED: uncharacterized protein LOC103502327 [Cucumis melo]3.86e-4283.84Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVA A+SSRKRAGEKISDSRAK+A AQVCS+KGASN+E PSK L NLTVERLRALLKA+GLS +GKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

XP_022135549.1 uncharacterized protein LOC111007476 [Momordica charantia]2.27e-5396.97Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

XP_038878488.1 uncharacterized protein LOC120070711 [Benincasa hispida]8.01e-4283.84Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKN+SSKDGKG AAA+SSRKRAGEKISDSRAKRA AQVCS KGASN+E PSK L NLTVERLRALLKA+GLS +GKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

TrEMBL top hitse value%identityAlignment
A0A0A0LNX7 DET1- and DDB1-associated protein 12.16e-4181.82Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVA  +SSRKRAGEKISDSRAK+A AQVCS+KGASN+E P+K L NLTVERLRALLKA+GLS +GKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

A0A1S3CLX1 DET1- and DDB1-associated protein 11.87e-4283.84Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVA A+SSRKRAGEKISDSRAK+A AQVCS+KGASN+E PSK L NLTVERLRALLKA+GLS +GKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

A0A5A7UW19 DET1- and DDB1-associated protein 12.65e-4486.87Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVA A+SSRKRAGEKISDSRAK+A AQVCS+KGASN+E PSK L NLTVERLRALLKA+GLS +GKKASI
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

A0A6J1C1R1 DET1- and DDB1-associated protein 11.10e-5396.97Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

A0A6J1KMN1 DET1- and DDB1-associated protein 13.06e-4184.85Show/hide
Query:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI
        PEDQ+IKTNQQNILIRSLMLKNSSSKDGKGVAAA+SSRKRAGEKISD RAKR +AQV S KGASNSE PSK   NLTVERLRALLKARGLS KGKK  +
Subjt:  PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63460.1 SAP domain-containing protein1.1e-1350Show/hide
Query:  PEDQDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK
        PE Q IKTNQQNILIRSL+LK     SSSKD KG  A D  +KRA  +  D R+    A   S +  S+S    +   +LTVE+LRA+LK +GL  KG+K
Subjt:  PEDQDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK

AT5G63460.2 SAP domain-containing protein3.2e-1351Show/hide
Query:  PEDQDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK
        PE Q IKTNQQNILIRSL+LK     SSSKD KG  A D  +KRA  +  D R+    A   S +G S+S    +   +LTVE+LRA+LK +GL  KG+K
Subjt:  PEDQDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK

AT5G63460.4 SAP domain-containing protein2.1e-1249.48Show/hide
Query:  QDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK
        Q IKTNQQNILIRSL+LK     SSSKD KG  A D  +KRA  +  D R+    A   S +  S+S    +   +LTVE+LRA+LK +GL  KG+K
Subjt:  QDIKTNQQNILIRSLMLK----NSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGAGGATCAAGACATAAAGACAAATCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAAATTCCAGTTCAAAGGATGGAAAGGGAGTAGCTGCAGCTGACTCCTC
CCGGAAGAGGGCTGGTGAAAAAATTTCAGATAGCAGAGCGAAGAGGGCCAGCGCACAAGTATGTTCAACCAAAGGAGCATCAAACAGTGAAGTACCGAGTAAGCATCTCT
ATAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCCAGAGGCCTTTCGCCCAAAGGAAAGAAGGCAAGTATATGCAAACCAAAACAAGGAAGTTGTGGATTACCG
TTTCCTCAACATGTAGTTAGAAGTAAATTATACTTGAACCGAAAGTTAGCCATGGGTATCTGTATTCATTTTGATGATGGGAAA
mRNA sequenceShow/hide mRNA sequence
CCAGAGGATCAAGACATAAAGACAAATCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAAATTCCAGTTCAAAGGATGGAAAGGGAGTAGCTGCAGCTGACTCCTC
CCGGAAGAGGGCTGGTGAAAAAATTTCAGATAGCAGAGCGAAGAGGGCCAGCGCACAAGTATGTTCAACCAAAGGAGCATCAAACAGTGAAGTACCGAGTAAGCATCTCT
ATAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCCAGAGGCCTTTCGCCCAAAGGAAAGAAGGCAAGTATATGCAAACCAAAACAAGGAAGTTGTGGATTACCG
TTTCCTCAACATGTAGTTAGAAGTAAATTATACTTGAACCGAAAGTTAGCCATGGGTATCTGTATTCATTTTGATGATGGGAAA
Protein sequenceShow/hide protein sequence
PEDQDIKTNQQNILIRSLMLKNSSSKDGKGVAAADSSRKRAGEKISDSRAKRASAQVCSTKGASNSEVPSKHLYNLTVERLRALLKARGLSPKGKKASICKPKQGSCGLP
FPQHVVRSKLYLNRKLAMGICIHFDDGK