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MC06g0089 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0089
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCentromere protein X
Genome locationMC06:599134..600424
RNA-Seq ExpressionMC06g0089
SyntenyMC06g0089
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006281 - DNA repair (biological process)
GO:0007129 - synapsis (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135388.1 protein MHF2 homolog [Momordica charantia]4.80e-6196.26Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCE    VEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]2.20e-5790.65Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEES FD DLIHAIFKLEWSRRSLERE+NESSDAMDCE    V+AGTSKKSRPMSANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]2.20e-5790.65Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEES FD DLIHAIFKLEW+RRSLERE+NESSDAMDCE    V+AGTSKKSRPMSANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]7.66e-5891.59Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEES FD DLIHAIFKLEWSRRSLERE+NESSDAMDCE    V+AGTSKKSRPMSANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

XP_038879195.1 protein MHF2 homolog isoform X1 [Benincasa hispida]8.60e-5586.92Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEE+AF  DLIHAIFKLEWSRRSLERE+NE+ DAMDCE    V+AGTSKKSRPMSANANALKLSSKL+QIF+SEAVQRAATIAEAEGI+RIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein6.78e-5184.26Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESS-DAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERI
        MEE+ F  DLIHAIFKLEWSRRSLERE+NE++ DAMDCE  +   AGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGISRIE THLER+
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESS-DAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERI

Query:  LPQLLLDF
        LPQLLLDF
Subjt:  LPQLLLDF

A0A1S3CLK5 centromere protein X isoform X28.59e-5384.11Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEE+ F  DLIHAIFKLEWSRRSLERE+NE+ DAMDCE  +   AGTSKKSRPMSANANALKLSSKL+QIFISEAVQRAATIAEAEGI RIE THLER+L
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

A0A6J1C4N9 protein MHF2 homolog2.32e-6196.26Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCE    VEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

A0A6J1E4X1 protein MHF2 homolog1.06e-5790.65Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEES FD DLIHAIFKLEWSRRSLERE+NESSDAMDCE    V+AGTSKKSRPMSANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

A0A6J1JD93 protein MHF2 homolog1.06e-5790.65Show/hide
Query:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL
        MEES FD DLIHAIFKLEW+RRSLERE+NESSDAMDCE    V+AGTSKKSRPMSANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLERIL
Subjt:  MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERIL

Query:  PQLLLDF
        PQLLLDF
Subjt:  PQLLLDF

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X3.5e-0441.38Show/hide
Query:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        K      + +AL+L  +LL++F+ EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

P0DJH7 Centromere protein X1.3e-0649.02Show/hide
Query:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X6.4e-0643.1Show/hide
Query:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        K +    + +AL+L ++LL+IF+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q5RBU1 Centromere protein X3.5e-0441.38Show/hide
Query:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        K      + +AL+L  +LL++F+ EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog4.5e-2867.31Show/hide
Query:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL
        + FD DLIHAIFK  W+RR  ERER+++ DA + E    V  GT+KK+R  SANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IEATHLERILPQL
Subjt:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL

Query:  LLDF
        LLDF
Subjt:  LLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein3.2e-2967.31Show/hide
Query:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL
        + FD DLIHAIFK  W+RR  ERER+++ DA + E    V  GT+KK+R  SANANALKLS +LL+ F+SEAVQRAA IAEAEG+ +IEATHLERILPQL
Subjt:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL

Query:  LLDF
        LLDF
Subjt:  LLDF

AT1G78790.2 unknown protein1.4e-1954.81Show/hide
Query:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL
        + FD DLIHAIFK  W+RR  ERER+++ DA + E    V  GT+KK+R                    SEAVQRAA IAEAEG+ +IEATHLERILPQL
Subjt:  SAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQL

Query:  LLDF
        LLDF
Subjt:  LLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAGCGCATTCGATCATGATCTAATCCACGCCATTTTCAAGCTCGAGTGGAGCAGGAGATCACTTGAGCGCGAGAGAAATGAGAGTTCTGATGCTATGGATTG
CGAGTATTTACTACAGGTTGAGGCTGGAACATCCAAGAAGAGCAGACCAATGTCAGCCAATGCAAATGCACTTAAGTTGAGCTCTAAACTACTACAGATATTTATCTCAG
AGGCTGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTGCCACAGTTACTACTGGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
GCAAGGCAATCAGAAAACAAATCAGAACTATTGGTGTGGGCAAGTTGAAATTTGAAAGTTGCTTGTGGCGGTGTCGTAGTCGCCGGTTTCGTTCCCTATGGAAGAGAGCG
CATTCGATCATGATCTAATCCACGCCATTTTCAAGCTCGAGTGGAGCAGGAGATCACTTGAGCGCGAGAGAAATGAGAGTTCTGATGCTATGGATTGCGAGTATTTACTA
CAGGTTGAGGCTGGAACATCCAAGAAGAGCAGACCAATGTCAGCCAATGCAAATGCACTTAAGTTGAGCTCTAAACTACTACAGATATTTATCTCAGAGGCTGTACAGCG
TGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTGCCACAGTTACTACTGGATTTTTAAGGTAGCATTCCGTTTCACA
TATTTCAATGTCCTGCTCTTGAAAATTAAGTTCTGGATTATATGGAGCGATTGTTTGGCCTATATTAGTCATTAATGAGTGAGTTTTCTATTTACAAGAAAGG
Protein sequenceShow/hide protein sequence
MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEYLLQVEAGTSKKSRPMSANANALKLSSKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF