; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0199 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0199
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationMC06:1588441..1590170
RNA-Seq ExpressionMC06g0199
SyntenyMC06g0199
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]1.54e-17695.63Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

XP_022134700.1 chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]7.40e-184100Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

XP_022933773.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita moschata]8.92e-17696.43Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRP ASRSRFL+GS  KLHRELSVKPVAA  SSS KVEAKKGEWLPGLPSP YLNGSL GDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]8.92e-17695.63Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFL+GSS KLHR LSVKPVAA SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]6.54e-17896.43Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

TrEMBL top hitse value%identityAlignment
A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic7.46e-17795.63Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic7.46e-17795.63Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic3.58e-184100Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

A0A6J1F5S4 Chlorophyll a-b binding protein, chloroplastic4.32e-17696.43Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRP ASRSRFL+GS  KLHRELSVKPVAA  SSS KVEAKKGEWLPGLPSP YLNGSL GDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic1.24e-17595.24Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFL+GSS KLHR LSVKPVAA SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic5.1e-6248.54Show/hide
Query:  ASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT
        A+++ FL G   ++ + ++     +++ S++  +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  ASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +     A   E + KEI NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
        AMLA +G   QH  TG GP +NL  H++DP H TI   F
Subjt:  AMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.2e-12585.2Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC S+ RFL+GSS +L+R+LS   + ++  +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)7.0e-8867.08Show/hide
Query:  FRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLP
        FR     S   SGS     R+++V+               KG WLPGL SP YL+GSL GDNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+P
Subjt:  FRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLP

Query:  EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLA
        EV TK G++NAP+W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP LE KEKE+ANGRLA
Subjt:  EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLA

Query:  MLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGG
        MLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT  G
Subjt:  MLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.4e-12887.3Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSS KL+R ++ +PV    S+S KVEAKKGEWLPGL SPGYL GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQT GGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic2.3e-6250Show/hide
Query:  ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG
        AS+A+     S   FL G   +L ++L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG
Subjt:  ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG

Query:  VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLE
         AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A   E
Subjt:  VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
         + KEI NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   F
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 68.1e-5542.47Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSS--KLHRE--LSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL
        + +  T +++ V  P   R    S SS+  +L RE  + V+    +SS    +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSS--KLHRE--LSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  +VGYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--

Query:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
             P +  + KEI NGRLAMLAFLGF  Q   T + P ENL+ H++DP H  +   F
Subjt:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF

AT1G45474.1 photosystem I light harvesting complex gene 59.5e-5648.28Show/hide
Query:  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        +SS + R +S    AA    +  V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFL

Query:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        GF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 59.5e-5648.28Show/hide
Query:  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        +SS + R +S    AA    +  V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFL

Query:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        GF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.0e-12685.2Show/hide
Query:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC S+ RFL+GSS +L+R+LS   + ++  +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF

AT3G61470.1 photosystem I light harvesting complex gene 21.6e-6350Show/hide
Query:  ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG
        AS+A+     S   FL G   +L ++L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG
Subjt:  ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG

Query:  VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLE
         AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A   E
Subjt:  VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF
         + KEI NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   F
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAA
GCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAAGGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGTCTTCCGGGGGACA
ATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTG
CTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCAT
TCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCT
ACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGGCCAAGGAGAAGGAGATCGCCAACGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTT
CAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAA
mRNA sequenceShow/hide mRNA sequence
CACAGCCAGGGCCCCACAGCATCATTATTCGGCCAATGGAAACCAAGAAACAGATTCGAAGATATTACTCAAAGGATAAAGCGATAAGGCCCCATCGGTGCCTTCCCCAA
ATTCTGGCCGTTGGATCGCGGAAATCTTGGCTACCAACCGTCAGATCCGAAGAGCGAACGAGAACCACAAGCTTTAGCTTGGCATTGAAGTGAAGTTACAAAGGGCAGCA
AATTAGTCCCCCATCTCTTACTCTGAAGATCCATTTTCTTCCTCAACCCCCCAAAACAAAAGATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGC
GCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAAGCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAA
GGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGTCTTCCGGGGGACAATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGT
GGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGG
TACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCC
AGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCTACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGG
CCAAGGAGAAGGAGATCGCCAACGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTTCAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCAC
ATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAACTAAATTGGTTTCCAAATTGAAATTGAAATTGTTGTTAAGCATTGCGATGAACTGAAAT
TCTTTTGAGATGGAGTTTAGTGAATGTTAGTGTACAGGGGTGGGGGGATGAGGCTACCATGTGGCTTCCATGTTATGATGTTTAAATGAGACATTCCTTCACTTGATATA
TGAGTTGGGTTTTGCTTAGTTTCAACATTCAGATATTCACTTCACTTACAGTCAAATTCGAAGGTTGTTTATTTATTTTTTCAAGTTAGAGGTTTGAACCCTTCAATTTC
GATCCAACTTTTCACATTTTTTCTCCGGAACAAAGGAAATCAAAATATAGTTTTGTC
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIV
QHNVTGKGPFENLLQHISDPWHNTIVQTFGGN