; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0209 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0209
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontranscription factor UNE10-like
Genome locationMC06:1742632..1744573
RNA-Seq ExpressionMC06g0209
SyntenyMC06g0209
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR031066 - Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587566.1 Transcription factor PIF7, partial [Cucurbita argyrosperma subsp. sororia]3.36e-9264.11Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD---MKGKIDATCSTRPAPAAVNHNHNHS
        W QS +DTLESIV SS++RKR R N     CK+E LMSW  S ESH  + KT++S + +   D S   EEDD   MKGK D +CS R   AA+NHN   S
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD---MKGKIDATCSTRPAPAAVNHNHNHS

Query:  ERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-------LQMSLLARRMGLLDSDSMAAA----P
        +R+RRDRINQKMKDLQKLVPNGSK DRASLLDDTI+YLKQLQAQVQFM SIR++ PQM MPLGIQQQ       LQMSLLA  MGLL++DS A +    P
Subjt:  ERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-------LQMSLLARRMGLLDSDSMAAA----P

Query:  CA---PSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        CA   P PP L+    STTKPK NLSTSAF PPTDPFCTFLAQ SM+MD YSKMVTLYCQEVNKTPRQ       + + E IKEDMH
Subjt:  CA---PSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

XP_004138310.2 transcription factor UNE10 [Cucumis sativus]5.60e-9267.15Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER
        W +S EDTLESIV SS++RKR R N    C KDETLM+ + S ESH +  K++NS Q +   HD S  E+E +MKGK D +CS R    A   NHN  ER
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER

Query:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL
        RRRDRINQ+MKDLQKLVPNGSKTDRASLLDDTI+YLKQLQAQVQFM SIR A+PQM MPLGIQQQ LQMSLLA RMGLL + SMA++    PCA + P +
Subjt:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL

Query:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
         + S  STTKPK  LST AFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVN+TP QQ SK++QS RI   KEDMH
Subjt:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

XP_022134760.1 transcription factor UNE10-like [Momordica charantia]4.91e-184100Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR
        WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR

Query:  DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK
        DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK
Subjt:  DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK

Query:  PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
Subjt:  PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

XP_022972844.1 transcription factor UNE10-like [Cucurbita maxima]6.22e-9365.71Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD--MKGKIDATCSTRPAPAAVNHNHNHSE
        W QS +DTLESIV SS++RKR R N     CK+E LMSW  S ESH  + KTE+S + +   D S   +EDD  MKGK D +CS     AA+NHN   S+
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD--MKGKIDATCSTRPAPAAVNHNHNHSE

Query:  RRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCA---PS
        R+RRDRINQKMKDLQKLVPNGSK DRASLLDDTI+YLKQLQAQVQFM SIR++ PQM  PLGIQQQ LQMSLLA  MGLL++DS A +    PCA   P 
Subjt:  RRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCA---PS

Query:  PPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        PP L+ S  STTKPK NLSTSAFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVNKTPRQ       + + E IKEDMH
Subjt:  PPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

XP_038878568.1 transcription factor UNE10-like [Benincasa hispida]1.19e-9266.79Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVH-DASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRR
        WGQS +DTLESIV SS++RKR R +  EYC KDETLMS   S +SH +  K++NS Q +  D   SEEE +M+GK D +CST+   AA+ HN   SERRR
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVH-DASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRR

Query:  RDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL
        R RI QKMKDLQKLVPNGSKTDRASLLDDTI+YLKQLQAQVQFM SIR A+PQM MPLGIQQQ   LQMS+LA RMG LD+ SMA++    PCA + PP+
Subjt:  RDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL

Query:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        L+ S  STTKPK   STS+FVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVN+TPRQ  SK++Q   ++ IKEDMH
Subjt:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

TrEMBL top hitse value%identityAlignment
A0A0A0LSD5 BHLH domain-containing protein6.45e-9367.15Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER
        W +S EDTLESIV SS++RKR R N    C KDETLM+ + S ESH +  K++NS Q +   HD S  E+E +MKGK D +CS R    A   NHN  ER
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER

Query:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL
        RRRDRINQ+MKDLQKLVPNGSKTDRASLLDDTI+YLKQLQAQVQFM SIR A+PQM MPLGIQQQ LQMSLLA RMGLL + SMA++    PCA + P +
Subjt:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIR-ALPQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCAPS-PPL

Query:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
         + S  STTKPK  LST AFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVN+TP QQ SK++QS RI   KEDMH
Subjt:  LVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

A0A1S3BWW4 transcription factor UNE107.82e-9065.47Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER
        W +S EDTLESIV SS++RKR R +N EY  KDETLM+ + S ESH +  K++NS Q +   HD S  EEE +MKGK+  +CS R    A   NHN  ER
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER

Query:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAAP-----CAPSPP
        RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTI+YLKQLQAQVQFM SIR+  QM MPLGIQQQ   LQMSLLA R GLLD+ S+A++       A  P 
Subjt:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAAP-----CAPSPP

Query:  LLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        +L+ S  STTKPK   ST AFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVN+TP QQ +K++QS RI   KEDMH
Subjt:  LLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

A0A5A7UWV9 Transcription factor UNE101.95e-9065.47Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER
        W +S EDTLESIV SS++RKR R +N EY  KDETLM+ + S ESH +  K++NS Q +   HD S  EEE +MKGK+  +CS R    A   NHN  ER
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV---HDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSER

Query:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAAP-----CAPSPP
        RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTI+YLKQLQAQVQFM SIR+  QM MPLGIQQQ   LQMSLLA R GLLD+ S+A++       A  P 
Subjt:  RRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQ---LQMSLLARRMGLLDSDSMAAAP-----CAPSPP

Query:  LLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        +L+ S  STTKPK   ST AFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVN+TP QQ +K++QS RI   KEDMH
Subjt:  LLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

A0A6J1BZ83 transcription factor UNE10-like2.38e-184100Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR
        WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRR

Query:  DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK
        DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK
Subjt:  DRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTK

Query:  PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
Subjt:  PKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

A0A6J1ICR5 transcription factor UNE10-like3.01e-9365.71Show/hide
Query:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD--MKGKIDATCSTRPAPAAVNHNHNHSE
        W QS +DTLESIV SS++RKR R N     CK+E LMSW  S ESH  + KTE+S + +   D S   +EDD  MKGK D +CS     AA+NHN   S+
Subjt:  WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQV--HDASASEEEDD--MKGKIDATCSTRPAPAAVNHNHNHSE

Query:  RRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCA---PS
        R+RRDRINQKMKDLQKLVPNGSK DRASLLDDTI+YLKQLQAQVQFM SIR++ PQM  PLGIQQQ LQMSLLA  MGLL++DS A +    PCA   P 
Subjt:  RRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-PQMGMPLGIQQQ-LQMSLLARRMGLLDSDSMAAA----PCA---PS

Query:  PPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH
        PP L+ S  STTKPK NLSTSAFVPPTDPFCTFLAQ SM+MD YSKMVTLYCQEVNKTPRQ       + + E IKEDMH
Subjt:  PPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH

SwissProt top hitse value%identityAlignment
O80536 Transcription factor PIF35.1e-1240Show/hide
Query:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN
        ++     RK         C    +  S D   ES   +LK ++S  Q  D  + + EE+   G+ +A        S R   A V   HN SERRRRDRIN
Subjt:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN

Query:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS
        +KM+ LQ+L+PN +K D+AS+LD+ I+YLK LQ QVQ MS
Subjt:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS

Q0JNI9 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 151.9e-1138Show/hide
Query:  KTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-
        K +   Q    AS  ++ DD  G +  + +     +     HN SERRRRDRIN+KM+ LQ+L+PN +K D+AS+LD+ I+YLK LQ QVQ MS    L 
Subjt:  KTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRAL-

Query:  -PQMGMPLGIQQQLQMSLLAR----------RMGLLDSDSMAAAPCAPSP
         P M +P  + Q LQ+  +A            MG+ D  +  A    P P
Subjt:  -PQMGMPLGIQQQLQMSLLAR----------RMGLLDSDSMAAAPCAPSP

Q10CH5 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 131.9e-1143.36Show/hide
Query:  SHHQNLKTENSTQQVHDA--SASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQF
        S H+    E+S  +  DA   A+EE      +  +   TR A       HN SERRRRDRIN+KM+ LQ+L+P+ +KTD+AS+LD+ I+YLK LQ QVQ 
Subjt:  SHHQNLKTENSTQQVHDA--SASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQF

Query:  MSSIRALPQMGMP
        M     +  M  P
Subjt:  MSSIRALPQMGMP

Q570R7 Transcription factor PIF72.1e-2138.4Show/hide
Query:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD
        T MSW  SFES  ++LKT  +  + +  S SE      +E + +G+   +   R   AA+   HN SERRRRDRINQ+M+ LQKL+P  SK D+ S+LDD
Subjt:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD

Query:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST
         I++LKQLQAQVQFM S+RA       +PQ+  P  +                   QQQ QMSLLA   RMG+    +      P  P PP++V    + 
Subjt:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST

Query:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR
             + +  +    +DP+  F A Q+MNMDLY+KM   +Y Q+ ++T +
Subjt:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR

Q8GZ38 Transcription factor UNE107.6e-2440.61Show/hide
Query:  SFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQ
        S  SH   +   +S    H     E+E++ K    ++ ST+ + AA    HN SER+RRD+INQ+MK LQKLVPN SKTD+AS+LD+ I+YLKQLQAQV 
Subjt:  SFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQ

Query:  FMSSIRALPQMGMPLGI--QQQLQMSLLARRM-----------GLLDSDSM----AAAP-----CAPSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCT
         MS +  +P M +P+ +  QQQLQMSL++  M           GLLD +SM    A+AP       P+P L ++  +       +   S  +P  DP   
Subjt:  FMSSIRALPQMGMPLGI--QQQLQMSLLARRM-----------GLLDSDSM----AAAP-----CAPSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCT

Query:  FLA--QQSMNMDLYSKMVTLYCQEVNKTP
        FLA   Q   M+ YS+M TLY Q   + P
Subjt:  FLA--QQSMNMDLYSKMVTLYCQEVNKTP

Arabidopsis top hitse value%identityAlignment
AT1G09530.1 phytochrome interacting factor 33.6e-1340Show/hide
Query:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN
        ++     RK         C    +  S D   ES   +LK ++S  Q  D  + + EE+   G+ +A        S R   A V   HN SERRRRDRIN
Subjt:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN

Query:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS
        +KM+ LQ+L+PN +K D+AS+LD+ I+YLK LQ QVQ MS
Subjt:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS

AT1G09530.2 phytochrome interacting factor 33.6e-1340Show/hide
Query:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN
        ++     RK         C    +  S D   ES   +LK ++S  Q  D  + + EE+   G+ +A        S R   A V   HN SERRRRDRIN
Subjt:  IVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASE-EEDDMKGKIDA------TCSTRPAPAAVNHNHNHSERRRRDRIN

Query:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS
        +KM+ LQ+L+PN +K D+AS+LD+ I+YLK LQ QVQ MS
Subjt:  QKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMS

AT4G00050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.4e-2540.61Show/hide
Query:  SFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQ
        S  SH   +   +S    H     E+E++ K    ++ ST+ + AA    HN SER+RRD+INQ+MK LQKLVPN SKTD+AS+LD+ I+YLKQLQAQV 
Subjt:  SFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIKYLKQLQAQVQ

Query:  FMSSIRALPQMGMPLGI--QQQLQMSLLARRM-----------GLLDSDSM----AAAP-----CAPSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCT
         MS +  +P M +P+ +  QQQLQMSL++  M           GLLD +SM    A+AP       P+P L ++  +       +   S  +P  DP   
Subjt:  FMSSIRALPQMGMPLGI--QQQLQMSLLARRM-----------GLLDSDSM----AAAP-----CAPSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCT

Query:  FLA--QQSMNMDLYSKMVTLYCQEVNKTP
        FLA   Q   M+ YS+M TLY Q   + P
Subjt:  FLA--QQSMNMDLYSKMVTLYCQEVNKTP

AT5G61270.1 phytochrome-interacting factor71.5e-2238.4Show/hide
Query:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD
        T MSW  SFES  ++LKT  +  + +  S SE      +E + +G+   +   R   AA+   HN SERRRRDRINQ+M+ LQKL+P  SK D+ S+LDD
Subjt:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD

Query:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST
         I++LKQLQAQVQFM S+RA       +PQ+  P  +                   QQQ QMSLLA   RMG+    +      P  P PP++V    + 
Subjt:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST

Query:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR
             + +  +    +DP+  F A Q+MNMDLY+KM   +Y Q+ ++T +
Subjt:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR

AT5G61270.2 phytochrome-interacting factor71.5e-2238.4Show/hide
Query:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD
        T MSW  SFES  ++LKT  +  + +  S SE      +E + +G+   +   R   AA+   HN SERRRRDRINQ+M+ LQKL+P  SK D+ S+LDD
Subjt:  TLMSWDNSFESHHQNLKTENSTQQVHDASASE------EEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDD

Query:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST
         I++LKQLQAQVQFM S+RA       +PQ+  P  +                   QQQ QMSLLA   RMG+    +      P  P PP++V    + 
Subjt:  TIKYLKQLQAQVQFMSSIRA-------LPQMGMPLGI-------------------QQQLQMSLLA--RRMGLLDSDS--MAAAPCAPSPPLLVHSTTST

Query:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR
             + +  +    +DP+  F A Q+MNMDLY+KM   +Y Q+ ++T +
Subjt:  TKPKVNLSTSAFVPPTDPFCTFLAQQSMNMDLYSKM-VTLYCQEVNKTPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGGGCAATCGTCGGAGGATACACTGGAGTCCATAGTCCAAAGTTCAGTGGCGAGGAAACGGGCACGGCCCAACAACACAGAATATTGTTGCAAAGATGAAACTTTGAT
GAGTTGGGATAATTCTTTTGAATCTCATCATCAGAACTTGAAAACCGAAAACTCCACTCAACAAGTACATGATGCCTCAGCCTCGGAGGAAGAAGATGATATGAAGGGGA
AAATAGACGCCACCTGCTCAACTAGACCAGCTCCAGCGGCTGTTAATCATAATCATAATCACTCCGAGAGAAGACGAAGAGATCGAATAAACCAGAAGATGAAAGATCTG
CAAAAGTTGGTGCCAAATGGGAGTAAGACGGATAGAGCTTCACTTTTGGATGACACGATTAAATACTTGAAGCAACTTCAAGCACAAGTTCAATTCATGTCCAGCATCAG
AGCTTTGCCGCAGATGGGCATGCCTCTAGGAATACAGCAGCAGCTTCAAATGTCACTACTGGCTCGCCGCATGGGACTGCTTGATAGCGATTCAATGGCGGCTGCCCCTT
GTGCTCCCTCTCCTCCTCTTCTGGTGCATTCCACCACCTCAACAACAAAGCCAAAAGTCAACCTCTCCACGTCTGCTTTCGTCCCTCCGACCGATCCTTTCTGCACTTTC
CTGGCTCAACAATCAATGAATATGGACCTGTACAGTAAGATGGTGACACTGTATTGCCAAGAAGTGAACAAGACACCGAGGCAGCAAGCAAGCAAAGTAATCCAATCACA
TCGTATAGAAGCAATCAAGGAGGATATGCAT
mRNA sequenceShow/hide mRNA sequence
TGGGGGCAATCGTCGGAGGATACACTGGAGTCCATAGTCCAAAGTTCAGTGGCGAGGAAACGGGCACGGCCCAACAACACAGAATATTGTTGCAAAGATGAAACTTTGAT
GAGTTGGGATAATTCTTTTGAATCTCATCATCAGAACTTGAAAACCGAAAACTCCACTCAACAAGTACATGATGCCTCAGCCTCGGAGGAAGAAGATGATATGAAGGGGA
AAATAGACGCCACCTGCTCAACTAGACCAGCTCCAGCGGCTGTTAATCATAATCATAATCACTCCGAGAGAAGACGAAGAGATCGAATAAACCAGAAGATGAAAGATCTG
CAAAAGTTGGTGCCAAATGGGAGTAAGACGGATAGAGCTTCACTTTTGGATGACACGATTAAATACTTGAAGCAACTTCAAGCACAAGTTCAATTCATGTCCAGCATCAG
AGCTTTGCCGCAGATGGGCATGCCTCTAGGAATACAGCAGCAGCTTCAAATGTCACTACTGGCTCGCCGCATGGGACTGCTTGATAGCGATTCAATGGCGGCTGCCCCTT
GTGCTCCCTCTCCTCCTCTTCTGGTGCATTCCACCACCTCAACAACAAAGCCAAAAGTCAACCTCTCCACGTCTGCTTTCGTCCCTCCGACCGATCCTTTCTGCACTTTC
CTGGCTCAACAATCAATGAATATGGACCTGTACAGTAAGATGGTGACACTGTATTGCCAAGAAGTGAACAAGACACCGAGGCAGCAAGCAAGCAAAGTAATCCAATCACA
TCGTATAGAAGCAATCAAGGAGGATATGCAT
Protein sequenceShow/hide protein sequence
WGQSSEDTLESIVQSSVARKRARPNNTEYCCKDETLMSWDNSFESHHQNLKTENSTQQVHDASASEEEDDMKGKIDATCSTRPAPAAVNHNHNHSERRRRDRINQKMKDL
QKLVPNGSKTDRASLLDDTIKYLKQLQAQVQFMSSIRALPQMGMPLGIQQQLQMSLLARRMGLLDSDSMAAAPCAPSPPLLVHSTTSTTKPKVNLSTSAFVPPTDPFCTF
LAQQSMNMDLYSKMVTLYCQEVNKTPRQQASKVIQSHRIEAIKEDMH