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MC06g0259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING/U-box superfamily protein
Genome locationMC06:2146886..2147095
RNA-Seq ExpressionMC06g0259
SyntenyMC06g0259
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON36160.1 43kDa postsynaptic protein [Parasponia andersonii]5.81e-2463.01Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVV+NLPSVVL   ++   +ALC++C D I VGE AKQLPC H +HG+C  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

PON84354.1 43kDa postsynaptic protein [Trema orientale]5.81e-2463.01Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVV+NLPSVVL   ++   +ALC++C D I VGE AKQLPC H +HG+C  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

XP_010087330.1 uncharacterized protein LOC21395864 [Morus notabilis]1.54e-2461.64Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PAS+TVV+NLPSVVL   ++   +ALC++C D + VGE+AKQLPC H +HG+C  PWL I +TCP+CRHELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

XP_022134761.1 E3 ubiquitin-protein ligase SIRP1-like [Momordica charantia]2.27e-46100Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

XP_022135108.1 E3 ubiquitin-protein ligase AIP2-like [Momordica charantia]9.38e-2464.71Show/hide
Query:  ASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP
        ASRTV+++L SVVL   EED +CSICM+ +++GEEAKQLPC H +HG C R WLEI +TCP+CR+ELP
Subjt:  ASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP

TrEMBL top hitse value%identityAlignment
A0A2P2KU78 Zinc finger protein2.00e-2457.53Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PA+++VV+ LPSVVL   ++   +ALC++C D I +GE AKQLPC H +HGEC  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

A0A2P5AI19 43kDa postsynaptic protein2.81e-2463.01Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVV+NLPSVVL   ++   +ALC++C D I VGE AKQLPC H +HG+C  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

A0A2P5EFQ9 43kDa postsynaptic protein2.81e-2463.01Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVV+NLPSVVL   ++   +ALC++C D I VGE AKQLPC H +HG+C  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

A0A6J1BYP6 E3 ubiquitin-protein ligase SIRP1-like1.10e-46100Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

W9QD04 E3 ubiquitin-protein ligase RING17.45e-2561.64Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PAS+TVV+NLPSVVL   ++   +ALC++C D + VGE+AKQLPC H +HG+C  PWL I +TCP+CRHELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING11.5e-1649.32Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PAS++ ++ LP V +   NL+ E   C++CMD    G EAKQ+PC H +H +C  PWLE+ ++CP+CRHELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

Q3T0W3 E3 ubiquitin-protein ligase RNF1812.2e-1547.14Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PA++T V+NLP  V+  S+ +  C +C+      E A ++PC H FH  C  PWL  T++CPLCRHELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

Q5M974 E3 ubiquitin-protein ligase RNF1812.9e-1548.61Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDAL--CSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PA++ VV++LP V +   + DA   C +C+     GE  +QLPC H FH  C  PWL  T++CPLCRHELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDAL--CSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

Q6AVN2 E3 ubiquitin-protein ligase SIRP11.3e-1548.57Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PA +  V+ LP+V +   EE   CS+C+D + VG +AKQ+PC H FH  C  PWLE+  +CP+CR ELP+
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

Q6GPV5 E3 ubiquitin-protein ligase RNF1811.7e-1550Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDAL--CSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PAS+ VV++LP V +   + DA   C +C+     GE  +QLPC H FH  C  PWL  T++CPLCRHELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDAL--CSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

Arabidopsis top hitse value%identityAlignment
AT3G02340.1 RING/U-box superfamily protein8.3e-1849.32Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDA---LCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PA+++V+Q+LP V L + E D    +C++C D + V E+ ++LPC H +HGEC  PWL I +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVLNLSEEDA---LCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

AT4G26400.1 RING/U-box superfamily protein2.7e-1650.72Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP
        PA + VV NLP+V ++   E   CSIC+D    G EAK++PC H FH  C  PWLE+  +CP+CR+ELP
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP

AT4G26400.2 RING/U-box superfamily protein2.7e-1650.72Show/hide
Query:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP
        PA + VV NLP+V ++   E   CSIC+D    G EAK++PC H FH  C  PWLE+  +CP+CR+ELP
Subjt:  PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELP

AT5G08139.1 RING/U-box superfamily protein1.9e-1745.21Show/hide
Query:  PASRTVVQNLPSVVLNLSEED---ALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        P S++ + NLP V+L    +D    +C++C D + +G +A QLPC H +H EC  PWL++ +TCP+CR+ELPT
Subjt:  PASRTVVQNLPSVVLNLSEED---ALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT

AT5G15820.1 RING/U-box superfamily protein3.7e-1853.42Show/hide
Query:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT
        PAS++VV  LP V L    LS    +C+IC D +   E+ K+LPC H +HGEC  PWL I +TCP+CRHELPT
Subjt:  PASRTVVQNLPSVVL---NLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTGCATCAAGAACAGTGGTTCAGAATCTTCCGTCGGTGGTTCTGAATCTGAGTGAAGAAGATGCATTGTGTTCGATCTGTATGGATCGGATCAGAGTTGGTGAAGAAGC
GAAGCAGTTACCGTGTGGCCATGGATTTCATGGTGAGTGTACAAGGCCATGGTTGGAGATTACAGATACTTGCCCTCTTTGCCGCCATGAATTGCCTACA
mRNA sequenceShow/hide mRNA sequence
CCTGCATCAAGAACAGTGGTTCAGAATCTTCCGTCGGTGGTTCTGAATCTGAGTGAAGAAGATGCATTGTGTTCGATCTGTATGGATCGGATCAGAGTTGGTGAAGAAGC
GAAGCAGTTACCGTGTGGCCATGGATTTCATGGTGAGTGTACAAGGCCATGGTTGGAGATTACAGATACTTGCCCTCTTTGCCGCCATGAATTGCCTACA
Protein sequenceShow/hide protein sequence
PASRTVVQNLPSVVLNLSEEDALCSICMDRIRVGEEAKQLPCGHGFHGECTRPWLEITDTCPLCRHELPT