; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0409 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0409
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptiontRNA-specific adenosine deaminase 2
Genome locationMC06:3286736..3292963
RNA-Seq ExpressionMC06g0409
SyntenyMC06g0409
Gene Ontology termsGO:0002100 - tRNA wobble adenosine to inosine editing (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0052717 - tRNA-specific adenosine-34 deaminase activity (molecular function)
InterPro domainsIPR002125 - Cytidine and deoxycytidylate deaminase domain
IPR016192 - APOBEC/CMP deaminase, zinc-binding
IPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135334.1 tRNA-specific adenosine deaminase 2 [Momordica charantia]3.40e-93100Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

XP_023530916.1 tRNA-specific adenosine deaminase 2-like [Cucurbita pepo subsp. pepo]8.17e-8593.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDGLSTSEVA+K SKCKLYVTCEPCIMCASALSILGI EVYYGCANDKFGGCGSILSLHLGS EAHTSGN QGRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAP PHRPLVHH+
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

XP_038880582.1 tRNA-specific adenosine deaminase TAD2 isoform X1 [Benincasa hispida]5.49e-8593.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDG+ST+EVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN QGRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

XP_038880583.1 tRNA-specific adenosine deaminase TAD2 isoform X2 [Benincasa hispida]4.33e-8593.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDG+ST+EVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN QGRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

XP_038880584.1 tRNA-specific adenosine deaminase TAD2 isoform X3 [Benincasa hispida]1.99e-8593.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDG+ST+EVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN QGRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZX4 CMP/dCMP-type deaminase domain-containing protein1.61e-8493.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDGLSTSEVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  GRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

A0A1S3BVZ1 tRNA-specific adenosine deaminase 2 isoform X41.61e-8493.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDGLSTSEVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  GRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

A0A1S4DZL9 tRNA-specific adenosine deaminase 2 isoform X23.60e-8493.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDGLSTSEVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  GRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

A0A5D3DXI1 tRNA-specific adenosine deaminase 2 isoform X41.61e-8493.13Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAW+RDGLSTSEVADKFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  GRGFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

A0A6J1C158 tRNA-specific adenosine deaminase 21.64e-93100Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

SwissProt top hitse value%identityAlignment
Q5E9J7 tRNA-specific adenosine deaminase 24.4e-2550.82Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEM AID  ++  +R G S SEV   F    LYVT EPCIMCA+AL ++ I  V YGC N++FGGCGS+L +      A       G+ F+CT G 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPK
         A EAV + ++FY+Q NPNAPK
Subjt:  MASEAVALFRSFYEQGNPNAPK

Q5RIV4 tRNA-specific adenosine deaminase 28.3e-2450Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSL---HLGSCEAHTSGNRQGRGFKCT
        ATRHAEM A+D +++ W R  L   +  +   +  LYVT EPCIMCA+AL +L I  V YGC N++FGGCGS+L +   HL     HT     G  FKC 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSL---HLGSCEAHTSGNRQGRGFKCT

Query:  AGTMASEAVALFRSFYEQGNPNAPKP
        AG  A EAV + ++FY+Q NPNAPKP
Subjt:  AGTMASEAVALFRSFYEQGNPNAPKP

Q6IDB6 tRNA-specific adenosine deaminase TAD21.5e-5274.81Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAID L+  W++DGLS S+VA+KFSKC LYVTCEPCIMCASALS LGIKEVYYGC NDKFGGCGSILSLHLGS EA     ++G+G+KC  G 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MA EAV+LF+ FYEQGNPNAPKPHRP+V  +
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

Q6P6J0 tRNA-specific adenosine deaminase 24.9e-2450Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEM AID +++   + G S S V   F    LYVT EPCIMCA+AL ++ I  V YGC N++FGGCGS+L++      A       GR F+C  G 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPK
         A EAV L ++FY+Q NPNAPK
Subjt:  MASEAVALFRSFYEQGNPNAPK

Q7Z6V5 tRNA-specific adenosine deaminase 25.8e-2550Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEM AID +++  ++ G S SEV   F    LYVT EPCIMCA+AL ++ I  V YGC N++FGGCGS+L++      A       GR F+C  G 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPK
         A EAV + ++FY+Q NPNAPK
Subjt:  MASEAVALFRSFYEQGNPNAPK

Arabidopsis top hitse value%identityAlignment
AT1G48175.1 Cytidine/deoxycytidylate deaminase family protein1.0e-5374.81Show/hide
Query:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT
        ATRHAEMEAID L+  W++DGLS S+VA+KFSKC LYVTCEPCIMCASALS LGIKEVYYGC NDKFGGCGSILSLHLGS EA     ++G+G+KC  G 
Subjt:  ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGT

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MA EAV+LF+ FYEQGNPNAPKPHRP+V  +
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

AT5G28050.1 Cytidine/deoxycytidylate deaminase family protein9.8e-0440Show/hide
Query:  TRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYG
        T HAE+ AI    EA K+  L+  E+    S+C++Y +CEPC MC  A+ +  +K + YG
Subjt:  TRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYG

AT5G28050.2 Cytidine/deoxycytidylate deaminase family protein9.8e-0440Show/hide
Query:  TRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYG
        T HAE+ AI    EA K+  L+  E+    S+C++Y +CEPC MC  A+ +  +K + YG
Subjt:  TRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTACCCGACATGCGGAGATGGAAGCTATTGACATTTTGATTGAGGCATGGAAGAGGGATGGGCTTTCAACCTCAGAAGTTGCCGACAAGTTCTCGAAGTGCAAGCTTTA
TGTTACCTGTGAACCGTGCATTATGTGCGCTTCAGCCCTATCAATACTTGGTATAAAGGAAGTATATTATGGTTGTGCAAATGATAAATTTGGTGGATGTGGATCTATAT
TGTCACTTCACTTGGGTAGCTGCGAGGCACATACAAGTGGCAATCGGCAAGGAAGGGGGTTCAAATGCACTGCAGGAACAATGGCGTCAGAAGCAGTGGCTCTTTTTCGA
AGTTTTTACGAACAGGGGAATCCTAATGCTCCAAAACCTCACAGGCCACTAGTTCACCATCAA
mRNA sequenceShow/hide mRNA sequence
GCTACCCGACATGCGGAGATGGAAGCTATTGACATTTTGATTGAGGCATGGAAGAGGGATGGGCTTTCAACCTCAGAAGTTGCCGACAAGTTCTCGAAGTGCAAGCTTTA
TGTTACCTGTGAACCGTGCATTATGTGCGCTTCAGCCCTATCAATACTTGGTATAAAGGAAGTATATTATGGTTGTGCAAATGATAAATTTGGTGGATGTGGATCTATAT
TGTCACTTCACTTGGGTAGCTGCGAGGCACATACAAGTGGCAATCGGCAAGGAAGGGGGTTCAAATGCACTGCAGGAACAATGGCGTCAGAAGCAGTGGCTCTTTTTCGA
AGTTTTTACGAACAGGGGAATCCTAATGCTCCAAAACCTCACAGGCCACTAGTTCACCATCAA
Protein sequenceShow/hide protein sequence
ATRHAEMEAIDILIEAWKRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSCEAHTSGNRQGRGFKCTAGTMASEAVALFR
SFYEQGNPNAPKPHRPLVHHQ