; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0429 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0429
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationMC06:3532218..3537843
RNA-Seq ExpressionMC06g0429
SyntenyMC06g0429
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]1.63e-17790.65Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEIT+HFIE IYVHFYNTRLRKQ SS MTT+PQMTNLSN+P+KGYQA  +N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QY+GQ GG D WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_022135425.1 replication protein A 32 kDa subunit B isoform X1 [Momordica charantia]1.14e-200100Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI
        MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI

Query:  DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN
        DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN
Subjt:  DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_022922072.1 replication protein A 32 kDa subunit B-like isoform X2 [Cucurbita moschata]2.23e-17789.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEITSHFIE IYVHFYNTRLR+Q SSMT +PQM NLSN+P++GYQ   SNQ
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ

Query:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        Y+GQ GG D WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_023516913.1 replication protein A 32 kDa subunit B-like isoform X2 [Cucurbita pepo subsp. pepo]1.57e-17789.89Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEITSHFIE IYVHFYNTRLR+Q SSMT +PQM NLSN+P++GYQ   SNQ
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ

Query:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        YSGQ GG D WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+L VP+EKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

XP_038880298.1 replication protein A 32 kDa subunit B [Benincasa hispida]2.23e-17790.61Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTG ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEITSHFIE IYVHFYNTRLRKQ  S  T+PQM NLSN+PMKGYQA  SNQ
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ

Query:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        Y+GQ GG D WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like7.89e-17890.65Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEIT+HFIE IYVHFYNTRLRKQ SS MTT+PQMTNLSN+P+KGYQA  +N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QY+GQ GG D WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like7.89e-17890.65Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHS SPAKNRDVQALLPLTVKQINDAFLS+DDKS+FVI+GVDVNNVKLVGMV NRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEIT+HFIE IYVHFYNTRLRKQ SS MTT+PQMTNLSN+P+KGYQA  +N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QY+GQ GG D WKSLEQMVLDFLQLPSCD+ERGAHRDVIAQ L VP+EKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1C122 replication protein A 32 kDa subunit B isoform X15.54e-201100Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI
        MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRI

Query:  DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN
        DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN
Subjt:  DCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X21.08e-17789.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEITSHFIE IYVHFYNTRLR+Q SSMT +PQM NLSN+P++GYQ   SNQ
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQ

Query:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        Y+GQ GG D WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X11.31e-17689.57Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHSLSPAKNRDVQALLPLTVKQINDAFLS+DDKS+FV++GVDVNNVKLVGMV NRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGK TLNVFSIR VTDYNEITSHFIE IYVHFYNTRLRKQ SS MT +PQM NLSN+P++GYQ   SN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSS-MTTRPQMTNLSNSPMKGYQAASSN

Query:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
        QY+GQ GG D WK+LEQMVLDFLQLPSCDTERGAHRDVIAQ+LNVP+EKL+PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

SwissProt top hitse value%identityAlignment
Q6H7J5 Replication protein A 32 kDa subunit B1.4e-4937.85Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSLSPA----KNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD
        G  +DG     ++ F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  +NDDKS+F +NG++V+ V+LVG + N+  R+TDV+F LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSLSPA----KNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQ-HSSMTTRPQMTNLSNSPMKG
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK FQGK  +  +S+R +T++N++T HF+ C++VH   TR + Q +++  T      +    M  
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQ-HSSMTTRPQMTNLSNSPMKG

Query:  YQAASSNQ---YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
         Q+  +NQ   +S     G     ++ ++  F      + + G   D +++ LN+P E +   + +  + G +Y+T DD+H+KST NG
Subjt:  YQAASSNQ---YSGQVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A4.9e-4238.52Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDA---FLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGT
        MM  SQ D   AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV++GV+  NV+LVG+VS +  R TDV+F +DDGT
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDA---FLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGT

Query:  GRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSN--SPMKGYQ
        GR+D  +WVN+ ADS E   + +GMYV V G LK  Q +     F+IR VTDYNE+T HFI+C+ +H  NT+ +    + T     ++ SN  S M    
Subjt:  GRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSN--SPMKGYQ

Query:  AASSNQYSG-QVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
        +  SN      V  G +     +++  F +  + ++E G H D I +   +P  K+  A+  L + G IYST D+ H+KS  N
Subjt:  AASSNQYSG-QVGGGDRWKSLEQMVLDFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B8.9e-6849.11Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S    RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMTTRPQMT-NLSNSPMKGYQAA
        C +W +   ++ E+E +  GMYVR+HGHLK FQGK ++NVFS+R VTD+NEI  HF EC+YVH YNT+LR       + T RPQM  +   +P K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMTTRPQMT-NLSNSPMKGYQAA

Query:  SSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L +P+ ++  A++ L  +G IYST D+  FKSTAN
Subjt:  SSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

Q92373 Replication factor A protein 21.8e-2331.62Show/hide
Query:  YGSQFDGNAAFS-----GGGFMPSQTTQAPDHSLSPAKNRDVQA---LLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD
        YG  F  N+AFS     G GF         D S  P+ +R   A   L P+T+KQI +A   + D + F I+GV+V  V  VG++ N   + T+ T+ ++
Subjt:  YGSQFDGNAAFS-----GGGFMPSQTTQAPDHSLSPAKNRDVQA---LLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGY
        DGTG I+   W +  A S     +    YVRV+G++K F GK  +    IR++ D+NE+  HF+E I VH +           T +    N +N+P  GY
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGY

Query:  QAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-----------SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKS
          +++  Y+  +       SLEQ + ++   P           + +T  G H   +AQ++  P   L      L++EG+IY+T D+ HFKS
Subjt:  QAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-----------SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKS

Q9ZQ19 Replication protein A 32 kDa subunit A5.8e-6747.27Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L VFS+R + D+NE+T H+IECI+ +  N+  ++Q     T+   T              +
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS

Query:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK
           S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+YHFK
Subjt:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK

Arabidopsis top hitse value%identityAlignment
AT1G07130.1 Nucleic acid-binding, OB-fold-like protein8.4e-0524.26Show/hide
Query:  LTVKQINDAFLSNDDKSSF-VINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR
        L  + I     S  + +SF ++ G  V+ V++VG + +R      + F +DDGTG + C  W+N+   S                   +   I  G   R
Subjt:  LTVKQINDAFLSNDDKSSF-VINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR

Query:  VHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECI
        V G + S++G   +      +  D N    H++EC+
Subjt:  VHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECI

AT2G24490.1 replicon protein A24.1e-6847.27Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L VFS+R + D+NE+T H+IECI+ +  N+  ++Q     T+   T              +
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS

Query:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK
           S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+YHFK
Subjt:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK

AT2G24490.2 replicon protein A24.1e-6847.27Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F S+ +KS  VING+ + NV LVG+V ++   ++T+V F LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNR-AGRITDVTFALDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGKT L VFS+R + D+NE+T H+IECI+ +  N+  ++Q     T+   T              +
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASS

Query:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK
           S Q   G+  K+L+ M+LD+L+ P+C   ++G H D IAQ L +P  KL   +++LE +GLIYST D+YHFK
Subjt:  NQYSGQVGGGDRWKSLEQMVLDFLQLPSCDT-ERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFK

AT3G02920.1 Replication protein A, subunit RPA326.3e-6949.11Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S    RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMTTRPQMT-NLSNSPMKGYQAA
        C +W +   ++ E+E +  GMYVR+HGHLK FQGK ++NVFS+R VTD+NEI  HF EC+YVH YNT+LR       + T RPQM  +   +P K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMTTRPQMT-NLSNSPMKGYQAA

Query:  SSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN
         SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L +P+ ++  A++ L  +G IYST D+  FKSTAN
Subjt:  SSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA328.6e-6647.18Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHS---------------LSPAK----NRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSN
        MYG  FDGNAAF+GGGFMPSQ TTQA + S               +S AK    NRDV+ LLPLT+KQ++ A  S   +S+F I+GVD+  V +VG +S 
Subjt:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHS---------------LSPAK----NRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGK ++NVFS+R VTD+NEI  HF EC+YVH YNT+LR       + T
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRK---QHSSMT

Query:  TRPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTA
         RPQM  +   +P K YQ   SNQ+  Q    D    ++Q VL++L  P    +E G H D+IA+ L +P+ ++  A++ L  +G IYST D+  FKSTA
Subjt:  TRPQMT-NLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVLDFLQLP-SCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTA

Query:  N
        N
Subjt:  N


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTATCTCCGGCGAAAAATAG
AGATGTCCAAGCGTTGCTTCCATTAACGGTGAAGCAGATAAATGATGCATTCCTGTCTAATGATGATAAATCAAGCTTTGTCATTAATGGTGTTGATGTTAATAATGTTA
AGCTTGTAGGGATGGTGAGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACAGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCAGCA
GATTCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTTCGGGTCCATGGCCACTTGAAAAGCTTTCAGGGTAAAACAACTTTAAATGTCTTTTCTATCAGGTCTGT
TACCGACTATAATGAGATCACAAGTCACTTCATAGAATGCATATATGTTCATTTCTACAACACCAGGTTACGGAAACAACATAGTAGTATGACTACTCGGCCACAAATGA
CAAATTTATCTAATTCGCCTATGAAAGGATATCAAGCTGCCTCTTCAAATCAATACTCTGGTCAAGTAGGAGGTGGTGATCGTTGGAAAAGCCTTGAGCAGATGGTCTTA
GATTTTTTGCAACTTCCTTCATGCGATACTGAGAGGGGGGCACACCGTGATGTCATTGCACAAAATCTCAATGTTCCAATGGAAAAGCTCATCCCAGCAATGAAAAATCT
TGAAGAGGAAGGCCTAATCTACTCAACAACTGATGATTACCACTTCAAATCAACTGCCAATGGTTGA
mRNA sequenceShow/hide mRNA sequence
CGGGAGGGAAGCTGAACTGGTATTTCTAGGTTTTAACAGAAGAAAATTTCATTCCGAAGACTGCACTTCAGTTCGCTCTCGATCAGTCATTTGATGCTCTTATAGTGGAA
GAATGATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTATCTCCGGCGAAAAAT
AGAGATGTCCAAGCGTTGCTTCCATTAACGGTGAAGCAGATAAATGATGCATTCCTGTCTAATGATGATAAATCAAGCTTTGTCATTAATGGTGTTGATGTTAATAATGT
TAAGCTTGTAGGGATGGTGAGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACAGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCAG
CAGATTCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTTCGGGTCCATGGCCACTTGAAAAGCTTTCAGGGTAAAACAACTTTAAATGTCTTTTCTATCAGGTCT
GTTACCGACTATAATGAGATCACAAGTCACTTCATAGAATGCATATATGTTCATTTCTACAACACCAGGTTACGGAAACAACATAGTAGTATGACTACTCGGCCACAAAT
GACAAATTTATCTAATTCGCCTATGAAAGGATATCAAGCTGCCTCTTCAAATCAATACTCTGGTCAAGTAGGAGGTGGTGATCGTTGGAAAAGCCTTGAGCAGATGGTCT
TAGATTTTTTGCAACTTCCTTCATGCGATACTGAGAGGGGGGCACACCGTGATGTCATTGCACAAAATCTCAATGTTCCAATGGAAAAGCTCATCCCAGCAATGAAAAAT
CTTGAAGAGGAAGGCCTAATCTACTCAACAACTGATGATTACCACTTCAAATCAACTGCCAATGGTTGACGTCTCTATTATGTTTGTAACTAATGAATTCAAGGCAAGTT
TAATTCCTGCCGTCCTTTTCATATGGTTTAAGTTGGGAAAATCTTTGTAGTCAAAATATGATCCGTCTGTTTTAGCCTTTACTATGTGACCTGCCAAGCGAACAGAGGAA
AAAAAGGAGAGAACAAATGGTCCCACGGCTATGGCTTGTTAAAACTATTATAATGACATTTGTTTCTATTGTGCAACATTTTTTAAACGAACTAATATAATGCTCAGCAC
AGATGCAGCCTACAGAGGTGATTTTGGCTGATTCTCAGGATCTTATGTTTCAGGTTCACATTACTAATAATGAAAAGGGGAATCAGAAAGCAAATTCAAACAAAG
Protein sequenceShow/hide protein sequence
MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSLSPAKNRDVQALLPLTVKQINDAFLSNDDKSSFVINGVDVNNVKLVGMVSNRAGRITDVTFALDDGTGRIDCSKWVNEAA
DSNEVEGILDGMYVRVHGHLKSFQGKTTLNVFSIRSVTDYNEITSHFIECIYVHFYNTRLRKQHSSMTTRPQMTNLSNSPMKGYQAASSNQYSGQVGGGDRWKSLEQMVL
DFLQLPSCDTERGAHRDVIAQNLNVPMEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG