; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0430 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0430
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReplication protein A 32 kDa subunit B
Genome locationMC06:3540887..3541438
RNA-Seq ExpressionMC06g0430
SyntenyMC06g0430
Gene Ontology termsNA
InterPro domainsIPR007789 - Protein of unknown function DUF688


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058272.1 hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa]3.14e-5664.25Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +  PPA  LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KKNGA  SSS  RR VDRES+   +KSNDES +SS   CISYSLSS+SSSASS+     RRRSKLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]8.94e-4762.3Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAP-SAEHLHVVPKPPQQQQEPVRVWFWKKP
        LSE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK   P +NL      PPP+P S +     P    +QQE  ++WFW KP
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAP-SAEHLHVVPKPPQQQQEPVRVWFWKKP

Query:  KRKAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS-SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVR
         RK +R+    V KKNGAF   SSSRR V++ES +  +KSNDESS+S SCIS+SLSSSSSS  SNGY RRRSKL  LAKGF+R
Subjt:  KRKAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS-SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVR

KGN65459.1 hypothetical protein Csa_020126 [Cucumis sativus]4.31e-5663.02Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N++FV+KILSRNSSFGRSARL AC LPGQVPFNWE QPGLPK Q  D   PP + LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KK+GA  SSS RR VDR+S+   KKSNDESS+SS   CISYS+SS+SSSASS+     RRR KLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

TYK11824.1 hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa]2.55e-5563.73Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +  PPA  LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KKNGA  SSS  RR VDRES+   +KSND    SS+ SCISYSLSS+SSSASS+     RRRSKLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

XP_022987494.1 uncharacterized protein LOC111485037 [Cucurbita maxima]7.46e-5160.32Show/hide
Query:  SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKR
        SE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK   P +NL P    PPP    +     P    +QQE  ++W W KP R
Subjt:  SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKR

Query:  KAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF
        K +R+    V KKNGAF   SSSR  V++ES + C+KSNDESS+S      SCIS+SLSSSSSS  SNGY RRRSKL  LAKGF+RWAF
Subjt:  KAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF

TrEMBL top hitse value%identityAlignment
A0A0A0LWV3 Uncharacterized protein2.09e-5663.02Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N++FV+KILSRNSSFGRSARL AC LPGQVPFNWE QPGLPK Q  D   PP + LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KK+GA  SSS RR VDR+S+   KKSNDESS+SS   CISYS+SS+SSSASS+     RRR KLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

A0A5A7UQX0 Uncharacterized protein1.52e-5664.25Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +  PPA  LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KKNGA  SSS  RR VDRES+   +KSNDES +SS   CISYSLSS+SSSASS+     RRRSKLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

A0A5D3CKX4 Uncharacterized protein1.23e-5563.73Show/hide
Query:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW
        LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +  PPA  LPPP+ SA  L    HVVPK     Q PV++WFW
Subjt:  LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFW

Query:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF
         K +RK+ R       KKNGA  SSS  RR VDRES+   +KSND    SS+ SCISYSLSS+SSSASS+     RRRSKLG LAK F+RWAF
Subjt:  KKPKRKAVRHNNNAVPKKNGAFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSKLGRLAKGFVRWAF

A0A6J1JJ17 uncharacterized protein LOC1114850373.61e-5160.32Show/hide
Query:  SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKR
        SE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK   P +NL P    PPP    +     P    +QQE  ++W W KP R
Subjt:  SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKR

Query:  KAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF
        K +R+    V KKNGAF   SSSR  V++ES + C+KSNDESS+S      SCIS+SLSSSSSS  SNGY RRRSKL  LAKGF+RWAF
Subjt:  KAVRHNNNAVPKKNGAF--DSSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF

A0A6J5TFB4 Uncharacterized protein4.64e-2140.95Show/hide
Query:  KPISLLQENEIFVNKILSRNSSFGRSA-RLAACRLPGQVPFNWETQPGLPKLQTPD------QNL-----PPAIALPPPAPSAEHLHVVPKPPQQQQEPV
        K +++   NE+F NKILSRNSS G S+ R    R+ G VPF WE +PG PKL+  D      QN      PP I  PPPA  + +++ +P          
Subjt:  KPISLLQENEIFVNKILSRNSSFGRSA-RLAACRLPGQVPFNWETQPGLPKLQTPD------QNL-----PPAIALPPPAPSAEHLHVVPKPPQQQQEPV

Query:  RVWFWKKPK------RKAVRHNNNAVPKKNGAFDSSSRRRVDRESDQLCKKSND-------ESSTSSCISYSLSS------SSSSASSNGYGRRRSKLGR
        RVW WKK K      RK  + N N V    G FD +   ++  ++D LCK   +        SSTSSC S SLSS      SSSS+S++    R SK+ R
Subjt:  RVWFWKKPK------RKAVRHNNNAVPKKNGAFDSSSRRRVDRESDQLCKKSND-------ESSTSSCISYSLSS------SSSSASSNGYGRRRSKLGR

Query:  LAKGFVRWAF
        LA+GF+RWAF
Subjt:  LAKGFVRWAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTCTGTCTGAGAAACCCATCTCCTTACTCCAAGAAAATGAAATTTTCGTCAACAAAATTCTCTCCAGAAACTCCTCCTTCGGCCGCTCTGCCCGTCTCGCCGCCTG
CCGCCTGCCCGGCCAAGTCCCCTTCAACTGGGAGACACAGCCCGGACTGCCCAAACTCCAAACCCCAGATCAAAATCTCCCGCCGGCGATCGCCCTCCCGCCGCCGGCGC
CCTCCGCCGAGCACCTCCACGTAGTCCCCAAGCCGCCGCAGCAGCAGCAGGAGCCGGTTCGGGTTTGGTTCTGGAAGAAACCGAAGAGAAAGGCCGTGAGGCATAACAAT
AACGCCGTCCCCAAGAAAAACGGTGCGTTCGACTCATCGTCCAGACGACGAGTCGATCGCGAGAGTGATCAGTTATGTAAAAAATCAAACGACGAGTCGTCCACATCGTC
TTGCATTTCTTACTCTTTATCCTCCAGCTCTTCTTCGGCCTCCTCTAATGGTTATGGCCGACGCCGCTCCAAACTCGGCCGCCTCGCCAAGGGCTTCGTAAGGTGGGCCT
TC
mRNA sequenceShow/hide mRNA sequence
CTTCTTCTGTCTGAGAAACCCATCTCCTTACTCCAAGAAAATGAAATTTTCGTCAACAAAATTCTCTCCAGAAACTCCTCCTTCGGCCGCTCTGCCCGTCTCGCCGCCTG
CCGCCTGCCCGGCCAAGTCCCCTTCAACTGGGAGACACAGCCCGGACTGCCCAAACTCCAAACCCCAGATCAAAATCTCCCGCCGGCGATCGCCCTCCCGCCGCCGGCGC
CCTCCGCCGAGCACCTCCACGTAGTCCCCAAGCCGCCGCAGCAGCAGCAGGAGCCGGTTCGGGTTTGGTTCTGGAAGAAACCGAAGAGAAAGGCCGTGAGGCATAACAAT
AACGCCGTCCCCAAGAAAAACGGTGCGTTCGACTCATCGTCCAGACGACGAGTCGATCGCGAGAGTGATCAGTTATGTAAAAAATCAAACGACGAGTCGTCCACATCGTC
TTGCATTTCTTACTCTTTATCCTCCAGCTCTTCTTCGGCCTCCTCTAATGGTTATGGCCGACGCCGCTCCAAACTCGGCCGCCTCGCCAAGGGCTTCGTAAGGTGGGCCT
TC
Protein sequenceShow/hide protein sequence
LLLSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKRKAVRHNN
NAVPKKNGAFDSSSRRRVDRESDQLCKKSNDESSTSSCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF