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MC06g0442 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0442
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionC2H2-like zinc finger protein
Genome locationMC06:3635630..3635950
RNA-Seq ExpressionMC06g0442
SyntenyMC06g0442
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0060862 - negative regulation of floral organ abscission (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589714.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.41e-3369.81Show/hide
Query:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH
        H QLNLELVLEPSS S  SS+ V      +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM +S H
Subjt:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH

Query:  LWKIET
        LWK+ET
Subjt:  LWKIET

XP_022134801.1 protein LATE FLOWERING [Momordica charantia]1.15e-71100Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
        KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN

Query:  HLWKIET
        HLWKIET
Subjt:  HLWKIET

XP_022921390.1 zinc finger protein 7 [Cucurbita moschata]1.41e-3369.81Show/hide
Query:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH
        H QLNLELVLEPSS S  SS+ V      +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM +S H
Subjt:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH

Query:  LWKIET
        LWK+ET
Subjt:  LWKIET

XP_022987492.1 zinc finger protein 7-like [Cucurbita maxima]1.41e-3369.81Show/hide
Query:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH
        H QLNLELVLEPSS S  SS+ V      +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM +S H
Subjt:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH

Query:  LWKIET
        LWK+ET
Subjt:  LWKIET

XP_038880343.1 zinc finger protein 3 [Benincasa hispida]6.23e-3466.36Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
        +H QLNLEL+LEPSS   SSSSA       +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIR  AY GD     N+ M  ++S+
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN

Query:  HLWKIET
        +LW +ET
Subjt:  HLWKIET

TrEMBL top hitse value%identityAlignment
A0A384LC37 (thale cress) hypothetical protein1.35e-2572.73Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI
        K+ QLNLELVLEPSS S SSSS+ +     + +C + Q RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI

A0A6J1BYT1 protein LATE FLOWERING5.55e-72100Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
        KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN

Query:  HLWKIET
        HLWKIET
Subjt:  HLWKIET

A0A6J1E5I0 zinc finger protein 76.81e-3469.81Show/hide
Query:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH
        H QLNLELVLEPSS S  SS+ V      +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM +S H
Subjt:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH

Query:  LWKIET
        LWK+ET
Subjt:  LWKIET

A0A6J1JAI3 zinc finger protein 7-like6.81e-3469.81Show/hide
Query:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH
        H QLNLELVLEPSS S  SS+ V      +PNC+   ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM +S H
Subjt:  HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNH

Query:  LWKIET
        LWK+ET
Subjt:  LWKIET

A0A6J1KNT5 zinc finger protein 2-like8.29e-3162.62Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN
        KH QLNL L LEPSS S SS SA        P     + RV+ CNYC+RKFYSSQALGGHQNAHKLERTLAKK+REIR  AY GD   N+ MN     S 
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSN

Query:  HLWKIET
        HLWK+ET
Subjt:  HLWKIET

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 24.1e-2172.73Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI
        K+ QLNLELVLEPSS S SSSS+      ++ +C  +Q RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI

Q39262 Zinc finger protein 35.0e-1165.22Show/hide
Query:  QARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYA
        + ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + +   A A
Subjt:  QARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYA

Q39263 Zinc finger protein 41.3e-1156.76Show/hide
Query:  NLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQ-----ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        N  L LE SS +   SS  +    S P     Q      RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Subjt:  NLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQ-----ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

Q39266 Zinc finger protein 71.7e-1185.71Show/hide
Query:  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++
Subjt:  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

Q42485 Zinc finger protein 11.3e-1157.53Show/hide
Query:  SQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        S+LNL       S+  SSSS   H        D    RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  SQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.2e-1285.71Show/hide
Query:  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++
Subjt:  RVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

AT1G66140.1 zinc finger protein 49.4e-1356.76Show/hide
Query:  NLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQ-----ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS
        N  L LE SS +   SS  +    S P     Q      RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Subjt:  NLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQ-----ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS

AT1G80730.1 zinc-finger protein 19.4e-1357.53Show/hide
Query:  SQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR
        S+LNL       S+  SSSS   H        D    RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK+ +
Subjt:  SQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSR

AT5G25160.1 zinc finger protein 33.6e-1265.22Show/hide
Query:  QARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYA
        + ++FSCNYC+R FYSSQALGGHQNAHK ERTLAK+ + +   A A
Subjt:  QARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYA

AT5G57520.1 zinc finger protein 22.9e-2272.73Show/hide
Query:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI
        K+ QLNLELVLEPSS S SSSS+      ++ +C  +Q RVFSCNYC+RKFYSSQALGGHQNAHKLERTLAKKSRE+
Subjt:  KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAACACAGCCAACTGAACCTGGAGCTGGTTCTAGAACCCTCTTCATATTCATATTCCTCGTCGTCTGCCGTTGATCATGTGATTGGGAGCACTCCAAATTGTGATGATGA
TCAGGCGAGGGTGTTCTCATGCAACTATTGCAAGAGAAAATTTTACAGCTCGCAGGCGTTGGGTGGCCACCAAAATGCGCATAAGCTGGAGAGGACTCTAGCCAAGAAGA
GCAGAGAGATTAGAGGAGGAGCATACGCTGGAGATGAGAGCTGCAACATGAACATGAACATGATGATGAACAATTCGAACCATCTTTGGAAAATTGAGACG
mRNA sequenceShow/hide mRNA sequence
AAACACAGCCAACTGAACCTGGAGCTGGTTCTAGAACCCTCTTCATATTCATATTCCTCGTCGTCTGCCGTTGATCATGTGATTGGGAGCACTCCAAATTGTGATGATGA
TCAGGCGAGGGTGTTCTCATGCAACTATTGCAAGAGAAAATTTTACAGCTCGCAGGCGTTGGGTGGCCACCAAAATGCGCATAAGCTGGAGAGGACTCTAGCCAAGAAGA
GCAGAGAGATTAGAGGAGGAGCATACGCTGGAGATGAGAGCTGCAACATGAACATGAACATGATGATGAACAATTCGAACCATCTTTGGAAAATTGAGACG
Protein sequenceShow/hide protein sequence
KHSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNHLWKIET