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MC06g0481 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0481
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationMC06:3956185..3956613
RNA-Seq ExpressionMC06g0481
SyntenyMC06g0481
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589746.1 hypothetical protein SDJN03_15169, partial [Cucurbita argyrosperma subsp. sororia]6.60e-4579.87Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
        M SIRAIA +CFVVC  AIESQ RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSG+G+GSGSGSGSGSYSSS   SSSSSYGGSGAGSEAGSYAGS AG
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG

Query:  S--GSGSGRNYRNGGSG----SGSGYGEGSGRGNGEGYGEGHGYGEGRG
        S  GS SGRNYRNGGSG    SG GYG G G G GEGYGEG GYGEG G
Subjt:  S--GSGSGRNYRNGGSG----SGSGYGEGSGRGNGEGYGEGHGYGEGRG

XP_011656027.1 glycine-rich protein DOT1 [Cucumis sativus]3.28e-4076.06Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQA-RVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRA
        MASI+AIA +C V+C   IES+A RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS A
Subjt:  MASIRAIAFVCFVVCFCAIESQA-RVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRA

Query:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEG
        GS +GSG   RNG SG           G G GYGEGHGYGEG
Subjt:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEG

XP_022135257.1 glycine-rich cell wall structural protein 2-like [Momordica charantia]2.44e-69100Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
        MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG

Query:  SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
        SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
Subjt:  SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG

XP_022921885.1 glycine-rich protein DOT1-like [Cucurbita moschata]3.71e-4079.14Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSS--SSHSSSSSYGGSGAGSEAGSYAGSR
        M SIRAIA +CFVVC  AIESQ RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSG+G+GSGSGSGSGS S S  SS SSSSSYGGSGAGSEAGSYAGS 
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSS--SSHSSSSSYGGSGAGSEAGSYAGSR

Query:  AGS--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG
        AGS  GS SGRNYRNGGSG    YGEG G G G GYGEG
Subjt:  AGS--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG

XP_023515820.1 putative glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]1.20e-4379.31Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
        M SIR+IA +CFVVC  AIESQ RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSG+G+GSGSGSGSGSYSSS   SSSSSYGGSGAGSEAGSYAGS AG
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG

Query:  S--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
        S  GS SGRNYRNGGSG    YG G G G GEGYGEG GYGEG G
Subjt:  S--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG

TrEMBL top hitse value%identityAlignment
A0A0A0LW94 Uncharacterized protein1.59e-4076.06Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQA-RVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRA
        MASI+AIA +C V+C   IES+A RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS A
Subjt:  MASIRAIAFVCFVVCFCAIESQA-RVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRA

Query:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEG
        GS +GSG   RNG SG           G G GYGEGHGYGEG
Subjt:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEG

A0A6J1C269 glycine-rich cell wall structural protein 2-like1.18e-69100Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
        MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAG

Query:  SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
        SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
Subjt:  SGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG

A0A6J1E2L1 cell wall protein IFF6-like isoform X12.44e-3770.3Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRA
        MASI ++  VCF++ F  I SQARVARKDLGLDLGGLG+G+G GIGLG+GG SGSG+G+GSGSGSGSGS SSSSS S SSS G GSGAGSEAGSYAGSRA
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRA

Query:  GSGSGSGRNY-----------------RNGGSGSGSGYGEGSGRGNG----EGYGEGHGYGEGRG
        GSGSGSG                    RNGGSGSGSGYG GSGRG+G    EGYGEGHGYGEGRG
Subjt:  GSGSGSGRNY-----------------RNGGSGSGSGYGEGSGRGNG----EGYGEGHGYGEGRG

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X38.25e-3977.03Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRA
        MASI ++  VCF++ F  I SQARVARKDLGLDLGGLG+G+G GIGLG+GG SGSG+G+GSGSGSGSGS SSSSS S SSS G GSGAGSEAGSYAGSRA
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRA

Query:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNG----EGYGEGHGYGEGRG
        GSGSG     RNGGSGSGSGYG GSGRG+G    EGYGEGHGYGEGRG
Subjt:  GSGSGSGRNYRNGGSGSGSGYGEGSGRGNG----EGYGEGHGYGEGRG

A0A6J1E720 glycine-rich protein DOT1-like1.79e-4079.14Show/hide
Query:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSS--SSHSSSSSYGGSGAGSEAGSYAGSR
        M SIRAIA +CFVVC  AIESQ RVARKDLGLDLGGLG+GLG G+GLG+GGGSGSG+G+GSGSGSGSGS S S  SS SSSSSYGGSGAGSEAGSYAGS 
Subjt:  MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSS--SSHSSSSSYGGSGAGSEAGSYAGSR

Query:  AGS--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG
        AGS  GS SGRNYRNGGSG    YGEG G G G GYGEG
Subjt:  AGS--GSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG

SwissProt top hitse value%identityAlignment
P05790 Fibroin heavy chain2.1e-0454.63Show/hide
Query:  GLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAGSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG
        G G G G+G G G G G+GSGAGAGSG+G+GSG+ S S + + S +  GSGAG+ +G+ AGS AG+GSG+G  Y   G+G+G+GYG G G G G GYG G
Subjt:  GLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAGSGSGSGRNYRNGGSGSGSGYGEGSGRGNGEGYGEG

Query:  HGYGEGRG
         G G G G
Subjt:  HGYGEGRG

Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein1.9e-1671.28Show/hide
Query:  VVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRAGSGSGS
        V+    + +++R+ARKDLG+DLGG+GIGLG G+G+G+GGGSGSGAGAGSGSGSGS S SSSSS SSSSS G G  AGS AGS+AGSRAGSGSG+
Subjt:  VVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYG-GSGAGSEAGSYAGSRAGSGSGS

AT4G30460.1 glycine-rich protein4.0e-1961.59Show/hide
Query:  AIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSG--AGSEAGSYAGSRAGSG-
        ++  +  ++    + S++RVARKDLGLDLGG+G G+G GIG+G GGGSGSGAGAGSGSG G  S SSSSS SSSSS GG G  AGSEAGSYAGS AGSG 
Subjt:  AIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSG--AGSEAGSYAGSRAGSG-

Query:  ---SGSGRNY-------RNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG
           SGSGR           GG G G G G G G GNGEGYGEG GYG G G
Subjt:  ---SGSGRNY-------RNGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCATCAGGGCAATTGCTTTTGTTTGTTTCGTAGTCTGTTTCTGTGCGATTGAATCACAAGCACGAGTGGCGAGGAAGGACCTGGGCCTTGACCTTGGAGGCTT
GGGAATTGGGCTCGGGGCAGGAATCGGGTTGGGGATAGGCGGAGGCAGTGGCTCGGGTGCTGGAGCCGGGTCTGGATCCGGGTCCGGGTCGGGTTCGTATTCATCCTCGT
CATCACACTCGTCAAGCTCTAGCTACGGTGGCTCGGGTGCAGGCTCGGAAGCTGGTTCCTACGCAGGGTCACGTGCAGGGTCGGGTTCGGGTTCGGGAAGAAATTACAGG
AACGGTGGATCGGGATCTGGGTCGGGCTATGGCGAGGGTTCCGGTAGAGGAAACGGTGAAGGTTATGGTGAGGGTCATGGCTATGGCGAGGGACGTGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCATCAGGGCAATTGCTTTTGTTTGTTTCGTAGTCTGTTTCTGTGCGATTGAATCACAAGCACGAGTGGCGAGGAAGGACCTGGGCCTTGACCTTGGAGGCTT
GGGAATTGGGCTCGGGGCAGGAATCGGGTTGGGGATAGGCGGAGGCAGTGGCTCGGGTGCTGGAGCCGGGTCTGGATCCGGGTCCGGGTCGGGTTCGTATTCATCCTCGT
CATCACACTCGTCAAGCTCTAGCTACGGTGGCTCGGGTGCAGGCTCGGAAGCTGGTTCCTACGCAGGGTCACGTGCAGGGTCGGGTTCGGGTTCGGGAAGAAATTACAGG
AACGGTGGATCGGGATCTGGGTCGGGCTATGGCGAGGGTTCCGGTAGAGGAAACGGTGAAGGTTATGGTGAGGGTCATGGCTATGGCGAGGGACGTGGT
Protein sequenceShow/hide protein sequence
MASIRAIAFVCFVVCFCAIESQARVARKDLGLDLGGLGIGLGAGIGLGIGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSRAGSGSGSGRNYR
NGGSGSGSGYGEGSGRGNGEGYGEGHGYGEGRG