; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0507 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0507
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUBP1-associated proteins 1C-like isoform X3
Genome locationMC06:4176910..4178159
RNA-Seq ExpressionMC06g0507
SyntenyMC06g0507
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7838133.1 UBP1-associated proteins 1C-like isoform X2 [Senna tora]2.47e-1130.16Show/hide
Query:  EMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQ-----FSMKSS--------GQRMLNQSNS-------SPLRFLEPP---------KEATNDEEKD
        E++ RR +E E+RRE+++E+E+A+ R  E  L  E+     FS + +        G R L + N+         +  + PP         K       KD
Subjt:  EMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQ-----FSMKSS--------GQRMLNQSNS-------SPLRFLEPP---------KEATNDEEKD

Query:  KPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE
        K I+L +P+P  +EAKRKA  PP      AV  E + P G ++ K K++    + C  C+++ + +  F+ HL+GKKH+AK  A +  ++KI +    E 
Subjt:  KPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE

Query:  EEEEELEEIKPGPEI--------------ENKGFFKFWCEIYQIGTQSMIVM
          EE L +  P                  + K  FKFWCE  Q+G  +  VM
Subjt:  EEEEELEEIKPGPEI--------------ENKGFFKFWCEIYQIGTQSMIVM

KAF9852912.1 hypothetical protein H0E87_016631 [Populus deltoides]2.80e-1126.05Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN
        R++EEI  +EMAWRR++E E+RRE+++E+E+A +R       +E+ +M+   ++ L      NQ + S            + ++ PP         + + 
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN

Query:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------
        +  KDK I+L +P+P    AKRKA+ P  E   E        PF  I KK K++    + C  C+++ +S+   + HL+G++H+AK              
Subjt:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------

Query:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI
              E +K    K+T+                                        V+ E++ ++LE++              PEI+ K  FKFWCE+
Subjt:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI

Query:  YQIGTQSMIVM
         QIG  S +VM
Subjt:  YQIGTQSMIVM

XP_008443847.1 PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo]1.81e-1935.8Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL
        R+KEEI +RE+  RR +E EIRRE+++E+ELAI RA  +T      D QF ++   +   R+L+ S+S+ L  +     + N +E+ KP        I L
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL

Query:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE
         RP+P +F  KRKA+     A A   G E        P  WI  K    EE  F C  C +  +S+ SF+AH+ GKKH+AK E  ++V +     P + E
Subjt:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE

Query:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM
        E+ +E     ++ I   P +E     KF CEI  +G   M VM
Subjt:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM

XP_024459786.1 uncharacterized protein LOC18109302 [Populus trichocarpa]2.06e-1126.05Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN
        R++EEI  +EMAWRR++E E+RRE+++E+E+A +R       +E+ +M+   ++ L      NQ + S            + ++ PP         + + 
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN

Query:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------
        +  KDK I+L +P+P    AKRKA+ P  E+  E        PF  I KK K++    + C  C+++ +S+   + HL+G++H+AK              
Subjt:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------

Query:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI
              E +K    K+T+                                        V+ E++ ++LE++              PEI+ K  FKFWCE+
Subjt:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI

Query:  YQIGTQSMIVM
         QIG  S +VM
Subjt:  YQIGTQSMIVM

XP_038880353.1 zinc finger protein 385B [Benincasa hispida]2.06e-3140Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERT---LDDEQFSMKSSGQRMLNQ--------------SNSSPLRFLEPPKEATN-----DEE
        R+K+EI IRE+A RR +E EIRRE+I+EQELA  R   RT   L D+QFS++   Q  +N               S+SSPL     P          D++
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERT---LDDEQFSMKSSGQRMLNQ--------------SNSSPLRFLEPPKEATN-----DEE

Query:  KDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVE
        K+K I+LP+P+P +FE KRKA     E EA  V T+ K P  WI  K    EE  F C  C +  +S+ SF+AHL+GKKH AK   S +  E      ++
Subjt:  KDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVE

Query:  EEEEEEELEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM
        E+ + ++ +  K    ++NK  FKFWC+I +IGT  M +M
Subjt:  EEEEEEELEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM

TrEMBL top hitse value%identityAlignment
A0A1S3B9S7 uncharacterized protein LOC1034873438.75e-2035.8Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL
        R+KEEI +RE+  RR +E EIRRE+++E+ELAI RA  +T      D QF ++   +   R+L+ S+S+ L  +     + N +E+ KP        I L
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL

Query:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE
         RP+P +F  KRKA+     A A   G E        P  WI  K    EE  F C  C +  +S+ SF+AH+ GKKH+AK E  ++V +     P + E
Subjt:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE

Query:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM
        E+ +E     ++ I   P +E     KF CEI  +G   M VM
Subjt:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM

A0A3N7F770 Uncharacterized protein9.99e-1226.05Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN
        R++EEI  +EMAWRR++E E+RRE+++E+E+A +R       +E+ +M+   ++ L      NQ + S            + ++ PP         + + 
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN

Query:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------
        +  KDK I+L +P+P    AKRKA+ P  E+  E        PF  I KK K++    + C  C+++ +S+   + HL+G++H+AK              
Subjt:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKS-------------

Query:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI
              E +K    K+T+                                        V+ E++ ++LE++              PEI+ K  FKFWCE+
Subjt:  ------EASKKVVEKITV--------------------------------------TPVEEEEEEEELEEIKPG-----------PEIENKGFFKFWCEI

Query:  YQIGTQSMIVM
         QIG  S +VM
Subjt:  YQIGTQSMIVM

A0A5D3B800 UBP1-associated proteins 1C-like isoform X38.75e-2035.8Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL
        R+KEEI +RE+  RR +E EIRRE+++E+ELAI RA  +T      D QF ++   +   R+L+ S+S+ L  +     + N +E+ KP        I L
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLD----DEQFSMKSSGQ---RMLNQSNSSPLRFLEPPKEATNDEEKDKP--------ILL

Query:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE
         RP+P +F  KRKA+     A A   G E        P  WI  K    EE  F C  C +  +S+ SF+AH+ GKKH+AK E  ++V +     P + E
Subjt:  PRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKP-----PFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEE

Query:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM
        E+ +E     ++ I   P +E     KF CEI  +G   M VM
Subjt:  EEEEE-----LEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM

A0A6M2ER95 Uncharacterized protein1.38e-1131.18Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN
        R++EEI  +EMAWRR++E E+RRE+++E+E+A +R   R   +E+ +M+   ++ L      NQ + S            + ++ PP         + + 
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML------NQSNSS-----------PLRFLEPP--------KEATN

Query:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAK
        +  KDK I+L +P+P    AKRKA+ P  E   E        PF  I KK K++    + C  C+++ +S+   + HL+G++H+AK
Subjt:  DEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAK

A0A6N2MQQ7 Uncharacterized protein1.85e-1126.98Show/hide
Query:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML-----NQSNS-------------------------SPLRFL-EP
        R++EEI  +EMAWRR +EVE+RRE+++E+E+A+L     + ++     ++S Q +L     NQ +S                         S ++ L EP
Subjt:  RVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRML-----NQSNS-------------------------SPLRFL-EP

Query:  PKEATNDEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAK--------
          + + +  KDK I+L +P+P    AKRKA+ P T      VG   + PF  I KK K++    + C  C+++ +S+     HL+G++H+AK        
Subjt:  PKEATNDEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAEAVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAK--------

Query:  -------------SEASKKVVEKITVTPVEEEEEEEELEEIKPG---------------------------------------------PEIENKGFFKF
                     +  + K+    T   +E E E+E L+  K                                               PEI+ K  FKF
Subjt:  -------------SEASKKVVEKITVTPVEEEEEEEELEEIKPG---------------------------------------------PEIENKGFFKF

Query:  WCEIYQIGTQSMIVM
        WCE+ QIG  S +VM
Subjt:  WCEIYQIGTQSMIVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGCGGGTTAAAGAAGAGATAAGGATTAGAGAGATGGCTTGGCGGCGGAAGGTGGAGGTGGAGATTAGGAGGGAAATAATCATGGAGCAAGAACTAGCCATTCTTAGGGC
TGCTGAACGAACCCTAGATGATGAACAATTTTCCATGAAATCGAGTGGACAAAGAATGCTTAATCAGTCGAATTCGTCGCCACTTCGATTTCTGGAACCCCCAAAAGAGG
CTACGAATGATGAGGAAAAGGACAAGCCAATCCTTCTGCCAAGGCCAAACCCACAACGATTCGAAGCCAAGCGGAAAGCCATGAGACCACCTACAGAAGCCGAGGCAGAG
GCTGTCGGTACCGAACCCAAGCCGCCATTTGGCTGGATTTTGAAGAAAGCCAAGAAAGATGAGGAAGATAATTTTTTCTGTAAGACGTGCAAAATTACAACTTCGAGCCA
GACAAGTTTCGATGCCCATTTGCGAGGCAAAAAGCACCAAGCAAAATCAGAAGCAAGTAAGAAAGTAGTAGAGAAGATCACAGTGACCCCTGTGGAAGAAGAAGAAGAAG
AAGAAGAACTTGAAGAAATTAAACCGGGCCCTGAAATTGAAAACAAGGGGTTCTTCAAATTCTGGTGCGAAATCTACCAAATTGGAACTCAGAGTATGATCGTTATG
mRNA sequenceShow/hide mRNA sequence
CGGCGGGTTAAAGAAGAGATAAGGATTAGAGAGATGGCTTGGCGGCGGAAGGTGGAGGTGGAGATTAGGAGGGAAATAATCATGGAGCAAGAACTAGCCATTCTTAGGGC
TGCTGAACGAACCCTAGATGATGAACAATTTTCCATGAAATCGAGTGGACAAAGAATGCTTAATCAGTCGAATTCGTCGCCACTTCGATTTCTGGAACCCCCAAAAGAGG
CTACGAATGATGAGGAAAAGGACAAGCCAATCCTTCTGCCAAGGCCAAACCCACAACGATTCGAAGCCAAGCGGAAAGCCATGAGACCACCTACAGAAGCCGAGGCAGAG
GCTGTCGGTACCGAACCCAAGCCGCCATTTGGCTGGATTTTGAAGAAAGCCAAGAAAGATGAGGAAGATAATTTTTTCTGTAAGACGTGCAAAATTACAACTTCGAGCCA
GACAAGTTTCGATGCCCATTTGCGAGGCAAAAAGCACCAAGCAAAATCAGAAGCAAGTAAGAAAGTAGTAGAGAAGATCACAGTGACCCCTGTGGAAGAAGAAGAAGAAG
AAGAAGAACTTGAAGAAATTAAACCGGGCCCTGAAATTGAAAACAAGGGGTTCTTCAAATTCTGGTGCGAAATCTACCAAATTGGAACTCAGAGTATGATCGTTATG
Protein sequenceShow/hide protein sequence
RRVKEEIRIREMAWRRKVEVEIRREIIMEQELAILRAAERTLDDEQFSMKSSGQRMLNQSNSSPLRFLEPPKEATNDEEKDKPILLPRPNPQRFEAKRKAMRPPTEAEAE
AVGTEPKPPFGWILKKAKKDEEDNFFCKTCKITTSSQTSFDAHLRGKKHQAKSEASKKVVEKITVTPVEEEEEEEELEEIKPGPEIENKGFFKFWCEIYQIGTQSMIVM