; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0557 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0557
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSerine-rich protein-related
Genome locationMC06:4544514..4544810
RNA-Seq ExpressionMC06g0557
SyntenyMC06g0557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134810.1 uncharacterized protein LOC111006991 [Momordica charantia]1.77e-63100Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]8.12e-4677.78Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S    R+CLCSPT HPGSFRCS HRNRRKV + +SSSSIAAI+TAQL L MLAKANALR+FL QII PS  D QRRRNF P+PSRFCLMNNHGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]5.72e-4675.76Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S  S R+CLCSPT HPGSFRCSFHRNRRK  + +SSSSI AI++AQL+L + AKANA+RAFLL II+PS ND QRRRNF+PRPSRFCLMN HGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

XP_023003805.1 uncharacterized protein LOC111497277 [Cucurbita maxima]1.64e-4575.76Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S  S R+CLCSPT HPGSFRCSFHRNRRK  + +SSSSI+AI++AQL+L + AKANA+RAFLL II+PS ND QRRRNF PRPSRFCLMN HGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]9.89e-4778.79Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S    R+CLCSPT HPGSFRCS HRNRRKV + +SSSSIAAI+TAQL L MLAKANALR+FLLQII PS  D QRRRNF P+PSRFCLMNNHGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein3.95e-4173.2Show/hide
Query:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSA-TSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        + R+CLCSPT HPGSFRCSFHRNR K+ S+ +SSSS++ I+TA L+   LAKANALR+FLLQ+IKPS ND QRRRNF+PRPSRFCLMN+H TGLAVS
Subjt:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSA-TSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

A0A6J1BZD6 uncharacterized protein LOC1110069918.59e-64100Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

A0A6J1E1K3 uncharacterized protein LOC1114299443.93e-4677.78Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S    R+CLCSPT HPGSFRCS HRNRRKV + +SSSSIAAI+TAQL L MLAKANALR+FL QII PS  D QRRRNF P+PSRFCLMNNHGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

A0A6J1EG01 uncharacterized protein LOC1114339802.77e-4675.76Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S  S R+CLCSPT HPGSFRCSFHRNRRK  + +SSSSI AI++AQL+L + AKANA+RAFLL II+PS ND QRRRNF+PRPSRFCLMN HGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

A0A6J1KSU0 uncharacterized protein LOC1114972777.93e-4675.76Show/hide
Query:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS
        S  S R+CLCSPT HPGSFRCSFHRNRRK  + +SSSSI+AI++AQL+L + AKANA+RAFLL II+PS ND QRRRNF PRPSRFCLMN HGTGLAVS
Subjt:  SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein1.5e-0455.56Show/hide
Query:  SKRRCLCSPTNHPGSFRCSFHRN----RRKVVSATS
        +K  CLCSPT HPGSFRC  HR+    R K + A S
Subjt:  SKRRCLCSPTNHPGSFRCSFHRN----RRKVVSATS

AT5G11090.1 serine-rich protein-related2.4e-1038.95Show/hide
Query:  RRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLM
        RRC+CSPT HPGSFRCS H+N    V+       A+ +T  L++   A  N+L           R  L  +I+PS +  +RR  + PRPSR  +M
Subjt:  RRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLM

AT5G20370.1 serine-rich protein-related2.6e-0939.42Show/hide
Query:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAIS---------TAQLDLAMLAKANAL------------RAFLLQIIKPSGNDPQRRRNFNPR
        +KR+CLCSPT HPGSFRCSFHR      S T +SS    +            L+L  LA  N+L            R+    + KPS     RR  F PR
Subjt:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAIS---------TAQLDLAMLAKANAL------------RAFLLQIIKPSGNDPQRRRNFNPR

Query:  PSRF
         SRF
Subjt:  PSRF

AT5G25280.1 serine-rich protein-related9.0e-1037.76Show/hide
Query:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMN
        S+RRC+CSPT HPGSFRCS H+N    V+       A+ +T  L++   A  N+L           R  L  +I+PS +  +RR  + PR SR   M+
Subjt:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMN

AT5G25280.2 serine-rich protein-related9.0e-1037.76Show/hide
Query:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMN
        S+RRC+CSPT HPGSFRCS H+N    V+       A+ +T  L++   A  N+L           R  L  +I+PS +  +RR  + PR SR   M+
Subjt:  SKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANAL-----------RAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGCCCCCTCCAAACGCAGGTGCCTCTGTTCTCCGACCAACCATCCCGGCTCTTTCCGCTGCAGTTTTCATCGGAACCGCCGCAAGGTCGTCTCCGCTACGTCCTCATC
CTCCATTGCTGCCATTTCCACTGCGCAATTGGATCTCGCGATGTTGGCGAAGGCGAACGCGCTGAGGGCGTTTCTTCTGCAGATCATCAAGCCGTCGGGTAACGATCCTC
AGCGGCGGAGGAATTTCAACCCGAGGCCTTCCAGGTTTTGCTTGATGAACAATCATGGAACAGGATTGGCTGTTTCT
mRNA sequenceShow/hide mRNA sequence
TCTGCCCCCTCCAAACGCAGGTGCCTCTGTTCTCCGACCAACCATCCCGGCTCTTTCCGCTGCAGTTTTCATCGGAACCGCCGCAAGGTCGTCTCCGCTACGTCCTCATC
CTCCATTGCTGCCATTTCCACTGCGCAATTGGATCTCGCGATGTTGGCGAAGGCGAACGCGCTGAGGGCGTTTCTTCTGCAGATCATCAAGCCGTCGGGTAACGATCCTC
AGCGGCGGAGGAATTTCAACCCGAGGCCTTCCAGGTTTTGCTTGATGAACAATCATGGAACAGGATTGGCTGTTTCT
Protein sequenceShow/hide protein sequence
SAPSKRRCLCSPTNHPGSFRCSFHRNRRKVVSATSSSSIAAISTAQLDLAMLAKANALRAFLLQIIKPSGNDPQRRRNFNPRPSRFCLMNNHGTGLAVS